Examples with Tag edu.stanford.bmir.protege.web.shared.tag.Tag used on opensource projects

Example 1 with Tag

use of edu.stanford.bmir.protege.web.shared.tag.Tag in project webprotege by protegeproject.

the class EntitySearcher method toSearchResult.

private EntitySearchResult toSearchResult(Pattern searchPattern, SearchMatch ren) {
    OWLEntityData ed = ren.getEntityData();
    String rendering = ed.getBrowserText();
    StringBuilder highlighted = new StringBuilder();
    highlightSearchResult(searchPattern, rendering, highlighted);
    if (ren.getMatchType() == MatchType.IRI) {
        // Matched the IRI remainder
        highlighted.append("<div class=\"searchedIri\">");
        IRI iri = ed.getEntity().getIRI();
        highlightSearchResult(searchPattern, iri.toString(), highlighted);
        highlighted.append("</div>");
    }
    if (ren.getMatchType() == MatchType.TAG) {
        for (Tag tag : tagsByEntity.get(ed.getEntity())) {
            if (searchString.equalsIgnoreCase(tag.getLabel())) {
                highlighted.append("<div class='wp-tag wp-tag--inline-tag' style='display: inline-block; color: ").append(tag.getColor().getHex()).append("; background-color:").append(tag.getBackgroundColor().getHex()).append(";'>");
                highlighted.append(tag.getLabel());
                highlighted.append("</div>");
            }
        }
    }
    return new EntitySearchResult(ed, displayName(), highlighted.toString());
}

Example 2 with Tag

use of edu.stanford.bmir.protege.web.shared.tag.Tag in project webprotege by protegeproject.

the class EntitySearcher method performMatch.

@Nullable
private SearchMatch performMatch(@Nonnull OWLEntity e) {
    OWLEntityData rendering = renderingSupplier.getRendering(e);
    MatchType matchType = null;
    if (tagsByLabel.containsKey(searchString)) {
        for (Tag tag : tagsByEntity.get(e)) {
            if (tag.getLabel().equals(searchString)) {
                matchType = MatchType.TAG;
                break;
            }
        }
    }
    if (matchType == null) {
        matchType = MatchType.RENDERING;
        // All search words must be found
        for (String searchWord : searchWords) {
            if (!StringUtils.containsIgnoreCase(rendering.getBrowserText(), searchWord)) {
                matchType = null;
                break;
            }
        }
    }
    // If we didn't match the rendering then search the IRI remainder
    IRI entityIri = rendering.getEntity().getIRI();
    if (matchType == null && entityIri.toString().startsWith(Obo2OWLConstants.DEFAULT_IRI_PREFIX)) {
        matchType = MatchType.IRI;
        Optional<String> remainder = entityIri.getRemainder();
        if (remainder.isPresent()) {
            for (String searchWord : searchWords) {
                if (!StringUtils.containsIgnoreCase(remainder.get(), searchWord)) {
                    matchType = null;
                    break;
                }
            }
        }
    }
    if (matchType != null) {
        return new SearchMatch(searchWords, rendering, matchType);
    } else {
        return null;
    }
}

Example 3 with Tag

use of edu.stanford.bmir.protege.web.shared.tag.Tag in project webprotege by protegeproject.

the class EntitySearcher method invoke.

/**
 * Invokes the entity searcher to perform a search.
 */
public void invoke() {
    Stopwatch stopwatch = Stopwatch.createStarted();
    matchCounter.reset();
    searchCounter.reset();
    results.clear();
    tagsByLabel.clear();
    tagsManager.getProjectTags().forEach(tag -> tagsByLabel.put(tag.getLabel(), tag));
    tagsByEntity.clear();
    tagsByEntity.putAll(tagsManager.getTags(projectId));
    Pattern searchPattern = compileSearchPattern(searchWords);
    entityStreamSupplier.get().filter(this::isRequiredEntityType).peek(this::incrementSearchCounter).map(this::performMatch).filter(Objects::nonNull).peek(this::incrementMatchCounter).sorted().skip(skip).limit(limit).map(m -> toSearchResult(searchPattern, m)).forEach(results::add);
    logger.info(BROWSING, "{} {} Performed entity search for \"{}\".  Found {} matches in {} entities in {} ms.", projectId, userId, searchString, matchCounter.getCounter(), searchCounter.getCounter(), stopwatch.elapsed(TimeUnit.MILLISECONDS));
}

Example 4 with Tag

use of edu.stanford.bmir.protege.web.shared.tag.Tag in project webprotege by protegeproject.

the class TagRepository_IT method setUp.

@Before
public void setUp() throws Exception {
    client = createMongoClient();
    Morphia morphia = createMorphia();
    Datastore datastore = morphia.createDatastore(client, getTestDbName());
    repository = new TagRepository(datastore);
    repository.ensureIndexes();
    tagId = TagId.getId("12345678-1234-1234-1234-123456789abc");
    projectId = ProjectId.get("12345678-1234-1234-1234-123456789abc");
    tag = new Tag(tagId, projectId, THE_TAG_LABEL, THE_TAG_DESCRIPTION, COLOR, BG_COLOR);
    repository.saveTag(tag);
}

Example 5 with Tag

use of edu.stanford.bmir.protege.web.shared.tag.Tag in project webprotege by protegeproject.

the class TagRepository_IT method shouldNotSaveTagWithDuplicateLabel.

@Test(expected = DuplicateKeyException.class)
public void shouldNotSaveTagWithDuplicateLabel() {
    TagId otherTagId = TagId.getId("1234abcd-abcd-abcd-abcd-123456789abc");
    Tag otherTag = new Tag(otherTagId, projectId, THE_TAG_LABEL, THE_TAG_DESCRIPTION, COLOR, BG_COLOR);
    repository.saveTag(otherTag);
}