Examples with JSONResult org.cytoscape.work.json.JSONResult used on opensource projects

Example 1 with JSONResult

use of org.cytoscape.work.json.JSONResult in project cytoscape-impl by cytoscape.

the class TunableAbstractCyWriter method getResults.

@Override
@SuppressWarnings({ "rawtypes", "unchecked" })
public Object getResults(Class type) {
    if (type == String.class) {
        String res = null;
        if (// TODO: should check if file exists
        outputFile != null)
            /*&& outputFile.exists()*/
            res = "Output File: " + outputFile.getAbsolutePath();
        return res;
    }
    if (type == JSONResult.class) {
        JsonObject jsonObj = new JsonObject();
        jsonObj.addProperty("file", outputFile != null ? /*&& outputFile.exists()*/
        outputFile.getAbsolutePath() : null);
        String json = new Gson().toJson(jsonObj);
        JSONResult res = () -> {
            return json;
        };
        return res;
    }
    return outputFile;
}

Example 2 with JSONResult

use of org.cytoscape.work.json.JSONResult in project cytoscape-impl by cytoscape.

the class DestroyNetworkTask method getResults.

@Override
public Object getResults(Class type) {
    if (localNets == null)
        return null;
    if (type.equals(String.class)) {
        String res = "Destroyed network";
        if (localNets.size() > 1)
            res += "s";
        res += ":\n";
        for (CyNetwork net : localNets) res += "    " + net.toString() + "\n";
        return res;
    } else if (type.equals(CyNetwork.class)) {
        return localNets.get(0);
    } else if (type.equals(List.class)) {
        return localNets;
    } else if (type.equals(JSONResult.class)) {
        JSONResult res = () -> {
            if (localNets == null)
                return "{}";
            else {
                return "{\"network\":" + localNets.get(0).getSUID() + "}";
            }
        };
        return res;
    }
    return null;
}

Example 3 with JSONResult

use of org.cytoscape.work.json.JSONResult in project cytoscape-impl by cytoscape.

the class UnHideCommandTask method getResults.

public Object getResults(Class type) {
    List<CyIdentifiable> identifiables = new ArrayList<>();
    if (nodes != null)
        identifiables.addAll(nodes);
    if (edges != null)
        identifiables.addAll(edges);
    if (type.equals(List.class)) {
        return identifiables;
    } else if (type.equals(String.class)) {
        if (identifiables.size() == 0)
            return "<none>";
        String ret = "";
        if (nodes != null && nodes.size() > 0) {
            ret += "Nodes unhidden: \n";
            for (CyNode node : nodes) {
                ret += "   " + network.getRow(node).get(CyNetwork.NAME, String.class) + "\n";
            }
        }
        if (edges != null && edges.size() > 0) {
            ret += "Edges unhidden: \n";
            for (CyEdge edge : edges) {
                ret += "   " + network.getRow(edge).get(CyNetwork.NAME, String.class) + "\n";
            }
        }
        return ret;
    } else if (type.equals(JSONResult.class)) {
        JSONResult res = () -> {
            if (identifiables == null || identifiables.size() == 0)
                return "{}";
            else {
                CyJSONUtil cyJSONUtil = serviceRegistrar.getService(CyJSONUtil.class);
                String result = "{\"nodes\":";
                if (nodes == null || nodes.size() == 0)
                    result += "[]";
                else
                    result += cyJSONUtil.cyIdentifiablesToJson(nodes);
                result += ", \"edges\":";
                if (edges == null || edges.size() == 0)
                    result += "[]";
                else
                    result += cyJSONUtil.cyIdentifiablesToJson(edges);
                result += "}";
                return result;
            }
        };
        return res;
    }
    return identifiables;
}

Example 4 with JSONResult

use of org.cytoscape.work.json.JSONResult in project cytoscape-impl by cytoscape.

the class ListNetworkViewsTask method getResults.

@Override
@SuppressWarnings({ "unchecked", "rawtypes" })
public Object getResults(Class type) {
    if (type == String.class)
        return DataUtils.convertData(views);
    if (type == JSONResult.class) {
        String json = serviceRegistrar.getService(CyJSONUtil.class).cyIdentifiablesToJson(views);
        JSONResult res = () -> {
            return "{\"views\":" + json + "}";
        };
        return res;
    }
    return views;
}

Example 5 with JSONResult

use of org.cytoscape.work.json.JSONResult in project cytoscape-impl by cytoscape.

the class SelectTask method getResults.

public Object getResults(Class type) {
    List<CyIdentifiable> identifiables = new ArrayList();
    if (selectedNodes != null)
        identifiables.addAll(selectedNodes);
    if (selectedEdges != null)
        identifiables.addAll(selectedEdges);
    if (type.equals(List.class)) {
        return identifiables;
    } else if (type.equals(String.class)) {
        if (identifiables.size() == 0)
            return "<none>";
        String ret = "";
        if (selectedNodes != null && selectedNodes.size() > 0) {
            ret += "Nodes selected: \n";
            for (CyNode node : selectedNodes) {
                ret += "   " + network.getRow(node).get(CyNetwork.NAME, String.class) + "\n";
            }
        }
        if (selectedEdges != null && selectedEdges.size() > 0) {
            ret += "Edges selected: \n";
            for (CyEdge edge : selectedEdges) {
                ret += "   " + network.getRow(edge).get(CyNetwork.NAME, String.class) + "\n";
            }
        }
        return ret;
    } else if (type.equals(JSONResult.class)) {
        JSONResult res = () -> {
            if (identifiables == null || identifiables.size() == 0)
                return "{}";
            else {
                CyJSONUtil cyJSONUtil = registrar.getService(CyJSONUtil.class);
                String result = "{\"nodes\":";
                if (selectedNodes == null || selectedNodes.size() == 0)
                    result += "[]";
                else
                    result += cyJSONUtil.cyIdentifiablesToJson(selectedNodes);
                result += ", \"edges\":";
                if (selectedEdges == null || selectedEdges.size() == 0)
                    result += "[]";
                else
                    result += cyJSONUtil.cyIdentifiablesToJson(selectedEdges);
                return result + "}";
            }
        };
        return res;
    }
    return identifiables;
}