Examples with FileChooserFilter org.cytoscape.util.swing.FileChooserFilter used on opensource projects

Example 1 with FileChooserFilter

use of org.cytoscape.util.swing.FileChooserFilter in project EnrichmentMapApp by BaderLab.

the class ExportTXTAction method promptForFile.

private File promptForFile() {
    List<FileChooserFilter> filter = Collections.singletonList(new FileChooserFilter("txt Files", "txt"));
    File file = fileUtil.getFile(jframeProvider.get(), "Export Heatmap as txt File", FileUtil.SAVE, filter);
    if (file == null)
        return null;
    String fileName = file.toString();
    if (!fileName.endsWith(".txt")) {
        fileName += ".txt";
        file = new File(fileName);
    }
    return file;
}

Example 2 with FileChooserFilter

use of org.cytoscape.util.swing.FileChooserFilter in project EnrichmentMapApp by BaderLab.

the class ExportPDFAction method actionPerformed.

@Override
public void actionPerformed(ActionEvent e) {
    List<FileChooserFilter> filter = Collections.singletonList(new FileChooserFilter("pdf Files", "pdf"));
    File file = fileUtil.getFile(jframeProvider.get(), "Export Heatmap as PDF File", FileUtil.SAVE, filter);
    if (file != null) {
        String fileName = file.toString();
        if (!fileName.endsWith(".pdf")) {
            fileName += ".pdf";
            file = new File(fileName);
        }
        HeatMapExporterTask task = new HeatMapExporterTask(file);
        dialogTaskManager.execute(new TaskIterator(task));
    }
}

Example 3 with FileChooserFilter

use of org.cytoscape.util.swing.FileChooserFilter in project cytoscape-impl by cytoscape.

the class DataSourceSelectDialog method browseButtonActionPerformed.

private void browseButtonActionPerformed(ActionEvent evt) {
    File file = null;
    final FileUtil fileUtil = serviceRegistrar.getService(FileUtil.class);
    if (sourceType == ONTOLOGY_TYPE) {
        final FileChooserFilter filter = new FileChooserFilter("OBO File", "obo");
        List<FileChooserFilter> filterCollection = new ArrayList<FileChooserFilter>(1);
        filterCollection.add(filter);
        file = fileUtil.getFile(this.getParent(), "Select OBO Source File", FileUtil.LOAD, filterCollection);
    } else {
        // Currently, there is no pre-defined extension for this file type.
        final List<FileChooserFilter> filterCollection = new ArrayList<FileChooserFilter>();
        file = fileUtil.getFile(this.getParent(), "Select Gene Annotation Source File", FileUtil.LOAD, filterCollection);
    }
    if (file == null)
        return;
    sourceFileName = file.getName();
    if (sourceType == ONTOLOGY_TYPE) {
        ontologyNameTextField.setText("Local Ontology File: " + sourceFileName);
    } else {
        ontologyNameTextField.setText("Local Annotation File: " + sourceFileName);
    }
    try {
        dataSourceTextField.setText(file.toURI().toURL().toString());
    } catch (MalformedURLException e) {
        e.printStackTrace();
    }
    this.toFront();
}

Example 4 with FileChooserFilter

use of org.cytoscape.util.swing.FileChooserFilter in project EnrichmentMapApp by BaderLab.

the class PostAnalysisInputPanel method chooseGMTFile.

protected File chooseGMTFile(JFormattedTextField textField) {
    FileChooserFilter filter = new FileChooserFilter("All GMT Files", "gmt");
    List<FileChooserFilter> all_filters = Arrays.asList(filter);
    // Get the file name
    File file = fileUtil.getFile(SwingUtil.getWindowInstance(this), "Import Signature GMT File", FileUtil.LOAD, all_filters);
    if (file != null) {
        String absolutePath = file.getAbsolutePath();
        textField.setForeground(PostAnalysisInputPanel.checkFile(absolutePath));
        textField.setText(absolutePath);
        textField.setValue(absolutePath);
        textField.setToolTipText(absolutePath);
        textField.setCaretPosition(textField.getText().length());
    }
    return file;
}

Example 5 with FileChooserFilter

use of org.cytoscape.util.swing.FileChooserFilter in project cytoscape-impl by cytoscape.

the class SupportedFileTypesManager method getSupportedFileTypes.

private List<FileChooserFilter> getSupportedFileTypes(final DataCategory category, final Set<CyFileFilterProvider> factories) {
    List<FileChooserFilter> types = new ArrayList<FileChooserFilter>();
    Set<String> allExtensions = new HashSet<String>();
    for (final CyFileFilterProvider factory : factories) {
        CyFileFilter filter = factory.getFileFilter();
        // this is a hack to exclude internal session table format
        if (filter.getExtensions().contains("cytable") || filter.getDataCategory() != category)
            continue;
        String description = filter.getDescription();
        Set<String> filterExtensions = filter.getExtensions();
        String[] extensions = new String[filterExtensions.size()];
        int index = 0;
        for (String extension : filterExtensions) {
            allExtensions.add(extension);
            extensions[index] = extension;
            index++;
        }
        types.add(new FileChooserFilter(description, extensions));
    }
    if (types.isEmpty())
        return types;
    Collections.sort(types, new Comparator<FileChooserFilter>() {

        @Override
        public int compare(FileChooserFilter o1, FileChooserFilter o2) {
            return o1.getDescription().compareTo(o2.getDescription());
        }
    });
    String description = String.format("All %1$s files", category.getDisplayName().toLowerCase());
    types.add(new FileChooserFilter(description, new ArrayList<String>(allExtensions).toArray(new String[allExtensions.size()])));
    return types;
}