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Example 31 with BTree

use of org.apache.hyracks.storage.am.btree.impls.BTree in project asterixdb by apache.

the class ExternalRTree method merge.

// The only reason for overriding the merge method is the way to determine
// the need to keep deleted tuples
// This can be done in a better way by creating a method boolean
// keepDeletedTuples(mergedComponents);
@Override
public ILSMDiskComponent merge(ILSMIOOperation operation) throws HyracksDataException {
    LSMRTreeMergeOperation mergeOp = (LSMRTreeMergeOperation) operation;
    IIndexCursor cursor = mergeOp.getCursor();
    ISearchPredicate rtreeSearchPred = new SearchPredicate(null, null);
    ILSMIndexOperationContext opCtx = ((LSMRTreeSortedCursor) cursor).getOpCtx();
    opCtx.getComponentHolder().addAll(mergeOp.getMergingComponents());
    search(opCtx, cursor, rtreeSearchPred);
    LSMRTreeDiskComponent mergedComponent = createDiskComponent(componentFactory, mergeOp.getTarget(), mergeOp.getBTreeTarget(), mergeOp.getBloomFilterTarget(), true);
    // In case we must keep the deleted-keys BTrees, then they must be
    // merged *before* merging the r-trees so that
    // lsmHarness.endSearch() is called once when the r-trees have been
    // merged.
    boolean keepDeleteTuples = false;
    if (version == 0) {
        keepDeleteTuples = mergeOp.getMergingComponents().get(mergeOp.getMergingComponents().size() - 1) != diskComponents.get(diskComponents.size() - 1);
    } else {
        keepDeleteTuples = mergeOp.getMergingComponents().get(mergeOp.getMergingComponents().size() - 1) != secondDiskComponents.get(secondDiskComponents.size() - 1);
    }
    if (keepDeleteTuples) {
        // Keep the deleted tuples since the oldest disk component is not
        // included in the merge operation
        LSMRTreeDeletedKeysBTreeMergeCursor btreeCursor = new LSMRTreeDeletedKeysBTreeMergeCursor(opCtx);
        search(opCtx, btreeCursor, rtreeSearchPred);
        BTree btree = mergedComponent.getBTree();
        IIndexBulkLoader btreeBulkLoader = btree.createBulkLoader(1.0f, true, 0L, false);
        long numElements = 0L;
        for (int i = 0; i < mergeOp.getMergingComponents().size(); ++i) {
            numElements += ((LSMRTreeDiskComponent) mergeOp.getMergingComponents().get(i)).getBloomFilter().getNumElements();
        }
        int maxBucketsPerElement = BloomCalculations.maxBucketsPerElement(numElements);
        BloomFilterSpecification bloomFilterSpec = BloomCalculations.computeBloomSpec(maxBucketsPerElement, bloomFilterFalsePositiveRate);
        IIndexBulkLoader builder = mergedComponent.getBloomFilter().createBuilder(numElements, bloomFilterSpec.getNumHashes(), bloomFilterSpec.getNumBucketsPerElements());
        try {
            while (btreeCursor.hasNext()) {
                btreeCursor.next();
                ITupleReference tuple = btreeCursor.getTuple();
                btreeBulkLoader.add(tuple);
                builder.add(tuple);
            }
        } finally {
            btreeCursor.close();
            builder.end();
        }
        btreeBulkLoader.end();
    }
    IIndexBulkLoader bulkLoader = mergedComponent.getRTree().createBulkLoader(1.0f, false, 0L, false);
    try {
        while (cursor.hasNext()) {
            cursor.next();
            ITupleReference frameTuple = cursor.getTuple();
            bulkLoader.add(frameTuple);
        }
    } finally {
        cursor.close();
    }
    bulkLoader.end();
    return mergedComponent;
}
Also used : BTree(org.apache.hyracks.storage.am.btree.impls.BTree) ILSMIndexOperationContext(org.apache.hyracks.storage.am.lsm.common.api.ILSMIndexOperationContext) SearchPredicate(org.apache.hyracks.storage.am.rtree.impls.SearchPredicate) ISearchPredicate(org.apache.hyracks.storage.common.ISearchPredicate) IIndexBulkLoader(org.apache.hyracks.storage.common.IIndexBulkLoader) ITupleReference(org.apache.hyracks.dataflow.common.data.accessors.ITupleReference) IIndexCursor(org.apache.hyracks.storage.common.IIndexCursor) ISearchPredicate(org.apache.hyracks.storage.common.ISearchPredicate) BloomFilterSpecification(org.apache.hyracks.storage.am.bloomfilter.impls.BloomFilterSpecification)

Example 32 with BTree

use of org.apache.hyracks.storage.am.btree.impls.BTree in project asterixdb by apache.

the class ExternalRTree method deactivate.

@Override
public void deactivate(boolean flushOnExit) throws HyracksDataException {
    if (!isActive) {
        throw new HyracksDataException("Failed to deactivate the index since it is already deactivated.");
    }
    if (flushOnExit) {
        BlockingIOOperationCallbackWrapper cb = new BlockingIOOperationCallbackWrapper(ioOpCallback);
        cb.afterFinalize(LSMOperationType.FLUSH, null);
    }
    for (ILSMComponent c : diskComponents) {
        LSMRTreeDiskComponent component = (LSMRTreeDiskComponent) c;
        RTree rtree = component.getRTree();
        BTree btree = component.getBTree();
        BloomFilter bloomFilter = component.getBloomFilter();
        rtree.deactivateCloseHandle();
        btree.deactivateCloseHandle();
        bloomFilter.deactivate();
    }
    for (ILSMComponent c : secondDiskComponents) {
        // Only deactivate non shared components
        if (!diskComponents.contains(c)) {
            LSMRTreeDiskComponent component = (LSMRTreeDiskComponent) c;
            RTree rtree = component.getRTree();
            BTree btree = component.getBTree();
            BloomFilter bloomFilter = component.getBloomFilter();
            rtree.deactivateCloseHandle();
            btree.deactivateCloseHandle();
            bloomFilter.deactivate();
        }
    }
    isActive = false;
}
Also used : ILSMComponent(org.apache.hyracks.storage.am.lsm.common.api.ILSMComponent) BTree(org.apache.hyracks.storage.am.btree.impls.BTree) BlockingIOOperationCallbackWrapper(org.apache.hyracks.storage.am.lsm.common.impls.BlockingIOOperationCallbackWrapper) RTree(org.apache.hyracks.storage.am.rtree.impls.RTree) HyracksDataException(org.apache.hyracks.api.exceptions.HyracksDataException) BloomFilter(org.apache.hyracks.storage.am.bloomfilter.impls.BloomFilter)

Aggregations

BTree (org.apache.hyracks.storage.am.btree.impls.BTree)32 ILSMComponent (org.apache.hyracks.storage.am.lsm.common.api.ILSMComponent)13 IBTreeLeafFrame (org.apache.hyracks.storage.am.btree.api.IBTreeLeafFrame)12 BTreeNSMInteriorFrameFactory (org.apache.hyracks.storage.am.btree.frames.BTreeNSMInteriorFrameFactory)12 ITreeIndexFrameFactory (org.apache.hyracks.storage.am.common.api.ITreeIndexFrameFactory)12 BTreeNSMLeafFrameFactory (org.apache.hyracks.storage.am.btree.frames.BTreeNSMLeafFrameFactory)11 HyracksDataException (org.apache.hyracks.api.exceptions.HyracksDataException)10 IBinaryComparatorFactory (org.apache.hyracks.api.dataflow.value.IBinaryComparatorFactory)9 BTreeRangeSearchCursor (org.apache.hyracks.storage.am.btree.impls.BTreeRangeSearchCursor)8 ITreeIndexAccessor (org.apache.hyracks.storage.am.common.api.ITreeIndexAccessor)8 BloomFilter (org.apache.hyracks.storage.am.bloomfilter.impls.BloomFilter)7 TypeAwareTupleWriterFactory (org.apache.hyracks.storage.am.common.tuples.TypeAwareTupleWriterFactory)7 RTree (org.apache.hyracks.storage.am.rtree.impls.RTree)7 ITypeTraits (org.apache.hyracks.api.dataflow.value.ITypeTraits)6 ArrayTupleBuilder (org.apache.hyracks.dataflow.common.comm.io.ArrayTupleBuilder)5 BloomFilterFactory (org.apache.hyracks.storage.am.bloomfilter.impls.BloomFilterFactory)5 AbstractBTreeTest (org.apache.hyracks.storage.am.btree.util.AbstractBTreeTest)5 IMetadataPageManager (org.apache.hyracks.storage.am.common.api.IMetadataPageManager)5 LinkedMetaDataPageManager (org.apache.hyracks.storage.am.common.freepage.LinkedMetaDataPageManager)5 ILSMIndexFileManager (org.apache.hyracks.storage.am.lsm.common.api.ILSMIndexFileManager)5