Examples with ScaledPiecewiseModel dr.evomodel.coalescent.ScaledPiecewiseModel used on opensource projects

Example 1 with ScaledPiecewiseModel

use of dr.evomodel.coalescent.ScaledPiecewiseModel in project beast-mcmc by beast-dev.

the class ScaledPiecewiseModelParser method parseXMLObject.

public Object parseXMLObject(XMLObject xo) throws XMLParseException {
    Units.Type units = XMLUnits.Utils.getUnitsAttr(xo);
    XMLObject cxo = xo.getChild(EPOCH_SIZES);
    Parameter epochSizes = (Parameter) cxo.getChild(Parameter.class);
    cxo = xo.getChild(TREE_MODEL);
    TreeModel treeModel = (TreeModel) cxo.getChild(TreeModel.class);
    boolean isLinear = xo.getBooleanAttribute("linear");
    return new ScaledPiecewiseModel(epochSizes, treeModel, isLinear, units);
}