Examples with RealArithmeticMeanFunction net.imglib2.ops.function.real.RealArithmeticMeanFunction used on opensource projects

Example 1 with RealArithmeticMeanFunction

use of net.imglib2.ops.function.real.RealArithmeticMeanFunction in project imagej-plugins-commands by imagej.

the class MeasurementDemo method mean.

// -- MeasureTest methods --
protected void mean() {
    RealImageFunction<?, DoubleType> imgFunc = mSrv.imgFunction(dataset, new DoubleType());
    function = new RealArithmeticMeanFunction<DoubleType>(imgFunc);
    funcName = "Mean";
    calc();
}

Example 2 with RealArithmeticMeanFunction

use of net.imglib2.ops.function.real.RealArithmeticMeanFunction in project imagej-plugins-commands by imagej.

the class MeasurementDemo method example1.

// -- Other examples --
// standard ways of measuring various values.
// a basic measurement
private void example1() {
    Dataset ds = getTestData();
    DoubleType output = new DoubleType();
    RealImageFunction<?, DoubleType> imgFunc = mSrv.imgFunction(ds, output);
    RealArithmeticMeanFunction<DoubleType> meanFunc = new RealArithmeticMeanFunction<DoubleType>(imgFunc);
    PointSet region = new HyperVolumePointSet(Intervals.dimensionsAsLongArray(ds));
    mSrv.measure(meanFunc, region, output);
    System.out.println("arithmetic mean is " + output.getRealDouble());
}

Example 3 with RealArithmeticMeanFunction

use of net.imglib2.ops.function.real.RealArithmeticMeanFunction in project imagej-plugins-commands by imagej.

the class MeasurementDemo method example4.

// measuring multiple things at a time
private void example4() {
    Dataset ds = getTestData();
    DoubleType output = new DoubleType();
    RealImageFunction<?, DoubleType> imgFunc = mSrv.imgFunction(ds, output);
    RealArithmeticMeanFunction<DoubleType> meanFunc = new RealArithmeticMeanFunction<DoubleType>(imgFunc);
    RealMinFunction<DoubleType> minFunc = new RealMinFunction<DoubleType>(imgFunc);
    RealMaxFunction<DoubleType> maxFunc = new RealMaxFunction<DoubleType>(imgFunc);
    List<Function<PointSet, DoubleType>> funcList = new ArrayList<Function<PointSet, DoubleType>>();
    List<DoubleType> outputList = new ArrayList<DoubleType>();
    funcList.add(meanFunc);
    funcList.add(minFunc);
    funcList.add(maxFunc);
    outputList.add(new DoubleType());
    outputList.add(new DoubleType());
    outputList.add(new DoubleType());
    PointSet region = new HyperVolumePointSet(Intervals.dimensionsAsLongArray(ds));
    mSrv.measure(funcList, region, outputList);
    System.out.println("mean = " + outputList.get(0).getRealDouble());
    System.out.println("min = " + outputList.get(1).getRealDouble());
    System.out.println("max = " + outputList.get(2).getRealDouble());
}