Examples with AuthzToken org.apache.airavata.model.security.AuthzToken used on opensource projects

Example 81 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class CreateLaunchExperiment method createEchoExperimentForFSD.

public static String createEchoExperimentForFSD(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), echoAppId);
        for (InputDataObjectType inputDataObjectType : exInputs) {
            if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo")) {
                inputDataObjectType.setValue("Hello World");
            } else if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo2")) {
                inputDataObjectType.setValue("http://www.textfiles.com/100/ad.txt");
            } else if (inputDataObjectType.getName().equalsIgnoreCase("Input_to_Echo3")) {
                inputDataObjectType.setValue("file:///tmp/test.txt");
            }
        }
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), echoAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "echoExperiment", "SimpleEcho2", echoAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), echoAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(unicoreHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 1, 1, "normal", 30, 1048576);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    userConfigurationData.setGenerateCert(false);
                    userConfigurationData.setUserDN("");
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 82 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class CreateLaunchExperiment method createExperimentNWCHEMStampede.

public static String createExperimentNWCHEMStampede(Airavata.Client client) throws TException {
    try {
        List<InputDataObjectType> exInputs = client.getApplicationInputs(new AuthzToken(""), nwchemAppId);
        setNWCHEMInputs(exInputs);
        List<OutputDataObjectType> exOut = client.getApplicationOutputs(new AuthzToken(""), nwchemAppId);
        ExperimentModel simpleExperiment = ExperimentModelUtil.createSimpleExperiment(DEFAULT_GATEWAY, "default", "admin", "NWchemExperiment", "Testing", nwchemAppId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);
        Map<String, String> computeResources = airavataClient.getAvailableAppInterfaceComputeResources(new AuthzToken(""), nwchemAppId);
        if (computeResources != null && computeResources.size() != 0) {
            for (String id : computeResources.keySet()) {
                String resourceName = computeResources.get(id);
                if (resourceName.equals(stampedeHostName)) {
                    ComputationalResourceSchedulingModel scheduling = ExperimentModelUtil.createComputationResourceScheduling(id, 1, 16, 1, "development", 30, 1);
                    UserConfigurationDataModel userConfigurationData = new UserConfigurationDataModel();
                    userConfigurationData.setAiravataAutoSchedule(false);
                    userConfigurationData.setOverrideManualScheduledParams(false);
                    userConfigurationData.setComputationalResourceScheduling(scheduling);
                    simpleExperiment.setUserConfigurationData(userConfigurationData);
                    return client.createExperiment(new AuthzToken(""), DEFAULT_GATEWAY, simpleExperiment);
                }
            }
        }
    } catch (AiravataSystemException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataSystemException(e);
    } catch (InvalidRequestException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new InvalidRequestException(e);
    } catch (AiravataClientException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new AiravataClientException(e);
    } catch (TException e) {
        logger.error("Error occured while creating the experiment...", e.getMessage());
        throw new TException(e);
    }
    return null;
}

Example 83 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class RegisterSampleApplications method registerWRFInterface.

public void registerWRFInterface() {
    try {
        System.out.println("#### Registering WRF Interface #### \n");
        List<String> appModules = new ArrayList<String>();
        appModules.add(wrfModuleId);
        InputDataObjectType input1 = RegisterSampleApplicationsUtils.createAppInput("Config_Namelist_File", null, DataType.URI, null, 1, true, true, false, "Namelist Configuration File - namelist.input", null);
        InputDataObjectType input2 = RegisterSampleApplicationsUtils.createAppInput("WRF_Initial_Conditions", null, DataType.URI, null, 2, true, true, false, "Initial Conditions File - wrfinput_d01", null);
        InputDataObjectType input3 = RegisterSampleApplicationsUtils.createAppInput("WRF_Boundary_File", null, DataType.URI, null, 3, true, true, false, "Boundary Conditions File - wrfbdy_d01", null);
        List<InputDataObjectType> applicationInputs = new ArrayList<InputDataObjectType>();
        applicationInputs.add(input1);
        applicationInputs.add(input2);
        applicationInputs.add(input3);
        OutputDataObjectType output1 = RegisterSampleApplicationsUtils.createAppOutput("WRF_Output", "", DataType.URI, true, true, null);
        OutputDataObjectType output2 = RegisterSampleApplicationsUtils.createAppOutput("WRF_Execution_Log", "", DataType.URI, true, true, null);
        OutputDataObjectType output3 = RegisterSampleApplicationsUtils.createAppOutput("STDOUT", null, DataType.STDOUT, true, true, null);
        OutputDataObjectType output4 = RegisterSampleApplicationsUtils.createAppOutput("STDERR", null, DataType.STDERR, true, true, null);
        List<OutputDataObjectType> applicationOutputs = new ArrayList<OutputDataObjectType>();
        applicationOutputs.add(output1);
        applicationOutputs.add(output2);
        applicationOutputs.add(output3);
        applicationOutputs.add(output4);
        wrfInterfaceId = airavataClient.registerApplicationInterface(new AuthzToken(""), DEFAULT_GATEWAY, RegisterSampleApplicationsUtils.createApplicationInterfaceDescription(wrfName, wrfDescription, appModules, applicationInputs, applicationOutputs));
        System.out.println("WRF Application Interface Id " + wrfInterfaceId);
    } catch (TException e) {
        e.printStackTrace();
    }
}

Example 84 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class RegisterSampleApplications method registerLocalEchoInterface.

public void registerLocalEchoInterface() {
    try {
        System.out.println("#### Registering Echo Interface #### \n");
        List<String> appModules = new ArrayList<String>();
        appModules.add(echoModuleId);
        InputDataObjectType input1 = RegisterSampleApplicationsUtils.createAppInput("echo_input", "echo_output=Hello World", DataType.STRING, null, 1, false, false, false, "A test string to Echo", null);
        List<InputDataObjectType> applicationInputs = new ArrayList<InputDataObjectType>();
        applicationInputs.add(input1);
        OutputDataObjectType output1 = RegisterSampleApplicationsUtils.createAppOutput("STDOUT", "", DataType.STDOUT, false, false, null);
        OutputDataObjectType output2 = RegisterSampleApplicationsUtils.createAppOutput("STDERR", "", DataType.STDERR, false, false, null);
        List<OutputDataObjectType> applicationOutputs = new ArrayList<OutputDataObjectType>();
        applicationOutputs.add(output1);
        applicationOutputs.add(output2);
        echoLocalInterfaceId = airavataClient.registerApplicationInterface(new AuthzToken(""), DEFAULT_GATEWAY, RegisterSampleApplicationsUtils.createApplicationInterfaceDescription(echoName, echoDescription, appModules, applicationInputs, applicationOutputs));
        System.out.println("Local Echo Application Interface Id " + echoLocalInterfaceId);
    } catch (TException e) {
        e.printStackTrace();
    }
}

Example 85 with AuthzToken

use of org.apache.airavata.model.security.AuthzToken in project airavata by apache.

the class RegisterSampleApplications method registerFSDApps.

public void registerFSDApps() {
    try {
        System.out.println("#### Registering Application Deployments on FSD #### \n");
        // Register Echo
        String echoAppDeployId = airavataClient.registerApplicationDeployment(new AuthzToken(""), DEFAULT_GATEWAY, RegisterSampleApplicationsUtils.createApplicationDeployment(echoModuleId, fsdResourceId, "/bin/echo", ApplicationParallelismType.SERIAL, echoDescription, null, null, null));
        System.out.println("Echo on FSD deployment Id: " + echoAppDeployId);
        // Register MPI
        // String mpiAppDeployId = airavataClient.registerApplicationDeployment(DEFAULT_GATEWAY,
        // RegisterSampleApplicationsUtils.createApplicationDeployment(mpiModuleId, fsdResourceId,
        // "/home/bes/hellompi", ApplicationParallelismType.OPENMP_MPI, mpiDescription, null, null, null));
        String mpiAppDeployId = airavataClient.registerApplicationDeployment(new AuthzToken(""), DEFAULT_GATEWAY, RegisterSampleApplicationsUtils.createApplicationDeployment(mpiModuleId, fsdResourceId, "us_mpi_analysis", ApplicationParallelismType.MPI, mpiDescription, null, null, null));
        System.out.println("MPI on FSD deployment Id: " + mpiAppDeployId);
    } catch (TException e) {
        e.printStackTrace();
    }
}