use of org.akaza.openclinica.bean.managestudy.PrintCRFBean in project OpenClinica by OpenClinica.
the class PrintAllEventCRFServlet method processRequest.
@Override
public void processRequest(HttpServletRequest request, HttpServletResponse response) throws Exception {
FormProcessor fp = new FormProcessor(request);
SessionManager sm = (SessionManager) request.getSession().getAttribute("sm");
EventCRFBean ecb = (EventCRFBean) request.getAttribute(INPUT_EVENT_CRF);
SectionBean sb = (SectionBean) request.getAttribute(SECTION_BEAN);
ArrayList<SectionBean> allSectionBeans;
// The PrintDataEntry servlet handles this parameter
boolean isSubmitted = false;
StudyEventDefinitionDAO sedao = new StudyEventDefinitionDAO(sm.getDataSource());
EventDefinitionCRFDAO edao = new EventDefinitionCRFDAO(sm.getDataSource());
EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(sm.getDataSource());
StudyDAO studyDao = new StudyDAO(sm.getDataSource());
StudyBean currentStudy = (StudyBean) request.getSession().getAttribute("study");
ArrayList<StudyEventDefinitionBean> seds = new ArrayList<StudyEventDefinitionBean>();
seds = sedao.findAllByStudy(currentStudy);
// ArrayList eventDefinitionCRFs = (ArrayList) edao.findAllByStudy(site);
CRFVersionDAO cvdao = new CRFVersionDAO(sm.getDataSource());
CRFDAO cdao = new CRFDAO(sm.getDataSource());
ArrayList<EventDefinitionCRFBean> edcs = new ArrayList();
for (StudyEventDefinitionBean sed : seds) {
int defId = sed.getId();
edcs.addAll(edcdao.findAllByDefinition(currentStudy, defId));
}
Map eventDefinitionDefaultVersions = new LinkedHashMap();
for (int i = 0; i < edcs.size(); i++) {
EventDefinitionCRFBean edc = edcs.get(i);
ArrayList versions = (ArrayList) cvdao.findAllByCRF(edc.getCrfId());
edc.setVersions(versions);
CRFBean crf = (CRFBean) cdao.findByPK(edc.getCrfId());
// edc.setCrfLabel(crf.getLabel());
edc.setCrfName(crf.getName());
// to show/hide edit action on jsp page
if (crf.getStatus().equals(Status.AVAILABLE)) {
edc.setOwner(crf.getOwner());
}
CRFVersionBean defaultVersion = (CRFVersionBean) cvdao.findByPK(edc.getDefaultVersionId());
StudyEventDefinitionBean studyEventDefinitionBean = (StudyEventDefinitionBean) sedao.findByPK(edc.getStudyEventDefinitionId());
edc.setDefaultVersionName(defaultVersion.getName());
if (defaultVersion.getStatus().isAvailable()) {
List list = (ArrayList) eventDefinitionDefaultVersions.get(studyEventDefinitionBean);
if (list == null)
list = new ArrayList();
list.add(defaultVersion);
eventDefinitionDefaultVersions.put(studyEventDefinitionBean, list);
}
}
// Whether IE6 or IE7 is involved
String isIE = fp.getString("ie");
if ("y".equalsIgnoreCase(isIE)) {
request.setAttribute("isInternetExplorer", "true");
}
SectionDAO sdao = new SectionDAO(sm.getDataSource());
CRFVersionDAO crfVersionDAO = new CRFVersionDAO(sm.getDataSource());
CRFDAO crfDao = new CRFDAO(sm.getDataSource());
Map sedCrfBeans = null;
for (Iterator it = eventDefinitionDefaultVersions.keySet().iterator(); it.hasNext(); ) {
if (sedCrfBeans == null)
sedCrfBeans = new LinkedHashMap();
StudyEventDefinitionBean sedBean = (StudyEventDefinitionBean) it.next();
List crfVersions = (ArrayList) eventDefinitionDefaultVersions.get(sedBean);
for (Iterator crfIt = crfVersions.iterator(); crfIt.hasNext(); ) {
CRFVersionBean crfVersionBean = (CRFVersionBean) crfIt.next();
allSectionBeans = new ArrayList<SectionBean>();
ArrayList sectionBeans = new ArrayList();
ItemGroupDAO itemGroupDao = new ItemGroupDAO(sm.getDataSource());
// Find truely grouped tables, not groups with a name of 'Ungrouped'
List<ItemGroupBean> itemGroupBeans = itemGroupDao.findOnlyGroupsByCRFVersionID(crfVersionBean.getId());
CRFBean crfBean = crfDao.findByVersionId(crfVersionBean.getId());
if (itemGroupBeans.size() > 0) {
// get a DisplaySectionBean for each section of the CRF, sort
// them, then
// dispatch the request to a print JSP. The constructor for this
// handler takes
// a boolean value depending on whether data is involved or not
// ('false' in terms of this
// servlet; see PrintDataEntryServlet).
DisplaySectionBeanHandler handler = new DisplaySectionBeanHandler(false, getDataSource(), getServletContext());
handler.setCrfVersionId(crfVersionBean.getId());
// handler.setEventCRFId(eventCRFId);
List<DisplaySectionBean> displaySectionBeans = handler.getDisplaySectionBeans();
request.setAttribute("listOfDisplaySectionBeans", displaySectionBeans);
// Make available the CRF names and versions for
// the web page's header
CRFVersionBean crfverBean = (CRFVersionBean) crfVersionDAO.findByPK(crfVersionBean.getId());
request.setAttribute("crfVersionBean", crfverBean);
request.setAttribute("crfBean", crfBean);
// Set an attribute signaling that data is not involved
request.setAttribute("dataInvolved", "false");
PrintCRFBean printCrfBean = new PrintCRFBean();
printCrfBean.setDisplaySectionBeans(displaySectionBeans);
printCrfBean.setCrfVersionBean(crfVersionBean);
printCrfBean.setCrfBean(crfBean);
printCrfBean.setEventCrfBean(ecb);
printCrfBean.setGrouped(true);
List list = (ArrayList) sedCrfBeans.get(sedBean);
if (list == null)
list = new ArrayList();
list.add(printCrfBean);
sedCrfBeans.put(sedBean, list);
continue;
}
ecb = new EventCRFBean();
ecb.setCRFVersionId(crfVersionBean.getId());
CRFVersionBean version = (CRFVersionBean) crfVersionDAO.findByPK(crfVersionBean.getId());
ArrayList sects = (ArrayList) sdao.findByVersionId(version.getId());
for (int i = 0; i < sects.size(); i++) {
sb = (SectionBean) sects.get(i);
// super.sb = sb;
int sectId = sb.getId();
if (sectId > 0) {
allSectionBeans.add((SectionBean) sdao.findByPK(sectId));
}
}
request.setAttribute(INPUT_EVENT_CRF, ecb);
request.setAttribute(SECTION_BEAN, sb);
request.setAttribute(ALL_SECTION_BEANS, allSectionBeans);
sectionBeans = super.getAllDisplayBeans(request);
DisplaySectionBean dsb = super.getDisplayBean(false, false, request, isSubmitted);
PrintCRFBean printCrfBean = new PrintCRFBean();
printCrfBean.setAllSections(sectionBeans);
printCrfBean.setDisplaySectionBean(dsb);
printCrfBean.setEventCrfBean(ecb);
printCrfBean.setCrfVersionBean(crfVersionBean);
printCrfBean.setCrfBean(crfBean);
printCrfBean.setGrouped(false);
List list = (ArrayList) sedCrfBeans.get(sedBean);
if (list == null)
list = new ArrayList();
list.add(printCrfBean);
sedCrfBeans.put(sedBean, list);
}
}
request.setAttribute("sedCrfBeans", sedCrfBeans);
request.setAttribute("studyName", currentStudy.getName());
forwardPage(Page.VIEW_ALL_DEFAULT_CRF_VERSIONS_PRINT, request, response);
}
use of org.akaza.openclinica.bean.managestudy.PrintCRFBean in project OpenClinica by OpenClinica.
the class PrintEventCRFServlet method processRequest.
@Override
public void processRequest(HttpServletRequest request, HttpServletResponse response) throws Exception {
FormProcessor fp = new FormProcessor(request);
StudyBean currentStudy = (StudyBean) request.getSession().getAttribute("study");
SectionBean sb = (SectionBean) request.getAttribute(SECTION_BEAN);
// The PrintDataEntry servlet handles this parameter
int eventCRFId = fp.getInt("ecId");
// JN:The following were the the global variables, moved as local.
EventCRFBean ecb = (EventCRFBean) request.getAttribute(INPUT_EVENT_CRF);
StudyEventDefinitionDAO sedao = new StudyEventDefinitionDAO(getDataSource());
int defId = fp.getInt("id", true);
boolean isSubmitted = false;
ArrayList<SectionBean> allSectionBeans;
if (defId == 0) {
addPageMessage(respage.getString("please_choose_a_definition_to_view"), request);
forwardPage(Page.LIST_DEFINITION_SERVLET, request, response);
} else {
// definition id
StudyEventDefinitionBean sed = (StudyEventDefinitionBean) sedao.findByPK(defId);
EventDefinitionCRFDAO edao = new EventDefinitionCRFDAO(getDataSource());
ArrayList eventDefinitionCRFs = (ArrayList) edao.findAllByDefinition(defId);
CRFVersionDAO cvdao = new CRFVersionDAO(getDataSource());
CRFDAO cdao = new CRFDAO(getDataSource());
ArrayList defaultVersions = new ArrayList();
for (int i = 0; i < eventDefinitionCRFs.size(); i++) {
EventDefinitionCRFBean edc = (EventDefinitionCRFBean) eventDefinitionCRFs.get(i);
ArrayList versions = (ArrayList) cvdao.findAllByCRF(edc.getCrfId());
edc.setVersions(versions);
CRFBean crf = (CRFBean) cdao.findByPK(edc.getCrfId());
// edc.setCrfLabel(crf.getLabel());
edc.setCrfName(crf.getName());
// to show/hide edit action on jsp page
if (crf.getStatus().equals(Status.AVAILABLE)) {
edc.setOwner(crf.getOwner());
}
CRFVersionBean defaultVersion = (CRFVersionBean) cvdao.findByPK(edc.getDefaultVersionId());
// There could be separate EventDefinitionCRF objects with same default version id.
if (defaultVersions.contains(defaultVersion)) {
continue;
}
edc.setDefaultVersionName(defaultVersion.getName());
if (edc.getStatus().isAvailable()) {
defaultVersions.add(defaultVersion);
}
}
// Whether IE6 or IE7 is involved
String isIE = fp.getString("ie");
if ("y".equalsIgnoreCase(isIE)) {
request.setAttribute("isInternetExplorer", "true");
}
int eventDefinitionCRFId = fp.getInt("eventDefinitionCRFId");
// EventDefinitionCRFDao findByStudyEventIdAndCRFVersionId(int
// studyEventId, int crfVersionId)
SectionDAO sdao = new SectionDAO(getDataSource());
CRFVersionDAO crfVersionDAO = new CRFVersionDAO(getDataSource());
CRFDAO crfDao = new CRFDAO(getDataSource());
ArrayList printCrfBeans = new ArrayList();
for (Iterator it = defaultVersions.iterator(); it.hasNext(); ) {
allSectionBeans = new ArrayList<SectionBean>();
ArrayList sectionBeans = new ArrayList();
CRFVersionBean crfVersionBean = (CRFVersionBean) it.next();
// The existing application doesn't print null values, even if they are
// defined in the event definition
// int crfVersionId = fp.getInt("id");
// BWP 2/7/2008>> Find out if the CRF has grouped tables, and if so,
// use
// that dedicated JSP
ItemGroupDAO itemGroupDao = new ItemGroupDAO(getDataSource());
// Find truely grouped tables, not groups with a name of 'Ungrouped'
List<ItemGroupBean> itemGroupBeans = itemGroupDao.findOnlyGroupsByCRFVersionID(crfVersionBean.getId());
CRFBean crfBean = crfDao.findByVersionId(crfVersionBean.getId());
if (itemGroupBeans.size() > 0) {
// get a DisplaySectionBean for each section of the CRF, sort
// them, then
// dispatch the request to a print JSP. The constructor for this
// handler takes
// a boolean value depending on whether data is involved or not
// ('false' in terms of this
// servlet; see PrintDataEntryServlet).
DisplaySectionBeanHandler handler = new DisplaySectionBeanHandler(false, getDataSource(), getServletContext());
handler.setCrfVersionId(crfVersionBean.getId());
handler.setEventCRFId(eventCRFId);
List<DisplaySectionBean> displaySectionBeans = handler.getDisplaySectionBeans();
request.setAttribute("listOfDisplaySectionBeans", displaySectionBeans);
// Make available the CRF names and versions for
// the web page's header
CRFVersionBean crfverBean = (CRFVersionBean) crfVersionDAO.findByPK(crfVersionBean.getId());
request.setAttribute("crfVersionBean", crfverBean);
request.setAttribute("crfBean", crfBean);
// Set an attribute signaling that data is not involved
request.setAttribute("dataInvolved", "false");
PrintCRFBean printCrfBean = new PrintCRFBean();
printCrfBean.setDisplaySectionBeans(displaySectionBeans);
printCrfBean.setCrfVersionBean(crfVersionBean);
printCrfBean.setCrfBean(crfBean);
printCrfBean.setEventCrfBean(ecb);
printCrfBeans.add(printCrfBean);
printCrfBean.setGrouped(true);
// IllegalStateException
continue;
}
ecb = new EventCRFBean();
ecb.setCRFVersionId(crfVersionBean.getId());
CRFVersionBean version = (CRFVersionBean) crfVersionDAO.findByPK(crfVersionBean.getId());
ArrayList sects = (ArrayList) sdao.findByVersionId(version.getId());
for (int i = 0; i < sects.size(); i++) {
sb = (SectionBean) sects.get(i);
// super.sb = sb;
int sectId = sb.getId();
if (sectId > 0) {
allSectionBeans.add((SectionBean) sdao.findByPK(sectId));
}
}
request.setAttribute(ALL_SECTION_BEANS, allSectionBeans);
request.setAttribute(INPUT_EVENT_CRF, ecb);
sectionBeans = super.getAllDisplayBeans(request);
request.setAttribute(SECTION_BEAN, sb);
DisplaySectionBean dsb = super.getDisplayBean(false, false, request, isSubmitted);
// request.setAttribute("allSections", sectionBeans);
// request.setAttribute("displayAllCRF", "1");
// request.setAttribute(BEAN_DISPLAY, dsb);
// request.setAttribute(BEAN_ANNOTATIONS, ecb.getAnnotations());
// request.setAttribute("sec", sb);
// request.setAttribute("EventCRFBean", super.ecb);
PrintCRFBean printCrfBean = new PrintCRFBean();
printCrfBean.setAllSections(sectionBeans);
printCrfBean.setDisplaySectionBean(dsb);
printCrfBean.setEventCrfBean(ecb);
printCrfBean.setCrfVersionBean(crfVersionBean);
printCrfBean.setCrfBean(crfBean);
printCrfBeans.add(printCrfBean);
printCrfBean.setGrouped(false);
}
String studyName = null;
String siteName = null;
if (currentStudy.getParentStudyId() > 0) {
studyName = currentStudy.getParentStudyName();
siteName = currentStudy.getName();
} else {
studyName = currentStudy.getName();
}
request.setAttribute("printCrfBeans", printCrfBeans);
request.setAttribute("studyName", studyName);
request.setAttribute("site", siteName);
request.setAttribute("eventDefinition", sed.getName());
forwardPage(Page.VIEW_DEFAULT_CRF_VERSIONS_PRINT, request, response);
}
}
use of org.akaza.openclinica.bean.managestudy.PrintCRFBean in project OpenClinica by OpenClinica.
the class PrintAllSiteEventCRFServlet method processRequest.
@Override
public void processRequest(HttpServletRequest request, HttpServletResponse response) throws Exception {
FormProcessor fp = new FormProcessor(request);
// The PrintDataEntry servlet handles this parameter
int siteId = fp.getInt("siteId");
// JN:The following were the the global variables, moved as local.
EventCRFBean ecb = (EventCRFBean) request.getAttribute(INPUT_EVENT_CRF);
SectionBean sb = (SectionBean) request.getAttribute(SECTION_BEAN);
StudyEventDefinitionDAO sedao = new StudyEventDefinitionDAO(getDataSource());
EventDefinitionCRFDAO edao = new EventDefinitionCRFDAO(getDataSource());
EventDefinitionCRFDAO edcdao = new EventDefinitionCRFDAO(getDataSource());
ArrayList<SectionBean> allSectionBeans;
StudyDAO studyDao = new StudyDAO(getDataSource());
StudyBean site = (StudyBean) studyDao.findByPK(siteId);
ArrayList<StudyEventDefinitionBean> seds = new ArrayList<StudyEventDefinitionBean>();
seds = sedao.findAllByStudy(site);
// ArrayList eventDefinitionCRFs = (ArrayList) edao.findAllByStudy(site);
CRFVersionDAO cvdao = new CRFVersionDAO(getDataSource());
CRFDAO cdao = new CRFDAO(getDataSource());
boolean isSubmitted = false;
ArrayList<EventDefinitionCRFBean> edcs = new ArrayList();
for (StudyEventDefinitionBean sed : seds) {
int defId = sed.getId();
edcs.addAll(edcdao.findAllByDefinitionAndSiteIdAndParentStudyId(defId, siteId, site.getParentStudyId()));
}
Map eventDefinitionDefaultVersions = new LinkedHashMap();
Map eventDefinitionEventDefCrf = new LinkedHashMap<StudyEventDefinitionBean, EventDefinitionCRFBean>();
for (int i = 0; i < edcs.size(); i++) {
EventDefinitionCRFBean edc = edcs.get(i);
if (!edc.getStatus().equals(Status.AVAILABLE)) {
continue;
}
ArrayList versions = (ArrayList) cvdao.findAllByCRF(edc.getCrfId());
edc.setVersions(versions);
CRFBean crf = (CRFBean) cdao.findByPK(edc.getCrfId());
// edc.setCrfLabel(crf.getLabel());
edc.setCrfName(crf.getName());
// to show/hide edit action on jsp page
if (crf.getStatus().equals(Status.AVAILABLE)) {
edc.setOwner(crf.getOwner());
}
CRFVersionBean defaultVersion = (CRFVersionBean) cvdao.findByPK(edc.getDefaultVersionId());
StudyEventDefinitionBean studyEventDefinitionBean = (StudyEventDefinitionBean) sedao.findByPK(edc.getStudyEventDefinitionId());
edc.setDefaultVersionName(defaultVersion.getName());
if (defaultVersion.getStatus().isAvailable()) {
List list = (ArrayList) eventDefinitionDefaultVersions.get(studyEventDefinitionBean);
if (list == null)
list = new ArrayList();
list.add(defaultVersion);
eventDefinitionDefaultVersions.put(studyEventDefinitionBean, list);
eventDefinitionEventDefCrf.put(studyEventDefinitionBean, edc);
}
}
// Whether IE6 or IE7 is involved
String isIE = fp.getString("ie");
if ("y".equalsIgnoreCase(isIE)) {
request.setAttribute("isInternetExplorer", "true");
}
SectionDAO sdao = new SectionDAO(getDataSource());
CRFVersionDAO crfVersionDAO = new CRFVersionDAO(getDataSource());
CRFDAO crfDao = new CRFDAO(getDataSource());
Map sedCrfBeans = null;
for (Iterator it = eventDefinitionDefaultVersions.keySet().iterator(); it.hasNext(); ) {
if (sedCrfBeans == null)
sedCrfBeans = new LinkedHashMap();
StudyEventDefinitionBean sedBean = (StudyEventDefinitionBean) it.next();
List crfVersions = (ArrayList) eventDefinitionDefaultVersions.get(sedBean);
for (Iterator crfIt = crfVersions.iterator(); crfIt.hasNext(); ) {
CRFVersionBean crfVersionBean = (CRFVersionBean) crfIt.next();
allSectionBeans = new ArrayList<SectionBean>();
ArrayList sectionBeans = new ArrayList();
ItemGroupDAO itemGroupDao = new ItemGroupDAO(getDataSource());
// Find truely grouped tables, not groups with a name of 'Ungrouped'
List<ItemGroupBean> itemGroupBeans = itemGroupDao.findOnlyGroupsByCRFVersionID(crfVersionBean.getId());
CRFBean crfBean = crfDao.findByVersionId(crfVersionBean.getId());
if (itemGroupBeans.size() > 0) {
// get a DisplaySectionBean for each section of the CRF, sort
// them, then
// dispatch the request to a print JSP. The constructor for this
// handler takes
// a boolean value depending on whether data is involved or not
// ('false' in terms of this
// servlet; see PrintDataEntryServlet).
DisplaySectionBeanHandler handler = new DisplaySectionBeanHandler(false, getDataSource(), getServletContext());
handler.setCrfVersionId(crfVersionBean.getId());
// handler.setEventCRFId(eventCRFId);
List<DisplaySectionBean> displaySectionBeans = handler.getDisplaySectionBeans();
request.setAttribute("listOfDisplaySectionBeans", displaySectionBeans);
// Make available the CRF names and versions for
// the web page's header
CRFVersionBean crfverBean = (CRFVersionBean) crfVersionDAO.findByPK(crfVersionBean.getId());
request.setAttribute("crfVersionBean", crfverBean);
request.setAttribute("crfBean", crfBean);
// Set an attribute signaling that data is not involved
request.setAttribute("dataInvolved", "false");
PrintCRFBean printCrfBean = new PrintCRFBean();
printCrfBean.setDisplaySectionBeans(displaySectionBeans);
printCrfBean.setCrfVersionBean(crfVersionBean);
printCrfBean.setCrfBean(crfBean);
printCrfBean.setEventCrfBean(ecb);
printCrfBean.setGrouped(true);
List list = (ArrayList) sedCrfBeans.get(sedBean);
if (list == null)
list = new ArrayList();
list.add(printCrfBean);
sedCrfBeans.put(sedBean, list);
continue;
}
ecb = new EventCRFBean();
ecb.setCRFVersionId(crfVersionBean.getId());
CRFVersionBean version = (CRFVersionBean) crfVersionDAO.findByPK(crfVersionBean.getId());
ArrayList sects = (ArrayList) sdao.findByVersionId(version.getId());
for (int i = 0; i < sects.size(); i++) {
sb = (SectionBean) sects.get(i);
int sectId = sb.getId();
if (sectId > 0) {
allSectionBeans.add((SectionBean) sdao.findByPK(sectId));
}
}
EventDefinitionCRFBean edcBean = (EventDefinitionCRFBean) eventDefinitionEventDefCrf.get(sedBean);
request.setAttribute(EVENT_DEF_CRF_BEAN, edcBean);
request.setAttribute(INPUT_EVENT_CRF, ecb);
request.setAttribute(SECTION_BEAN, sb);
request.setAttribute(ALL_SECTION_BEANS, allSectionBeans);
sectionBeans = super.getAllDisplayBeans(request);
DisplaySectionBean dsb = super.getDisplayBean(false, false, request, isSubmitted);
PrintCRFBean printCrfBean = new PrintCRFBean();
printCrfBean.setAllSections(sectionBeans);
printCrfBean.setDisplaySectionBean(dsb);
printCrfBean.setEventCrfBean(ecb);
printCrfBean.setCrfVersionBean(crfVersionBean);
printCrfBean.setCrfBean(crfBean);
printCrfBean.setGrouped(false);
List list = (ArrayList) sedCrfBeans.get(sedBean);
if (list == null)
list = new ArrayList();
list.add(printCrfBean);
sedCrfBeans.put(sedBean, list);
}
}
StudyBean parentStudy = (StudyBean) studyDao.findByPK(site.getParentStudyId());
String studyName = parentStudy.getName();
String siteName = site.getName();
request.setAttribute("sedCrfBeans", sedCrfBeans);
request.setAttribute("studyName", studyName);
request.setAttribute("site", siteName);
forwardPage(Page.VIEW_ALL_SITE_DEFAULT_CRF_VERSIONS_PRINT, request, response);
}
Aggregations