Examples with ConstantLogisticModel dr.evomodel.coalescent.ConstantLogisticModel used on opensource projects

Example 1 with ConstantLogisticModel

use of dr.evomodel.coalescent.ConstantLogisticModel in project beast-mcmc by beast-dev.

the class ConstantLogisticModelParser method parseXMLObject.

public Object parseXMLObject(XMLObject xo) throws XMLParseException {
    Units.Type units = XMLUnits.Utils.getUnitsAttr(xo);
    XMLObject cxo = xo.getChild(POPULATION_SIZE);
    Parameter N0Param = (Parameter) cxo.getChild(Parameter.class);
    cxo = xo.getChild(ANCESTRAL_POPULATION_SIZE);
    Parameter N1Param = (Parameter) cxo.getChild(Parameter.class);
    cxo = xo.getChild(GROWTH_RATE);
    Parameter rParam = (Parameter) cxo.getChild(Parameter.class);
    cxo = xo.getChild(SHAPE);
    Parameter cParam = (Parameter) cxo.getChild(Parameter.class);
    double alpha = xo.getDoubleAttribute(ALPHA);
    return new ConstantLogisticModel(N0Param, N1Param, rParam, cParam, alpha, units);
}