Examples with UserAccountDAO org.akaza.openclinica.dao.login.UserAccountDAO used on opensource projects

Example 41 with UserAccountDAO

use of org.akaza.openclinica.dao.login.UserAccountDAO in project OpenClinica by OpenClinica.

the class ExampleSpringJob method executeInternal.

@Override
protected void executeInternal(JobExecutionContext context) throws JobExecutionException {
    // need to generate a Locale so that user beans and other things will
    // generate normally
    Locale locale = new Locale("en-US");
    ResourceBundleProvider.updateLocale(locale);
    ResourceBundle pageMessages = ResourceBundleProvider.getPageMessagesBundle();
    // logger.debug("--");
    // logger.debug("-- executing a job " + message + " at " + new
    // java.util.Date().toString());
    JobDataMap dataMap = context.getMergedJobDataMap();
    SimpleTrigger trigger = (SimpleTrigger) context.getTrigger();
    try {
        ApplicationContext appContext = (ApplicationContext) context.getScheduler().getContext().get("applicationContext");
        String studySubjectNumber = ((CoreResources) appContext.getBean("coreResources")).getField("extract.number");
        coreResources = (CoreResources) appContext.getBean("coreResources");
        ruleSetRuleDao = (RuleSetRuleDao) appContext.getBean("ruleSetRuleDao");
        dataSource = (DataSource) appContext.getBean("dataSource");
        mailSender = (OpenClinicaMailSender) appContext.getBean("openClinicaMailSender");
        AuditEventDAO auditEventDAO = new AuditEventDAO(dataSource);
        // Scheduler scheduler = context.getScheduler();
        // JobDetail detail = context.getJobDetail();
        // jobDetailBean = (JobDetailBean) detail;
        /*
             * data map here should coincide with the job data map found in
             * CreateJobExportServlet, with the following code: jobDataMap = new
             * JobDataMap(); jobDataMap.put(DATASET_ID, datasetId);
             * jobDataMap.put(PERIOD, period); jobDataMap.put(EMAIL, email);
             * jobDataMap.put(TAB, tab); jobDataMap.put(CDISC, cdisc);
             * jobDataMap.put(SPSS, spss);
             */
        String alertEmail = dataMap.getString(EMAIL);
        String localeStr = dataMap.getString(LOCALE);
        if (localeStr != null) {
            locale = new Locale(localeStr);
            ResourceBundleProvider.updateLocale(locale);
            pageMessages = ResourceBundleProvider.getPageMessagesBundle();
        }
        int dsId = dataMap.getInt(DATASET_ID);
        String tab = dataMap.getString(TAB);
        String cdisc = dataMap.getString(CDISC);
        String cdisc12 = dataMap.getString(CDISC12);
        if (cdisc12 == null) {
            cdisc12 = "0";
        }
        String cdisc13 = dataMap.getString(CDISC13);
        if (cdisc13 == null) {
            cdisc13 = "0";
        }
        String cdisc13oc = dataMap.getString(CDISC13OC);
        if (cdisc13oc == null) {
            cdisc13oc = "0";
        }
        String spss = dataMap.getString(SPSS);
        int userId = dataMap.getInt(USER_ID);
        int studyId = dataMap.getInt(STUDY_ID);
        // String datasetId = dataMap.getString(DATASET_ID);
        // int dsId = new Integer(datasetId).intValue();
        // String userAcctId = dataMap.getString(USER_ID);
        // int userId = new Integer(userAcctId).intValue();
        // why the flip-flop? if one property is set to 'true' we can
        // see jobs in another screen but all properties have to be
        // strings
        logger.debug("-- found the job: " + dsId + " dataset id");
        // for (Iterator it = dataMap.entrySet().iterator(); it.hasNext();)
        // {
        // java.util.Map.Entry entry = (java.util.Map.Entry) it.next();
        // Object key = entry.getKey();
        // Object value = entry.getValue();
        // // logger.debug("-- found datamap property: " + key.toString() +
        // // " : " + value.toString());
        // }
        HashMap fileName = new HashMap<String, Integer>();
        if (dsId > 0) {
            // trying to not throw an error if there's no dataset id
            DatasetDAO dsdao = new DatasetDAO(dataSource);
            DatasetBean datasetBean = (DatasetBean) dsdao.findByPK(dsId);
            StudyDAO studyDao = new StudyDAO(dataSource);
            UserAccountDAO userAccountDAO = new UserAccountDAO(dataSource);
            // hmm, three lines in the if block DRY?
            String generalFileDir = "";
            String generalFileDirCopy = "";
            String exportFilePath = SQLInitServlet.getField("exportFilePath");
            String pattern = "yyyy" + File.separator + "MM" + File.separator + "dd" + File.separator + "HHmmssSSS" + File.separator;
            SimpleDateFormat sdfDir = new SimpleDateFormat(pattern);
            generalFileDir = DATASET_DIR + datasetBean.getId() + File.separator + sdfDir.format(new java.util.Date());
            if (!"".equals(exportFilePath)) {
                generalFileDirCopy = SQLInitServlet.getField("filePath") + exportFilePath + File.separator;
            }
            // logger.debug("-- created the following dir: " +
            // generalFileDir);
            long sysTimeBegin = System.currentTimeMillis();
            // set up the user bean here, tbh
            // logger.debug("-- gen tab file 00");
            userBean = (UserAccountBean) userAccountDAO.findByPK(userId);
            // needs to also be captured by the servlet, tbh
            // logger.debug("-- gen tab file 00");
            generateFileService = new GenerateExtractFileService(dataSource, coreResources, ruleSetRuleDao);
            // logger.debug("-- gen tab file 00");
            // tbh #5796 - covers a bug when the user changes studies, 10/2010
            StudyBean activeStudy = (StudyBean) studyDao.findByPK(studyId);
            StudyBean parentStudy = new StudyBean();
            logger.debug("active study: " + studyId + " parent study: " + activeStudy.getParentStudyId());
            if (activeStudy.getParentStudyId() > 0) {
                // StudyDAO sdao = new StudyDAO(sm.getDataSource());
                parentStudy = (StudyBean) studyDao.findByPK(activeStudy.getParentStudyId());
            } else {
                parentStudy = activeStudy;
            // covers a bug in tab file creation, tbh 01/2009
            }
            logger.debug("-- found extract bean ");
            ExtractBean eb = generateFileService.generateExtractBean(datasetBean, activeStudy, parentStudy);
            MessageFormat mf = new MessageFormat("");
            StringBuffer message = new StringBuffer();
            StringBuffer auditMessage = new StringBuffer();
            // use resource bundle page messages to generate the email, tbh
            // 02/2009
            // message.append(pageMessages.getString("html_email_header_1")
            // + " " + alertEmail +
            // pageMessages.getString("html_email_header_2") + "<br/>");
            message.append("<p>" + pageMessages.getString("email_header_1") + " " + EmailEngine.getAdminEmail() + " " + pageMessages.getString("email_header_2") + " Job Execution " + pageMessages.getString("email_header_3") + "</p>");
            message.append("<P>Dataset: " + datasetBean.getName() + "</P>");
            message.append("<P>Study: " + activeStudy.getName() + "</P>");
            message.append("<p>" + pageMessages.getString("html_email_body_1") + datasetBean.getName() + pageMessages.getString("html_email_body_2") + SQLInitServlet.getField("sysURL") + pageMessages.getString("html_email_body_3") + "</p>");
            // logger.debug("-- gen tab file 00");
            if ("1".equals(tab)) {
                logger.debug("-- gen tab file 01");
                fileName = generateFileService.createTabFile(eb, sysTimeBegin, generalFileDir, datasetBean, activeStudy.getId(), parentStudy.getId(), generalFileDirCopy, userBean);
                message.append("<p>" + pageMessages.getString("html_email_body_4") + " " + getFileNameStr(fileName) + pageMessages.getString("html_email_body_4_5") + SQLInitServlet.getField("sysURL.base") + "AccessFile?fileId=" + getFileIdInt(fileName) + pageMessages.getString("html_email_body_3") + "</p>");
                // MessageFormat mf = new MessageFormat("");
                // mf.applyPattern(pageMessages.getString(
                // "you_can_access_tab_delimited"));
                // Object[] arguments = { getFileIdInt(fileName) };
                // auditMessage.append(mf.format(arguments));
                // auditMessage.append(
                // "You can access your tab-delimited file <a href='AccessFile?fileId="
                // + getFileIdInt(fileName) + "'>here</a>.<br/>");
                auditMessage.append(pageMessages.getString("you_can_access_tab_delimited") + getFileIdInt(fileName) + pageMessages.getString("access_end"));
            }
            if ("1".equals(cdisc)) {
                String odmVersion = "oc1.2";
                fileName = generateFileService.createODMFile(odmVersion, sysTimeBegin, generalFileDir, datasetBean, activeStudy, generalFileDirCopy, eb, activeStudy.getId(), parentStudy.getId(), studySubjectNumber, true, true, true, null, userBean);
                logger.debug("-- gen odm file");
                message.append("<p>" + pageMessages.getString("html_email_body_4") + " " + getFileNameStr(fileName) + pageMessages.getString("html_email_body_4_5") + SQLInitServlet.getField("sysURL.base") + "AccessFile?fileId=" + getFileIdInt(fileName) + pageMessages.getString("html_email_body_3") + "</p>");
                // MessageFormat mf = new MessageFormat("");
                // mf.applyPattern(pageMessages.getString(
                // "you_can_access_odm_12"));
                // Object[] arguments = { getFileIdInt(fileName) };
                // auditMessage.append(mf.format(arguments));
                // auditMessage.append(
                // "You can access your ODM 1.2 w/OpenClinica Extension XML file <a href='AccessFile?fileId="
                // + getFileIdInt(fileName)
                // + "'>here</a>.<br/>");
                auditMessage.append(pageMessages.getString("you_can_access_odm_12") + getFileIdInt(fileName) + pageMessages.getString("access_end"));
            }
            if ("1".equals(cdisc12)) {
                String odmVersion = "1.2";
                fileName = generateFileService.createODMFile(odmVersion, sysTimeBegin, generalFileDir, datasetBean, activeStudy, generalFileDirCopy, eb, activeStudy.getId(), parentStudy.getId(), studySubjectNumber, true, true, true, null, userBean);
                logger.debug("-- gen odm file 1.2 default");
                message.append("<p>" + pageMessages.getString("html_email_body_4") + " " + getFileNameStr(fileName) + pageMessages.getString("html_email_body_4_5") + SQLInitServlet.getField("sysURL.base") + "AccessFile?fileId=" + getFileIdInt(fileName) + pageMessages.getString("html_email_body_3") + "</p>");
                // mf.applyPattern(pageMessages.getString(
                // "you_can_access_odm_12_xml"));
                // Object[] arguments = { getFileIdInt(fileName) };
                // auditMessage.append(mf.format(arguments));
                // // auditMessage.append(
                // "You can access your ODM 1.2 XML file <a href='AccessFile?fileId="
                // + getFileIdInt(fileName) + "'>here</a>.<br/>");
                auditMessage.append(pageMessages.getString("you_can_access_odm_12_xml") + getFileIdInt(fileName) + pageMessages.getString("access_end"));
            }
            if ("1".equals(cdisc13)) {
                String odmVersion = "1.3";
                fileName = generateFileService.createODMFile(odmVersion, sysTimeBegin, generalFileDir, datasetBean, activeStudy, generalFileDirCopy, eb, activeStudy.getId(), parentStudy.getId(), studySubjectNumber, true, true, true, null, userBean);
                logger.debug("-- gen odm file 1.3");
                message.append("<p>" + pageMessages.getString("html_email_body_4") + " " + getFileNameStr(fileName) + pageMessages.getString("html_email_body_4_5") + SQLInitServlet.getField("sysURL.base") + "AccessFile?fileId=" + getFileIdInt(fileName) + pageMessages.getString("html_email_body_3") + "</p>");
                // MessageFormat mf = new MessageFormat("");
                // mf.applyPattern(pageMessages.getString(
                // "you_can_access_odm_13"));
                // Object[] arguments = { getFileIdInt(fileName) };
                // auditMessage.append(mf.format(arguments));
                // auditMessage.append(
                // "You can access your ODM 1.3 XML file <a href='AccessFile?fileId="
                // + getFileIdInt(fileName) + "'>here</a>.<br/>");
                auditMessage.append(pageMessages.getString("you_can_access_odm_13") + getFileIdInt(fileName) + pageMessages.getString("access_end"));
            }
            if ("1".equals(cdisc13oc)) {
                String odmVersion = "oc1.3";
                fileName = generateFileService.createODMFile(odmVersion, sysTimeBegin, generalFileDir, datasetBean, activeStudy, generalFileDirCopy, eb, activeStudy.getId(), parentStudy.getId(), studySubjectNumber, true, true, true, null, userBean);
                logger.debug("-- gen odm file 1.3 oc");
                message.append("<p>" + pageMessages.getString("html_email_body_4") + " " + getFileNameStr(fileName) + pageMessages.getString("html_email_body_4_5") + SQLInitServlet.getField("sysURL.base") + "AccessFile?fileId=" + getFileIdInt(fileName) + pageMessages.getString("html_email_body_3") + "</p>");
                // MessageFormat mf = new MessageFormat("");
                // mf.applyPattern(pageMessages.getString(
                // "you_can_access_odm_13_xml"));
                // Object[] arguments = { getFileIdInt(fileName) };
                // auditMessage.append(mf.format(arguments));
                // auditMessage.append(
                // "You can access your ODM 1.3 w/OpenClinica Extension XML file <a href='AccessFile?fileId="
                // + getFileIdInt(fileName)
                // + "'>here</a>.<br/>");
                auditMessage.append(pageMessages.getString("you_can_access_odm_13_xml") + getFileIdInt(fileName) + pageMessages.getString("access_end"));
            }
            if ("1".equals(spss)) {
                SPSSReportBean answer = new SPSSReportBean();
                fileName = generateFileService.createSPSSFile(datasetBean, eb, activeStudy, parentStudy, sysTimeBegin, generalFileDir, answer, generalFileDirCopy, userBean);
                logger.debug("-- gen spss file");
                message.append("<p>" + pageMessages.getString("html_email_body_4") + " " + getFileNameStr(fileName) + pageMessages.getString("html_email_body_4_5") + SQLInitServlet.getField("sysURL.base") + "AccessFile?fileId=" + getFileIdInt(fileName) + pageMessages.getString("html_email_body_3") + "</p>");
                // MessageFormat mf = new MessageFormat("");
                // mf.applyPattern(pageMessages.getString(
                // "you_can_access_spss"));
                // Object[] arguments = { getFileIdInt(fileName) };
                // auditMessage.append(mf.format(arguments));
                // auditMessage.append(
                // "You can access your SPSS files <a href='AccessFile?fileId="
                // + getFileIdInt(fileName) + "'>here</a>.<br/>");
                auditMessage.append(pageMessages.getString("you_can_access_spss") + getFileIdInt(fileName) + pageMessages.getString("access_end"));
            }
            // wrap up the message, and send the email
            message.append("<p>" + pageMessages.getString("html_email_body_5") + "</P><P>" + pageMessages.getString("email_footer"));
            try {
                mailSender.sendEmail(alertEmail.trim(), pageMessages.getString("job_ran_for") + " " + datasetBean.getName(), message.toString(), true);
            } catch (OpenClinicaSystemException ose) {
            // Do Nothing, In the future we might want to have an email
            // status added to system.
            }
            TriggerBean triggerBean = new TriggerBean();
            triggerBean.setDataset(datasetBean);
            triggerBean.setUserAccount(userBean);
            triggerBean.setFullName(trigger.getKey().getName());
            auditEventDAO.createRowForExtractDataJobSuccess(triggerBean, auditMessage.toString());
        } else {
            TriggerBean triggerBean = new TriggerBean();
            // triggerBean.setDataset(datasetBean);
            triggerBean.setUserAccount(userBean);
            triggerBean.setFullName(trigger.getKey().getName());
            auditEventDAO.createRowForExtractDataJobFailure(triggerBean);
        // logger.debug("-- made it here for some reason, ds id: "
        // + dsId);
        }
    // logger.debug("-- generated file: " + fileNameStr);
    // dataSource.
    } catch (Exception e) {
        // TODO Auto-generated catch block -- ideally should generate a fail
        // msg here, tbh 02/2009
        logger.debug("-- found exception: " + e.getMessage());
        e.printStackTrace();
    }
}

Example 42 with UserAccountDAO

use of org.akaza.openclinica.dao.login.UserAccountDAO in project OpenClinica by OpenClinica.

the class ImportSpringJob method executeInternalInTransaction.

protected void executeInternalInTransaction(JobExecutionContext context) {
    locale = new Locale("en-US");
    ResourceBundleProvider.updateLocale(locale);
    respage = ResourceBundleProvider.getPageMessagesBundle();
    resword = ResourceBundleProvider.getWordsBundle();
    triggerService = new TriggerService();
    JobDataMap dataMap = context.getMergedJobDataMap();
    SimpleTrigger trigger = (SimpleTrigger) context.getTrigger();
    TriggerBean triggerBean = new TriggerBean();
    triggerBean.setFullName(trigger.getKey().getName());
    String contactEmail = dataMap.getString(EMAIL);
    logger.debug("=== starting to run trigger " + trigger.getKey().getName() + " ===");
    try {
        ApplicationContext appContext = (ApplicationContext) context.getScheduler().getContext().get("applicationContext");
        dataSource = (DataSource) appContext.getBean("dataSource");
        mailSender = (OpenClinicaMailSender) appContext.getBean("openClinicaMailSender");
        RuleSetServiceInterface ruleSetService = (RuleSetServiceInterface) appContext.getBean("ruleSetService");
        itemDataDao = new ItemDataDAO(dataSource);
        eventCrfDao = new EventCRFDAO(dataSource);
        auditEventDAO = new AuditEventDAO(dataSource);
        int userId = dataMap.getInt(USER_ID);
        UserAccountDAO userAccountDAO = new UserAccountDAO(dataSource);
        UserAccountBean ub = (UserAccountBean) userAccountDAO.findByPK(userId);
        triggerBean.setUserAccount(ub);
        String directory = dataMap.getString(DIRECTORY);
        String studyName = dataMap.getString(STUDY_NAME);
        String studyOid = dataMap.getString(STUDY_OID);
        String localeStr = dataMap.getString(ExampleSpringJob.LOCALE);
        if (localeStr != null) {
            locale = new Locale(localeStr);
            ResourceBundleProvider.updateLocale(locale);
            respage = ResourceBundleProvider.getPageMessagesBundle();
            resword = ResourceBundleProvider.getWordsBundle();
        }
        StudyDAO studyDAO = new StudyDAO(dataSource);
        StudyBean studyBean;
        if (studyOid != null) {
            studyBean = studyDAO.findByOid(studyOid);
        } else {
            studyBean = (StudyBean) studyDAO.findByName(studyName);
        }
        // might also need study id here for the data service?
        File fileDirectory = new File(SQLInitServlet.getField("filePath") + DIR_PATH + File.separator);
        // File fileDirectory = new File(IMPORT_DIR);
        if ("".equals(directory)) {
        // avoid NPEs
        // do nothing here?
        } else {
            // there is a separator at the end of IMPORT_DIR already...
            // fileDirectory = new File(IMPORT_DIR + directory +
            // File.separator);
            fileDirectory = new File(SQLInitServlet.getField("filePath") + DIR_PATH + File.separator + directory + File.separator);
        }
        if (!fileDirectory.isDirectory()) {
            fileDirectory.mkdirs();
        }
        // this is necessary the first time this is run, tbh
        // File destDirectory = new File(IMPORT_DIR_2);
        File destDirectory = new File(SQLInitServlet.getField("filePath") + DEST_DIR + File.separator);
        if (!destDirectory.isDirectory()) {
            destDirectory.mkdirs();
        }
        // look at directory, if there are new files, move them over and
        // read them
        // File fileDirectory = new File(directory);
        String[] files = fileDirectory.list();
        logger.debug("found " + files.length + " files under directory " + SQLInitServlet.getField("filePath") + DIR_PATH + File.separator + directory);
        File[] target = new File[files.length];
        File[] destination = new File[files.length];
        for (int i = 0; i < files.length; i++) {
            // hmm
            if (!new File(fileDirectory + File.separator + files[i]).isDirectory()) {
                File f = new File(fileDirectory + File.separator + files[i]);
                if (f == null || f.getName() == null) {
                    logger.debug("found a null file");
                } else if (f.getName().indexOf(".xml") < 0 && f.getName().indexOf(".XML") < 0) {
                    logger.debug("does not seem to be an xml file");
                // we need a place holder to avoid 'gaps' in the file
                // list
                } else {
                    logger.debug("adding: " + f.getName());
                    // new File(IMPORT_DIR +
                    target[i] = f;
                    // directory +
                    // File.separator + files[i]);
                    // destination[i] = new File(IMPORT_DIR_2 + files[i]);
                    destination[i] = new File(SQLInitServlet.getField("filePath") + DEST_DIR + File.separator + files[i]);
                }
            }
        }
        if (target.length > 0 && destination.length > 0) {
            cutAndPaste(target, destination);
            // @pgawade 28-June-2012: Fix for issue #13964 - Remove the null
            // elements from destination array of files
            // which might be created because of presense of sub-directories
            // or non-xml files under scheduled_data_import directory
            // which are non-usable files for import.
            destination = removeNullElements(destination);
            // do everything else here with 'destination'
            ArrayList<String> auditMessages = processData(destination, dataSource, respage, resword, ub, studyBean, destDirectory, triggerBean, ruleSetService);
            auditEventDAO.createRowForExtractDataJobSuccess(triggerBean, auditMessages.get(1));
            try {
                if (contactEmail != null && !"".equals(contactEmail)) {
                    mailSender.sendEmail(contactEmail, respage.getString("job_ran_for") + " " + triggerBean.getFullName(), generateMsg(auditMessages.get(0), contactEmail), true);
                    logger.debug("email body: " + auditMessages.get(1));
                }
            } catch (OpenClinicaSystemException e) {
                // Do nothing
                logger.error("=== throw an ocse === " + e.getMessage());
                e.printStackTrace();
            }
        } else {
            logger.debug("no real files found");
            auditEventDAO.createRowForExtractDataJobSuccess(triggerBean, respage.getString("job_ran_but_no_files"));
        // no email here, tbh
        }
    // use the business logic to go through each one and import that
    // data
    // check to see if they were imported before?
    // using the four methods:
    // importCRFDataServce.validateStudyMetadata,
    // service.lookupValidationErrors, service.fetchEventCRFBeans(?),
    // and
    // service.generateSummaryStatsBean(for the email we send out later)
    } catch (Exception e) {
        // more detailed reporting here
        logger.error("found a fail exception: " + e.getMessage());
        e.printStackTrace();
        auditEventDAO.createRowForExtractDataJobFailure(triggerBean, e.getMessage());
        try {
            mailSender.sendEmail(contactEmail, respage.getString("job_failure_for") + " " + triggerBean.getFullName(), e.getMessage(), true);
        } catch (OpenClinicaSystemException ose) {
            // Do nothing
            logger.error("=== throw an ocse: " + ose.getMessage());
        }
    }
}

Example 43 with UserAccountDAO

use of org.akaza.openclinica.dao.login.UserAccountDAO in project OpenClinica by OpenClinica.

the class Validator method validate.

protected HashMap validate(String fieldName, Validation v) {
    switch(v.getType()) {
        case NO_BLANKS:
            if (isBlank(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case IS_A_NUMBER:
            if (!isNumber(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case IS_IN_RANGE:
            float lowerBound = v.getFloat(0);
            float upperBound = v.getFloat(1);
            if (!isInRange(fieldName, lowerBound, upperBound)) {
                addError(fieldName, v);
            }
            break;
        case IS_A_DATE:
            if (!isDate(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case IS_DATE_TIME:
            if (!isDateTime(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case CHECK_SAME:
            String compareField = v.getString(0);
            if (!isSame(fieldName, compareField)) {
                addError(fieldName, v);
            }
            break;
        case IS_A_EMAIL:
            if (!isEmail(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case IS_A_PHONE_NUMBER:
            if (!isPhoneNumber(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case ENTITY_EXISTS:
            EntityDAO edao = (EntityDAO) v.getArg(0);
            if (!entityExists(fieldName, edao)) {
                addError(fieldName, v);
            }
            break;
        case ENTITY_EXISTS_IN_STUDY:
            AuditableEntityDAO dao = (AuditableEntityDAO) v.getArg(0);
            StudyBean study = (StudyBean) v.getArg(1);
            if (!entityExistsInStudy(fieldName, dao, study)) {
                addError(fieldName, v);
            }
            break;
        case USERNAME_UNIQUE:
            UserAccountDAO udao = (UserAccountDAO) v.getArg(0);
            if (!usernameUnique(fieldName, udao)) {
                addError(fieldName, v);
            }
            break;
        case IS_AN_INTEGER:
            if (!isInteger(fieldName)) {
                addError(fieldName, v);
            }
            break;
        // break;
        case IS_IN_SET:
            ArrayList set = (ArrayList) v.getArg(0);
            if (!isInSet(fieldName, set)) {
                addError(fieldName, v);
            }
            break;
        case IS_A_PASSWORD:
            if (!lengthComparesToStaticValue(fieldName, NumericComparisonOperator.GREATER_THAN_OR_EQUAL_TO, PASSWORD_MINIMUM_LENGTH)) {
                addError(fieldName, v);
            }
            break;
        case IS_A_USERNAME:
            if (!isUsername(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case IS_VALID_TERM:
            TermType termType = (TermType) v.getArg(0);
            if (!isValidTerm(fieldName, termType)) {
                addError(fieldName, v);
            }
            break;
        case COMPARES_TO_STATIC_VALUE:
            NumericComparisonOperator operator = (NumericComparisonOperator) v.getArg(0);
            float compareTo = v.getFloat(1);
            if (!comparesToStaticValue(fieldName, operator, compareTo)) {
                addError(fieldName, v);
            }
            break;
        case LENGTH_NUMERIC_COMPARISON:
            NumericComparisonOperator operator2 = (NumericComparisonOperator) v.getArg(0);
            int compareTo2 = v.getInt(1);
            if (!lengthComparesToStaticValue(fieldName, operator2, compareTo2)) {
                addError(fieldName, v);
            }
            break;
        case DATE_IS_AFTER_OR_EQUAL:
            String earlierDateFieldName = v.getString(0);
            if (!isDateAfterOrEqual(fieldName, earlierDateFieldName)) {
                addError(fieldName, v);
            }
            break;
        case NO_BLANKS_SET:
            if (isSetBlank(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case IN_RESPONSE_SET:
            ResponseSetBean rsb = (ResponseSetBean) v.getArg(0);
            if (!isInResponseSet(fieldName, rsb, true)) {
                addError(fieldName, v);
            }
            break;
        case IN_RESPONSE_SET_COMMA_SEPERATED:
            ResponseSetBean rsbs = (ResponseSetBean) v.getArg(0);
            if (!isInResponseSetCommaSeperated(fieldName, rsbs, true)) {
                addError(fieldName, v);
            }
            break;
        case IN_RESPONSE_SET_SINGLE_VALUE:
            ResponseSetBean rsbSingle = (ResponseSetBean) v.getArg(0);
            if (!isInResponseSet(fieldName, rsbSingle, false)) {
                addError(fieldName, v);
            }
            break;
        case MATCHES_INITIAL_DATA_ENTRY_VALUE:
            String oldValue = v.getString(0);
            boolean isMultiple = v.getBoolean(1);
            if (!valueMatchesInitialValue(fieldName, oldValue, isMultiple)) {
                addError(fieldName, v);
            }
            break;
        case DIFFERENT_NUMBER_OF_GROUPS_IN_DDE:
            addError(fieldName, v);
            break;
        case IS_REQUIRED:
            if (isBlank(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case DATE_IN_PAST:
            if (!isDateInPast(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case MATCHES_REGULAR_EXPRESSION:
            if (!matchesRegex(fieldName, v.getString(0))) {
                addError(fieldName, v);
            }
            break;
        case CHECK_DIFFERENT:
            String old = v.getString(0);
            if (isSame(fieldName, old)) {
                addError(fieldName, v);
            }
            break;
        case IS_A_DATE_WITHOUT_REQUIRED_CHECK:
            if (!isDateWithoutRequiredCheck(fieldName)) {
                addError(fieldName, v);
            }
            break;
        case CALCULATION_FAILED:
            addError(fieldName, v);
            break;
        case IS_AN_RULE:
            ArrayList<String> messages = (ArrayList<String>) v.getArg(0);
            StringBuffer sb = new StringBuffer();
            for (int i = 0; i < messages.size(); i++) {
                sb.append(messages.get(i));
                if (i != messages.size() - 1)
                    sb.append(" , ");
                logger.debug(messages.get(i));
            }
            v.setErrorMessage(sb.toString());
            addError(fieldName, v);
            break;
        case IS_PARTIAL_DATE:
            boolean isPDate = Boolean.FALSE;
            String fieldValue = getFieldValue(fieldName);
            if (fieldValue != null) {
                // resformat.getString("date_format_string"))) {
                if (StringUtil.isFormatDate(fieldValue, resformat.getString("date_format_string")) || StringUtil.isPartialYear(fieldValue, "yyyy") || StringUtil.isPartialYearMonth(fieldValue, resformat.getString("date_format_year_month"))) {
                    isPDate = true;
                }
            }
            if (!isPDate) {
                addError(fieldName, v);
            }
            break;
        case IS_VALID_WIDTH_DECIMAL:
            ArrayList<String> params = (ArrayList<String>) v.getArg(0);
            String dataType = params.get(0);
            String widthDecimal = params.get(1);
            StringBuffer error = this.validateFieldWidthDecimal(fieldName, dataType, widthDecimal);
            if (error.length() > 0) {
                addError(fieldName, error.toString());
            }
            break;
        case BARCODE_EAN_13:
            EanCheckDigit eanChk = new EanCheckDigit();
            if (!eanChk.isValid(getFieldValue(fieldName))) {
                addError(fieldName, v);
            }
            break;
        case TO_HIDE_CONDITIONAL_DISPLAY:
            addError(fieldName, v);
            break;
    }
    return errors;
}

Example 44 with UserAccountDAO

use of org.akaza.openclinica.dao.login.UserAccountDAO in project OpenClinica by OpenClinica.

the class SetUpUserInterceptor method preHandle.

@Override
public boolean preHandle(HttpServletRequest httpServletRequest, HttpServletResponse httpServletResponse, Object o) throws Exception {
    Locale locale = ResourceBundleProvider.localeMap.get(Thread.currentThread());
    if (locale == null) {
        ResourceBundleProvider.updateLocale(httpServletRequest.getLocale());
    }
    //Set up the user account bean: check the Session first
    HttpSession currentSession = httpServletRequest.getSession();
    UserAccountBean userBean = (UserAccountBean) currentSession.getAttribute("userBean");
    String userName = "";
    boolean userBeanIsInvalid;
    UserAccountDAO userAccountDAO = new UserAccountDAO(dataSource);
    if (userBean == null) {
        userName = httpServletRequest.getRemoteUser();
        userBeanIsInvalid = "".equalsIgnoreCase(userName);
        if (!userBeanIsInvalid) {
            userBean = (UserAccountBean) userAccountDAO.findByUserName(userName);
            userBeanIsInvalid = (userBean == null);
            if (!userBeanIsInvalid) {
                currentSession.setAttribute(USER_BEAN_NAME, userBean);
            }
        }
    }
    //The user bean could still be null at this point
    if (userBean == null) {
        userBean = new UserAccountBean();
        userBean.setName("unknown");
        currentSession.setAttribute(USER_BEAN_NAME, userBean);
    }
    userBean = userBean.getId() > 0 ? (UserAccountBean) userAccountDAO.findByPK(userBean.getId()) : userBean;
    SetUpStudyRole setupStudy = new SetUpStudyRole(dataSource);
    setupStudy.setUp(currentSession, userBean);
    return true;
}

Example 45 with UserAccountDAO

use of org.akaza.openclinica.dao.login.UserAccountDAO in project OpenClinica by OpenClinica.

the class UserPermissionInterceptor method handleRequest.

public boolean handleRequest(MessageContext messageContext, Object endpoint) throws Exception {
    ResourceBundleProvider.updateLocale(new Locale("en_US"));
    Object principal = SecurityContextHolder.getContext().getAuthentication().getPrincipal();
    String username = null;
    if (principal instanceof UserDetails) {
        username = ((UserDetails) principal).getUsername();
    } else {
        username = principal.toString();
    }
    UserAccountDAO userAccountDao = new UserAccountDAO(dataSource);
    UserAccountBean userAccountBean = ((UserAccountBean) userAccountDao.findByUserName(username));
    Boolean result = userAccountBean.getRunWebservices();
    if (!result) {
        SoapBody response = ((SoapMessage) messageContext.getResponse()).getSoapBody();
        response.addClientOrSenderFault("Authorization is required to execute SOAP web services with this account.Please contact your administrator.", Locale.ENGLISH);
        return false;
    } else {
        return result;
    }
}