Examples with Localizable net.imglib2.Localizable used on opensource projects

Example 1 with Localizable

use of net.imglib2.Localizable in project imagej-ops by imagej.

the class ColocalisationTest method gaussianSmooth.

/**
 * Gaussian Smooth of the input image using intermediate float format.
 *
 * @param <T>
 * @param img
 * @param sigma
 * @return
 */
public static <T extends RealType<T> & NativeType<T>> Img<T> gaussianSmooth(RandomAccessibleInterval<T> img, double[] sigma) {
    Interval interval = Views.iterable(img);
    ImgFactory<T> outputFactory = new ArrayImgFactory<T>();
    final long[] dim = new long[img.numDimensions()];
    img.dimensions(dim);
    Img<T> output = outputFactory.create(dim, img.randomAccess().get().createVariable());
    final long[] pos = new long[img.numDimensions()];
    Arrays.fill(pos, 0);
    Localizable origin = new Point(pos);
    ImgFactory<FloatType> tempFactory = new ArrayImgFactory<FloatType>();
    RandomAccessible<T> input = Views.extendMirrorSingle(img);
    Gauss.inFloat(sigma, input, interval, output, origin, tempFactory);
    return output;
}