Examples with Dictionary org.broadinstitute.consent.http.models.Dictionary used on opensource projects

Example 1 with Dictionary

use of org.broadinstitute.consent.http.models.Dictionary in project consent by DataBiosphere.

the class DatasetResource method downloadDataSets.

@POST
@Path("/download")
@Consumes(MediaType.APPLICATION_JSON)
@Produces(MediaType.APPLICATION_JSON)
@PermitAll
public Response downloadDataSets(List<Integer> idList) {
    try {
        String msg = "GETing DataSets to download";
        logger().debug(msg);
        JSONObject json = new JSONObject();
        Collection<Dictionary> headers = datasetService.describeDictionaryByReceiveOrder();
        StringBuilder sb = new StringBuilder();
        String TSV_DELIMITER = "\t";
        for (Dictionary header : headers) {
            if (sb.length() > 0)
                sb.append(TSV_DELIMITER);
            sb.append(header.getKey());
        }
        sb.append(END_OF_LINE);
        if (CollectionUtils.isEmpty(idList)) {
            json.put("datasets", sb.toString());
            return Response.ok(json.toString(), MediaType.APPLICATION_JSON).build();
        }
        Collection<DatasetDTO> rows = datasetService.describeDataSetsByReceiveOrder(idList);
        for (DatasetDTO row : rows) {
            StringBuilder sbr = new StringBuilder();
            DataSetPropertyDTO property = new DataSetPropertyDTO("Consent ID", row.getConsentId());
            List<DataSetPropertyDTO> props = row.getProperties();
            props.add(property);
            for (DataSetPropertyDTO prop : props) {
                if (sbr.length() > 0)
                    sbr.append(TSV_DELIMITER);
                sbr.append(prop.getPropertyValue());
            }
            sbr.append(END_OF_LINE);
            sb.append(sbr);
        }
        String tsv = sb.toString();
        json.put("datasets", tsv);
        return Response.ok(json.toString(), MediaType.APPLICATION_JSON).build();
    } catch (Exception e) {
        return createExceptionResponse(e);
    }
}

Example 2 with Dictionary

use of org.broadinstitute.consent.http.models.Dictionary in project consent by DataBiosphere.

the class DatasetService method processDatasetProperties.

public List<DataSetProperty> processDatasetProperties(Integer datasetId, List<DataSetPropertyDTO> properties) {
    Date now = new Date();
    List<Dictionary> dictionaries = datasetDAO.getMappedFieldsOrderByReceiveOrder();
    List<String> keys = dictionaries.stream().map(Dictionary::getKey).collect(Collectors.toList());
    return properties.stream().filter(p -> keys.contains(p.getPropertyName()) && !p.getPropertyName().equals(DATASET_NAME_KEY)).map(p -> new DataSetProperty(datasetId, dictionaries.get(keys.indexOf(p.getPropertyName())).getKeyId(), p.getPropertyValue(), now)).collect(Collectors.toList());
}