Examples with StudyUserRoleBean org.akaza.openclinica.bean.login.StudyUserRoleBean used on opensource projects

Example 66 with StudyUserRoleBean

use of org.akaza.openclinica.bean.login.StudyUserRoleBean in project OpenClinica by OpenClinica.

the class SDVController method mayProceed.

private boolean mayProceed(HttpServletRequest request) {
    StudyUserRoleBean currentRole = (StudyUserRoleBean) request.getSession().getAttribute("userRole");
    Role r = currentRole.getRole();
    if (r.equals(Role.STUDYDIRECTOR) || r.equals(Role.COORDINATOR) || r.equals(Role.MONITOR)) {
        return true;
    }
    return false;
}

Example 67 with StudyUserRoleBean

use of org.akaza.openclinica.bean.login.StudyUserRoleBean in project OpenClinica by OpenClinica.

the class StudyController method createNewSites.

/**
	 * @api {post} /pages/auth/api/v1/studies/:uniqueProtocolId/sites Create a site
	 * @apiName createNewSite
	 * @apiPermission Authenticate using api-key. admin
	 * @apiVersion 3.8.0
	 * @apiParam {String} uniqueProtococlId Study unique protocol ID.
	 * @apiParam {String} briefTitle Brief Title .
	 * @apiParam {String} principalInvestigator Principal Investigator Name.
	 * @apiParam {Integer} expectedTotalEnrollment Expected Total Enrollment number
	 * @apiParam {String} secondaryProtocolID Site Secondary Protocol Id  (Optional)
	 * @apiParam {Date} startDate Start date
	 * @apiParam {Date} protocolDateVerification protocol Verification date
	 * @apiParam {Array} assignUserRoles Assign Users to Roles for this Study.
	 * @apiGroup Site
	 * @apiHeader {String} api_key Users unique access-key.
	 * @apiDescription Create a Site
	 * @apiParamExample {json} Request-Example:
	 *                  {
	 *                  "briefTitle": "Site Protocol ID Name",
	 *                  "principalInvestigator": "Principal Investigator Name",
	 *                  "expectedTotalEnrollment": "10",
	 *                  "assignUserRoles": [
	 *                  { "username" : "userc", "role" : "Investigator"},
	 *                  { "username" : "userb", "role" : "Clinical Research Coordinator"},
	 *                  { "username" : "dm_normal", "role" : "Monitor"},
	 *                  { "username" : "sd_root", "role" : "Data Entry Person"}
	 *                  ],
	 *                  "uniqueProtocolID": "Site Protocol ID",
	 *                  "startDate": "2011-11-11",
	 *                  "secondaryProtocolID" : "Secondary Protocol ID 1" ,
	 *                  "protocolDateVerification" : "2011-10-14"
	 *                  }
	 *
	 * @apiErrorExample {json} Error-Response:
	 *                  HTTP/1.1 400 Bad Request
	 *                  {
	 *                  "message": "VALIDATION FAILED",
	 *                  "protocolDateVerification": "2011-10-14",
	 *                  "principalInvestigator": "Principal Investigator Name",
	 *                  "expectedTotalEnrollment": "10",
	 *                  "errors": [
	 *                  { "field": "UniqueProtocolId", "resource": "Site Object","code": "Unique Protocol Id exist in the System" }
	 *                  ],
	 *                  "secondaryProId": "Secondary Protocol ID 1",
	 *                  "siteOid": null,
	 *                  "briefTitle": "Site Protocol ID Name",
	 *                  "assignUserRoles": [
	 *                  { "role": "Investigator", "username": "userc"},
	 *                  { "role": "Clinical Research Coordinator", "username": "userb"},
	 *                  { "role": "Monitor","username": "dm_normal"},
	 *                  { "role": "Data Entry Person","username": "sd_root"}
	 *                  ],
	 *                  "uniqueSiteProtocolID": "Site Protocol ID",
	 *                  "startDate": "2011-11-11"
	 *                  }
	 * @apiSuccessExample {json} Success-Response:
	 *                    HTTP/1.1 200 OK
	 *                    {
	 *                    "message": "SUCCESS",
	 *                    "siteOid": "S_SITEPROT",
	 *                    "uniqueSiteProtocolID": "Site Protocol IDqq"
	 *                    }
	 */
@RequestMapping(value = "/{uniqueProtocolID}/sites", method = RequestMethod.POST)
public ResponseEntity<Object> createNewSites(HttpServletRequest request, @RequestBody HashMap<String, Object> map, @PathVariable("uniqueProtocolID") String uniqueProtocolID) throws Exception {
    System.out.println("I'm in Create Sites ");
    ArrayList<ErrorObject> errorObjects = new ArrayList();
    StudyBean siteBean = null;
    ResponseEntity<Object> response = null;
    String validation_failed_message = "VALIDATION FAILED";
    String validation_passed_message = "SUCCESS";
    String name = (String) map.get("briefTitle");
    String principalInvestigator = (String) map.get("principalInvestigator");
    String uniqueSiteProtocolID = (String) map.get("uniqueProtocolID");
    String expectedTotalEnrollment = (String) map.get("expectedTotalEnrollment");
    String startDate = (String) map.get("startDate");
    String protocolDateVerification = (String) map.get("protocolDateVerification");
    String secondaryProId = (String) map.get("secondaryProtocolID");
    ArrayList<UserRole> assignUserRoles = (ArrayList<UserRole>) map.get("assignUserRoles");
    ArrayList<UserRole> userList = new ArrayList<>();
    if (assignUserRoles != null) {
        for (Object userRole : assignUserRoles) {
            UserRole uRole = new UserRole();
            uRole.setUsername((String) ((HashMap<String, Object>) userRole).get("username"));
            uRole.setRole((String) ((HashMap<String, Object>) userRole).get("role"));
            udao = new UserAccountDAO(dataSource);
            UserAccountBean assignedUserBean = (UserAccountBean) udao.findByUserName(uRole.getUsername());
            if (assignedUserBean == null || !assignedUserBean.isActive()) {
                ErrorObject errorOBject = createErrorObject("Study Object", "The Assigned Username " + uRole.getUsername() + " is not a Valid User", "Assigned User");
                errorObjects.add(errorOBject);
            }
            ResourceBundle resterm = org.akaza.openclinica.i18n.util.ResourceBundleProvider.getTermsBundle();
            if (getSiteRole(uRole.getRole(), resterm) == null) {
                ErrorObject errorOBject = createErrorObject("Study Object", "Assigned Role for " + uRole.getUsername() + " is not a Valid Site Role", "Assigned Role");
                errorObjects.add(errorOBject);
            }
            userList.add(uRole);
        }
    }
    SiteDTO siteDTO = buildSiteDTO(uniqueSiteProtocolID, name, principalInvestigator, expectedTotalEnrollment, startDate, protocolDateVerification, secondaryProId, userList);
    if (uniqueSiteProtocolID == null) {
        ErrorObject errorOBject = createErrorObject("Site Object", "Missing Field", "UniqueProtocolID");
        errorObjects.add(errorOBject);
    } else {
        uniqueSiteProtocolID = uniqueSiteProtocolID.trim();
    }
    if (name == null) {
        ErrorObject errorOBject = createErrorObject("Site Object", "Missing Field", "BriefTitle");
        errorObjects.add(errorOBject);
    } else {
        name = name.trim();
    }
    if (principalInvestigator == null) {
        ErrorObject errorOBject = createErrorObject("Site Object", "Missing Field", "PrincipalInvestigator");
        errorObjects.add(errorOBject);
    } else {
        principalInvestigator = principalInvestigator.trim();
    }
    if (startDate == null) {
        ErrorObject errorOBject = createErrorObject("Site Object", "Missing Field", "StartDate");
        errorObjects.add(errorOBject);
    } else {
        startDate = startDate.trim();
    }
    if (protocolDateVerification == null) {
        ErrorObject errorOBject = createErrorObject("Site Object", "Missing Field", "ProtocolDateVerification");
        errorObjects.add(errorOBject);
    } else {
        protocolDateVerification = protocolDateVerification.trim();
    }
    if (expectedTotalEnrollment == null) {
        ErrorObject errorOBject = createErrorObject("Site Object", "Missing Field", "ExpectedTotalEnrollment");
        errorObjects.add(errorOBject);
    } else {
        expectedTotalEnrollment = expectedTotalEnrollment.trim();
    }
    if (secondaryProId != null) {
        secondaryProId = secondaryProId.trim();
    }
    if (assignUserRoles == null) {
        ErrorObject errorOBject = createErrorObject("Study Object", "Missing Field", "AssignUserRoles");
        errorObjects.add(errorOBject);
    }
    request.setAttribute("uniqueProId", uniqueSiteProtocolID);
    request.setAttribute("name", name);
    request.setAttribute("prinInvestigator", principalInvestigator);
    request.setAttribute("expectedTotalEnrollment", expectedTotalEnrollment);
    request.setAttribute("startDate", startDate);
    request.setAttribute("protocolDateVerification", protocolDateVerification);
    request.setAttribute("secondProId", secondaryProId);
    String format = "yyyy-MM-dd";
    SimpleDateFormat formatter = null;
    Date formattedStartDate = null;
    Date formattedProtocolDate = null;
    if (startDate != "" && startDate != null) {
        try {
            formatter = new SimpleDateFormat(format);
            formattedStartDate = formatter.parse(startDate);
        } catch (ParseException e) {
            ErrorObject errorOBject = createErrorObject("Site Object", "The StartDate format is not a valid 'yyyy-MM-dd' format", "StartDate");
            errorObjects.add(errorOBject);
        }
        if (formattedStartDate != null) {
            if (!startDate.equals(formatter.format(formattedStartDate))) {
                ErrorObject errorOBject = createErrorObject("Site Object", "The StartDate format is not a valid 'yyyy-MM-dd' format", "StartDate");
                errorObjects.add(errorOBject);
            }
        }
    }
    if (protocolDateVerification != "" && protocolDateVerification != null) {
        try {
            formatter = new SimpleDateFormat(format);
            formattedProtocolDate = formatter.parse(protocolDateVerification);
        } catch (ParseException e) {
            ErrorObject errorOBject = createErrorObject("Site Object", "The Protocol Verification Date format is not a valid 'yyyy-MM-dd' format", "ProtocolDateVerification");
            errorObjects.add(errorOBject);
        }
        if (formattedProtocolDate != null) {
            if (!protocolDateVerification.equals(formatter.format(formattedProtocolDate))) {
                ErrorObject errorOBject = createErrorObject("Site Object", "The Protocol Verification Date format is not a valid 'yyyy-MM-dd' format", "ProtocolDateVerification");
                errorObjects.add(errorOBject);
            }
        }
    }
    StudyBean parentStudy = getStudyByUniqId(uniqueProtocolID);
    if (parentStudy == null) {
        ErrorObject errorOBject = createErrorObject("Study Object", "The Study Protocol Id provided in the URL is not a valid Protocol Id", "Unique Study Protocol Id");
        errorObjects.add(errorOBject);
    } else if (parentStudy.getParentStudyId() != 0) {
        ErrorObject errorOBject = createErrorObject("Study Object", "The Study Protocol Id provided in the URL is not a valid Study Protocol Id", "Unique Study Protocol Id");
        errorObjects.add(errorOBject);
    }
    UserAccountBean ownerUserAccount = null;
    if (parentStudy != null) {
        ownerUserAccount = getSiteOwnerAccount(request, parentStudy);
        if (ownerUserAccount == null) {
            ErrorObject errorOBject = createErrorObject("Site Object", "The Owner User Account is not Valid Account or Does not have rights to Create Sites", "Owner Account");
            errorObjects.add(errorOBject);
        }
    }
    Validator v1 = new Validator(request);
    v1.addValidation("uniqueProId", Validator.NO_BLANKS);
    HashMap vError1 = v1.validate();
    if (!vError1.isEmpty()) {
        ErrorObject errorOBject = createErrorObject("Site Object", "This field cannot be blank.", "UniqueProtocolId");
        errorObjects.add(errorOBject);
    }
    Validator v2 = new Validator(request);
    v2.addValidation("name", Validator.NO_BLANKS);
    HashMap vError2 = v2.validate();
    if (!vError2.isEmpty()) {
        ErrorObject errorOBject = createErrorObject("Site Object", "This field cannot be blank.", "BriefTitle");
        errorObjects.add(errorOBject);
    }
    Validator v3 = new Validator(request);
    v3.addValidation("prinInvestigator", Validator.NO_BLANKS);
    HashMap vError3 = v3.validate();
    if (!vError3.isEmpty()) {
        ErrorObject errorOBject = createErrorObject("Site Object", "This field cannot be blank.", "PrincipleInvestigator");
        errorObjects.add(errorOBject);
    }
    Validator v6 = new Validator(request);
    HashMap vError6 = v6.validate();
    if (uniqueProtocolID != null)
        validateUniqueProId(request, vError6);
    if (!vError6.isEmpty()) {
        ErrorObject errorOBject = createErrorObject("Site Object", "Unique Protocol Id exist in the System", "UniqueProtocolId");
        errorObjects.add(errorOBject);
    }
    Validator v7 = new Validator(request);
    v7.addValidation("expectedTotalEnrollment", Validator.NO_BLANKS);
    HashMap vError7 = v7.validate();
    if (!vError7.isEmpty()) {
        ErrorObject errorOBject = createErrorObject("Site Object", "This field cannot be blank.", "ExpectedTotalEnrollment");
        errorObjects.add(errorOBject);
    }
    if (request.getAttribute("name") != null && ((String) request.getAttribute("name")).length() > 100) {
        ErrorObject errorOBject = createErrorObject("Site Object", "BriefTitle Length exceeds the max length 100", "BriefTitle");
        errorObjects.add(errorOBject);
    }
    if (request.getAttribute("uniqueProId") != null && ((String) request.getAttribute("uniqueProId")).length() > 30) {
        ErrorObject errorOBject = createErrorObject("Site Object", "UniqueProtocolId Length exceeds the max length 30", "UniqueProtocolId");
        errorObjects.add(errorOBject);
    }
    if (request.getAttribute("prinInvestigator") != null && ((String) request.getAttribute("prinInvestigator")).length() > 255) {
        ErrorObject errorOBject = createErrorObject("Site Object", "PrincipleInvestigator Length exceeds the max length 255", "PrincipleInvestigator");
        errorObjects.add(errorOBject);
    }
    if (request.getAttribute("expectedTotalEnrollment") != null && Integer.valueOf((String) request.getAttribute("expectedTotalEnrollment")) <= 0) {
        ErrorObject errorOBject = createErrorObject("Site Object", "ExpectedTotalEnrollment Length can't be negative", "ExpectedTotalEnrollment");
        errorObjects.add(errorOBject);
    }
    siteDTO.setErrors(errorObjects);
    if (errorObjects != null && errorObjects.size() != 0) {
        siteDTO.setMessage(validation_failed_message);
        response = new ResponseEntity(siteDTO, org.springframework.http.HttpStatus.BAD_REQUEST);
    } else {
        siteBean = buildSiteBean(uniqueSiteProtocolID, name, principalInvestigator, Integer.valueOf(expectedTotalEnrollment), formattedStartDate, formattedProtocolDate, secondaryProId, ownerUserAccount, parentStudy.getId());
        StudyBean sBean = createStudy(siteBean, ownerUserAccount);
        siteDTO.setSiteOid(sBean.getOid());
        siteDTO.setMessage(validation_passed_message);
        ResourceBundle resterm = org.akaza.openclinica.i18n.util.ResourceBundleProvider.getTermsBundle();
        StudyUserRoleBean sub = null;
        for (UserRole userRole : userList) {
            sub = new StudyUserRoleBean();
            sub.setRole(getSiteRole(userRole.getRole(), resterm));
            sub.setStudyId(sBean.getId());
            sub.setStatus(Status.AVAILABLE);
            sub.setOwner(ownerUserAccount);
            udao = new UserAccountDAO(dataSource);
            UserAccountBean assignedUserBean = (UserAccountBean) udao.findByUserName(userRole.getUsername());
            StudyUserRoleBean surb = createRole(assignedUserBean, sub);
        }
        ResponseSuccessSiteDTO responseSuccess = new ResponseSuccessSiteDTO();
        responseSuccess.setMessage(siteDTO.getMessage());
        responseSuccess.setSiteOid(siteDTO.getSiteOid());
        responseSuccess.setUniqueSiteProtocolID(siteDTO.getUniqueSiteProtocolID());
        response = new ResponseEntity(responseSuccess, org.springframework.http.HttpStatus.OK);
    }
    return response;
}

Example 68 with StudyUserRoleBean

use of org.akaza.openclinica.bean.login.StudyUserRoleBean in project OpenClinica by OpenClinica.

the class StudyController method createUserRole.

public StudyUserRoleBean createUserRole(UserAccountBean ownerUserAccount, StudyBean study) {
    udao = new UserAccountDAO(dataSource);
    StudyUserRoleBean surBean = udao.findRoleByUserNameAndStudyId(ownerUserAccount.getName(), study.getId());
    return surBean;
}

Example 69 with StudyUserRoleBean

use of org.akaza.openclinica.bean.login.StudyUserRoleBean in project OpenClinica by OpenClinica.

the class StudyController method createRole.

public StudyUserRoleBean createRole(UserAccountBean ownerUserAccount, StudyUserRoleBean sub) {
    udao = new UserAccountDAO(dataSource);
    StudyUserRoleBean studyUserRoleBean = (StudyUserRoleBean) udao.createStudyUserRole(ownerUserAccount, sub);
    return studyUserRoleBean;
}

Example 70 with StudyUserRoleBean

use of org.akaza.openclinica.bean.login.StudyUserRoleBean in project OpenClinica by OpenClinica.

the class StudyController method getSiteOwnerAccount.

public UserAccountBean getSiteOwnerAccount(HttpServletRequest request, StudyBean study) {
    UserAccountBean ownerUserAccount = (UserAccountBean) request.getSession().getAttribute("userBean");
    StudyUserRoleBean currentRole = createUserRole(ownerUserAccount, study);
    if (currentRole.getRole().equals(Role.STUDYDIRECTOR) || currentRole.getRole().equals(Role.COORDINATOR)) {
        return ownerUserAccount;
    }
    return null;
}