Examples with Annotation ome.xml.model.Annotation used on opensource projects

Example 11 with Annotation

use of ome.xml.model.Annotation in project bioformats by openmicroscopy.

the class InOutCurrentTest method testValidPlateAnnotation.

@Test(dependsOnMethods = { "testValidPlateNode" })
public void testValidPlateAnnotation() {
    Annotation n = ome.getPlate(0).getLinkedAnnotation(0);
    assertNotNull(n);
    assertEquals(PLATE_ANNOTATION_ID, n.getID());
    assertEquals(n.getNamespace(), GENERAL_ANNOTATION_NAMESPACE);
    assertTrue(n instanceof TimestampAnnotation);
    TimestampAnnotation timestamp = (TimestampAnnotation) n;
    assertEquals(timestamp.getValue(), PLATE_ANNOTATION_VALUE);
}

Example 12 with Annotation

use of ome.xml.model.Annotation in project bioformats by openmicroscopy.

the class InOutCurrentTest method testValidLaserAnnotation.

@Test(dependsOnMethods = { "testValidLaserMetadata" }, enabled = false)
public void testValidLaserAnnotation() {
    Annotation n = ome.getInstrument(0).getLightSource(0).getLinkedAnnotation(0);
    assertNotNull(n);
    assertEquals(LIGHTSOURCE_LASER_ANNOTATION_ID, n.getID());
    assertEquals(n.getNamespace(), GENERAL_ANNOTATION_NAMESPACE);
    assertTrue(n instanceof CommentAnnotation);
    CommentAnnotation string = (CommentAnnotation) n;
    assertEquals(LIGHTSOURCE_LASER_ANNOTATION_VALUE, string.getValue());
}

Example 13 with Annotation

use of ome.xml.model.Annotation in project bioformats by openmicroscopy.

the class InOutCurrentTest method testValidObjectiveAnnotation.

@Test(dependsOnMethods = { "testValidObjectiveNode" })
public void testValidObjectiveAnnotation() {
    Annotation n = ome.getInstrument(0).getObjective(0).getLinkedAnnotation(0);
    assertNotNull(n);
    assertEquals(OBJECTIVE_ANNOTATION_ID, n.getID());
    assertEquals(n.getNamespace(), GENERAL_ANNOTATION_NAMESPACE);
    assertTrue(n instanceof CommentAnnotation);
    CommentAnnotation string = (CommentAnnotation) n;
    assertEquals(OBJECTIVE_ANNOTATION_VALUE, string.getValue());
}

Example 14 with Annotation

use of ome.xml.model.Annotation in project bioformats by openmicroscopy.

the class InOutCurrentTest method testValidEmissionFilterAnnotation.

@Test(dependsOnMethods = { "testValidEmissionFilterNode" })
public void testValidEmissionFilterAnnotation() {
    Annotation n = ome.getInstrument(0).getFilter(0).getLinkedAnnotation(0);
    assertNotNull(n);
    assertEquals(EM_FILTER_ANNOTATION_ID, n.getID());
    assertEquals(n.getNamespace(), GENERAL_ANNOTATION_NAMESPACE);
    assertTrue(n instanceof CommentAnnotation);
    CommentAnnotation string = (CommentAnnotation) n;
    assertEquals(EM_FILTER_ANNOTATION_VALUE, string.getValue());
}

Example 15 with Annotation

use of ome.xml.model.Annotation in project bioformats by openmicroscopy.

the class InOutCurrentTest method testValidChannelAnnotation.

@Test(dependsOnMethods = { "testValidChannelNode" })
public void testValidChannelAnnotation() {
    Channel c = ome.getImage(0).getPixels().getChannel(0);
    Annotation n = c.getLinkedAnnotation(0);
    assertNotNull(n);
    assertTrue(n instanceof XMLAnnotation);
    assertEquals(CHANNEL_ANNOTATION_ID, n.getID());
    assertEquals(n.getNamespace(), GENERAL_ANNOTATION_NAMESPACE);
    assertEquals(CHANNEL_ANNOTATION_VALUE, ((XMLAnnotation) n).getValue());
}