Examples with ListSingleSelection org.cytoscape.work.util.ListSingleSelection used on opensource projects

Example 21 with ListSingleSelection

use of org.cytoscape.work.util.ListSingleSelection in project cytoscape-impl by cytoscape.

the class CyGroupAggregationSettings method getAttrType.

@Tunable(description = "Attribute Type:", groups = { "Attribute Aggregation Settings", "Aggregation Overrides" }, dependsOn = "enableAttributeAggregation=true", listenForChange = { "AttrSelection" }, gravity = 21.0)
public String getAttrType() {
    if (currentNetwork == null || attrSelection == null || attrSelection.getSelectedValue() == null || attrSelection.getSelectedValue().length() == 0) {
        if (aggregationType != null)
            aggregationType.setPossibleValues(cyAggManager.getAggregators(NoneAggregator.class));
        else
            aggregationType = new ListSingleSelection<Aggregator<?>>(cyAggManager.getAggregators(NoneAggregator.class));
        return "-- No Network --";
    }
    // Get the attribute from the selection
    String columnName = attrSelection.getSelectedValue();
    CyTable nodeTable = currentNetwork.getDefaultNodeTable();
    CyColumn column = nodeTable.getColumn(columnName);
    if (column == null)
        return "-- No Such Column -- ";
    if (aggregationType != null) {
        if (column.getType().equals(List.class))
            aggregationType.setPossibleValues(cyAggManager.getListAggregators(column.getListElementType()));
        else
            aggregationType.setPossibleValues(cyAggManager.getAggregators(column.getType()));
    } else {
        if (column.getType().equals(List.class))
            aggregationType = new ListSingleSelection<Aggregator<?>>(cyAggManager.getListAggregators(column.getListElementType()));
        else
            aggregationType = new ListSingleSelection<Aggregator<?>>(cyAggManager.getAggregators(column.getType()));
    }
    // if (aggregationType.getSelectedValue() == null) {
    if (group == null) {
        Aggregator<?> type = settings.getOverrideAggregation(column);
        if (type != null)
            aggregationType.setSelectedValue(type);
    } else {
        Aggregator<?> type = settings.getOverrideAggregation(group, column);
        if (type != null)
            aggregationType.setSelectedValue(type);
    }
    // }
    // Get it's type
    String t = column.getType().getSimpleName();
    if (column.getType().equals(List.class))
        t += " of " + column.getListElementType().getSimpleName() + "s";
    return t;
}

Example 22 with ListSingleSelection

use of org.cytoscape.work.util.ListSingleSelection in project cytoscape-impl by cytoscape.

the class FilterIO method applyParameter.

@SuppressWarnings({ "unchecked", "rawtypes" })
private static void applyParameter(String name, Object value, Transformer<?, ?> transformer, Map<String, PropertyInfo> properties) {
    PropertyInfo info = properties.get(name);
    if (info == null) {
        return;
    }
    if (value == null) {
        info.set(transformer, value);
        return;
    }
    Class<?> targetType = info.type;
    Class<?> sourceType = value.getClass();
    if (targetType == ListSingleSelection.class) {
        ListSingleSelection list = (ListSingleSelection) info.get(transformer);
        if (list != null) {
            list.setSelectedValue(value);
        }
    } else if (targetType == ListMultipleSelection.class && value instanceof List) {
        ListMultipleSelection list = (ListMultipleSelection) info.get(transformer);
        if (list != null) {
            list.setSelectedValues((List) value);
        }
    } else {
        Object convertedValue = convertValue(name, value, sourceType, targetType);
        info.set(transformer, convertedValue);
    }
}

Example 23 with ListSingleSelection

use of org.cytoscape.work.util.ListSingleSelection in project clusterMaker2 by RBVI.

the class HairCutContext method setNetwork.

public void setNetwork(CyNetwork network) {
    if (this.network != null && this.network.equals(network))
        // Nothing to see here....
        return;
    this.network = network;
    List<String> integerColumns = super.getClusterAttributeList(network);
    if (integerColumns != null) {
        clusterAttribute = new ListSingleSelection(integerColumns);
        String defaultAttribute = super.getDefaultAttribute(network);
        if (integerColumns.contains(defaultAttribute))
            clusterAttribute.setSelectedValue(defaultAttribute);
    }
}

Example 24 with ListSingleSelection

use of org.cytoscape.work.util.ListSingleSelection in project cytoscape-api by cytoscape.

the class AbstractCyNetworkReader method init.

private void init() {
    name2RootMap = getRootNetworkMap();
    nodeMap = new HashMap<>(10000);
    // initialize the network Collection
    final List<String> rootNames = new ArrayList<>();
    rootNames.addAll(name2RootMap.keySet());
    if (!rootNames.isEmpty()) {
        sort(rootNames);
        rootNames.add(0, CREATE_NEW_COLLECTION_STRING);
    }
    final ListSingleSelection<String> rootNetList = new ListSingleSelection<>(rootNames);
    final CyNetwork net = cyApplicationManager != null ? cyApplicationManager.getCurrentNetwork() : null;
    final CyRootNetwork rootNet = net != null ? cyRootNetworkManager.getRootNetwork(net) : null;
    final String name = rootNet != null ? rootNet.getRow(rootNet).get(CyRootNetwork.NAME, String.class) : CREATE_NEW_COLLECTION_STRING;
    if (rootNames.contains(name))
        rootNetList.setSelectedValue(name);
    else if (rootNames.contains(CREATE_NEW_COLLECTION_STRING))
        rootNetList.setSelectedValue(CREATE_NEW_COLLECTION_STRING);
    setRootNetworkList(rootNetList);
    // initialize renderer list
    final List<NetworkViewRenderer> renderers = new ArrayList<>();
    NetworkViewRenderer defViewRenderer = null;
    if (cyApplicationManager != null) {
        final Set<NetworkViewRenderer> rendererSet = cyApplicationManager.getNetworkViewRendererSet();
        // so the combo-box does not appear to the user, since there is nothing to select anyway.
        if (rendererSet.size() > 1) {
            renderers.addAll(rendererSet);
            Collections.sort(renderers, new Comparator<NetworkViewRenderer>() {

                @Override
                public int compare(NetworkViewRenderer r1, NetworkViewRenderer r2) {
                    return r1.toString().compareToIgnoreCase(r2.toString());
                }
            });
        }
        defViewRenderer = cyApplicationManager.getDefaultNetworkViewRenderer();
    }
    rendererList = new ListSingleSelection<>(renderers);
    if (defViewRenderer != null && renderers.contains(defViewRenderer))
        rendererList.setSelectedValue(defViewRenderer);
}