Examples with DvObject edu.harvard.iq.dataverse.DvObject used on opensource projects

Example 1 with DvObject

use of edu.harvard.iq.dataverse.DvObject in project dataverse by IQSS.

the class ReturnDatasetToAuthorCommandTest method setUp.

@Before
public void setUp() {
    dataset = new Dataset();
    HttpServletRequest aHttpServletRequest = null;
    dataverseRequest = new DataverseRequest(MocksFactory.makeAuthenticatedUser("First", "Last"), aHttpServletRequest);
    testEngine = new TestDataverseEngine(new TestCommandContext() {

        @Override
        public AuthenticationServiceBean authentication() {
            return new AuthenticationServiceBean() {

                @Override
                public AuthenticatedUser getAuthenticatedUser(String id) {
                    return MocksFactory.makeAuthenticatedUser("First", "Last");
                }
            };
        }

        @Override
        public IndexServiceBean index() {
            return new IndexServiceBean() {

                @Override
                public Future<String> indexDataset(Dataset dataset, boolean doNormalSolrDocCleanUp) {
                    return null;
                }
            };
        }

        @Override
        public EntityManager em() {
            return new NoOpTestEntityManager();
        }

        @Override
        public DatasetServiceBean datasets() {
            return new DatasetServiceBean() {

                {
                    em = new NoOpTestEntityManager();
                }

                @Override
                public DatasetVersionUser getDatasetVersionUser(DatasetVersion version, User user) {
                    return null;
                }

                @Override
                public WorkflowComment addWorkflowComment(WorkflowComment comment) {
                    return comment;
                }

                @Override
                public void removeDatasetLocks(Long datasetId, DatasetLock.Reason aReason) {
                }
            };
        }

        @Override
        public DataverseRoleServiceBean roles() {
            return new DataverseRoleServiceBean() {

                @Override
                public DataverseRole findBuiltinRoleByAlias(String alias) {
                    return new DataverseRole();
                }

                @Override
                public RoleAssignment save(RoleAssignment assignment) {
                    // no-op
                    return assignment;
                }
            };
        }

        @Override
        public PermissionServiceBean permissions() {
            return new PermissionServiceBean() {

                @Override
                public List<AuthenticatedUser> getUsersWithPermissionOn(Permission permission, DvObject dvo) {
                    // We only need permissions for notifications, which we are testing in InReviewWorkflowIT.
                    return Collections.emptyList();
                }
            };
        }
    });
}

Example 2 with DvObject

use of edu.harvard.iq.dataverse.DvObject in project dataverse by IQSS.

the class GroupServiceBean method groupTransitiveClosure.

/**
 * Given a set of groups and a DV object, return all the groups that are
 * reachable from the set. Effectively, if the initial set has an {@link ExplicitGroup},
 * recursively add all the groups it contains.
 *
 * @param groups
 * @param dvo
 * @return All the groups included in the groups in {@code groups}.
 */
private Set<Group> groupTransitiveClosure(Set<Group> groups, DvObject dvo) {
    // now, get the explicit group transitive closure.
    Set<ExplicitGroup> perimeter = new HashSet<>();
    Set<ExplicitGroup> visited = new HashSet<>();
    groups.stream().filter((g) -> (g instanceof ExplicitGroup)).forEachOrdered((g) -> perimeter.add((ExplicitGroup) g));
    visited.addAll(perimeter);
    while (!perimeter.isEmpty()) {
        ExplicitGroup g = perimeter.iterator().next();
        perimeter.remove(g);
        groups.add(g);
        Set<ExplicitGroup> discovered = explicitGroupProvider.groupsFor(g, dvo);
        // Ideally the conjunction is always empty, as we don't allow cycles.
        discovered.removeAll(visited);
        // Still, coding defensively here, in case someone gets too
        // smart on the SQL console.
        perimeter.addAll(discovered);
        visited.addAll(discovered);
    }
    return groups;
}

Example 3 with DvObject

use of edu.harvard.iq.dataverse.DvObject in project dataverse by IQSS.

the class IndexAsync method indexRoles.

@Asynchronous
public void indexRoles(Collection<DvObject> dvObjects) {
    for (DvObject dvObject : dvObjects) {
        IndexResponse indexResponse = solrIndexService.indexPermissionsOnSelfAndChildren(dvObject);
        logger.fine("output from permission indexing operations (dvobject " + dvObject.getId() + ": " + indexResponse);
    }
}

Example 4 with DvObject

use of edu.harvard.iq.dataverse.DvObject in project dataverse by IQSS.

the class Index method searchPermsDebug.

/**
 * This method is for integration tests of search.
 */
@GET
@Path("permsDebug")
public Response searchPermsDebug(@QueryParam("key") String apiToken, @QueryParam("id") Long dvObjectId) {
    User user = findUserByApiToken(apiToken);
    if (user == null) {
        return error(Response.Status.UNAUTHORIZED, "Invalid apikey '" + apiToken + "'");
    }
    DvObject dvObjectToLookUp = dvObjectService.findDvObject(dvObjectId);
    if (dvObjectToLookUp == null) {
        return error(Status.BAD_REQUEST, "Could not find DvObject based on id " + dvObjectId);
    }
    List<DvObjectSolrDoc> solrDocs = SolrIndexService.determineSolrDocs(dvObjectToLookUp);
    JsonObjectBuilder data = Json.createObjectBuilder();
    JsonArrayBuilder permissionsData = Json.createArrayBuilder();
    for (DvObjectSolrDoc solrDoc : solrDocs) {
        JsonObjectBuilder dataDoc = Json.createObjectBuilder();
        dataDoc.add(SearchFields.ID, solrDoc.getSolrId());
        dataDoc.add(SearchFields.NAME_SORT, solrDoc.getNameOrTitle());
        JsonArrayBuilder perms = Json.createArrayBuilder();
        for (String perm : solrDoc.getPermissions()) {
            perms.add(perm);
        }
        dataDoc.add(SearchFields.DISCOVERABLE_BY, perms);
        permissionsData.add(dataDoc);
    }
    data.add("perms", permissionsData);
    DvObject dvObject = dvObjectService.findDvObject(dvObjectId);
    NullSafeJsonBuilder timestamps = jsonObjectBuilder();
    timestamps.add(contentChanged, SearchUtil.getTimestampOrNull(dvObject.getModificationTime()));
    timestamps.add(contentIndexed, SearchUtil.getTimestampOrNull(dvObject.getIndexTime()));
    timestamps.add(permsChanged, SearchUtil.getTimestampOrNull(dvObject.getPermissionModificationTime()));
    timestamps.add(permsIndexed, SearchUtil.getTimestampOrNull(dvObject.getPermissionIndexTime()));
    Set<RoleAssignment> roleAssignments = rolesSvc.rolesAssignments(dvObject);
    JsonArrayBuilder roleAssignmentsData = Json.createArrayBuilder();
    for (RoleAssignment roleAssignment : roleAssignments) {
        roleAssignmentsData.add(roleAssignment.getRole() + " has been granted to " + roleAssignment.getAssigneeIdentifier() + " on " + roleAssignment.getDefinitionPoint());
    }
    data.add("timestamps", timestamps);
    data.add("roleAssignments", roleAssignmentsData);
    return ok(data);
}

Example 5 with DvObject

use of edu.harvard.iq.dataverse.DvObject in project dataverse by IQSS.

the class PrivateUrlUtilTest method testGetPrivateUrlUserFromRoleAssignmentAndAssigneeNonPrivateUrlUser.

@Test
public void testGetPrivateUrlUserFromRoleAssignmentAndAssigneeNonPrivateUrlUser() {
    DataverseRole aRole = null;
    RoleAssignee assignee = GuestUser.get();
    DvObject dataset = new Dataset();
    String privateUrlToken = "cd71e9d7-73a7-4ec8-b890-3d00499e8693";
    RoleAssignment assignment = new RoleAssignment(aRole, assignee, dataset, privateUrlToken);
    PrivateUrlUser privateUrl = PrivateUrlUtil.getPrivateUrlUserFromRoleAssignment(assignment, assignee);
    assertNull(privateUrl);
}