Example 1 with DatasetRegistryZenodo
use of org.globalbioticinteractions.dataset.DatasetRegistryZenodo in project eol-globi-data by jhpoelen.
the class DatasetImporterFactoryImplIT method defaultTSVImporterCachedZenodo.
@Test
public void defaultTSVImporterCachedZenodo() throws StudyImporterException, DatasetRegistryException {
final DatasetRegistry datasetRegistry = new DatasetRegistryWithCache(new DatasetRegistryZenodo(inStream -> inStream), dataset -> CacheUtil.cacheFor(dataset.getNamespace(), "target/datasets", inStream -> inStream));
DatasetImporter importer = getTemplateImporter(datasetRegistry, "globalbioticinteractions/template-dataset");
DatasetImporterForTSV importerTSV = (DatasetImporterForTSV) importer;
assertThat(importerTSV.getSourceCitation(), containsString("doi.org"));
}
Also used :
CacheUtil(org.globalbioticinteractions.cache.CacheUtil)
DatasetImporterForGoMexSI2(org.eol.globi.data.DatasetImporterForGoMexSI2)
DatasetRegistryGitHubRemote(org.globalbioticinteractions.dataset.DatasetRegistryGitHubRemote)
IsInstanceOf.instanceOf(org.hamcrest.core.IsInstanceOf.instanceOf)
DatasetImporterForHurlbert(org.eol.globi.data.DatasetImporterForHurlbert)
DatasetConstant(org.globalbioticinteractions.dataset.DatasetConstant)
DatasetImporterForMetaTable(org.eol.globi.data.DatasetImporterForMetaTable)
DatasetImporterForHafner(org.eol.globi.data.DatasetImporterForHafner)
DatasetImporterForSzoboszlai(org.eol.globi.data.DatasetImporterForSzoboszlai)
StudyImporterException(org.eol.globi.data.StudyImporterException)
BaseDatasetImporter(org.eol.globi.data.BaseDatasetImporter)
Is.is(org.hamcrest.core.Is.is)
JsonNode(com.fasterxml.jackson.databind.JsonNode)
DatasetImporter(org.eol.globi.data.DatasetImporter)
DatasetImporterForJSONLD(org.eol.globi.data.DatasetImporterForJSONLD)
URI(java.net.URI)
MatcherAssert.assertThat(org.hamcrest.MatcherAssert.assertThat)
StringStartsWith.startsWith(org.hamcrest.core.StringStartsWith.startsWith)
DatasetRegistry(org.globalbioticinteractions.dataset.DatasetRegistry)
DatasetRegistryZenodo(org.globalbioticinteractions.dataset.DatasetRegistryZenodo)
DatasetRegistryException(org.globalbioticinteractions.dataset.DatasetRegistryException)
Assert.assertNotNull(org.junit.Assert.assertNotNull)
Test(org.junit.Test)
IOException(java.io.IOException)
DatasetImporterForCoetzer(org.eol.globi.data.DatasetImporterForCoetzer)
DatasetRegistryGitHubArchive(org.globalbioticinteractions.dataset.DatasetRegistryGitHubArchive)
DatasetImporterForPlanque(org.eol.globi.data.DatasetImporterForPlanque)
DatasetImporterForTSV(org.eol.globi.data.DatasetImporterForTSV)
DatasetFactory(org.globalbioticinteractions.dataset.DatasetFactory)
Dataset(org.globalbioticinteractions.dataset.Dataset)
DatasetImporterForRSS(org.eol.globi.data.DatasetImporterForRSS)
IsNull.notNullValue(org.hamcrest.core.IsNull.notNullValue)
DatasetImporterForWood(org.eol.globi.data.DatasetImporterForWood)
DatasetRegistryWithCache(org.globalbioticinteractions.dataset.DatasetRegistryWithCache)
Matchers.containsString(org.hamcrest.Matchers.containsString)
InputStream(java.io.InputStream)
DatasetImporterForTSV(org.eol.globi.data.DatasetImporterForTSV)
DatasetRegistryZenodo(org.globalbioticinteractions.dataset.DatasetRegistryZenodo)
DatasetRegistry(org.globalbioticinteractions.dataset.DatasetRegistry)
DatasetRegistryWithCache(org.globalbioticinteractions.dataset.DatasetRegistryWithCache)
BaseDatasetImporter(org.eol.globi.data.BaseDatasetImporter)
DatasetImporter(org.eol.globi.data.DatasetImporter)
Test(org.junit.Test)
Aggregations
JsonNode (com.fasterxml.jackson.databind.JsonNode)1
IOException (java.io.IOException)1
InputStream (java.io.InputStream)1
URI (java.net.URI)1
BaseDatasetImporter (org.eol.globi.data.BaseDatasetImporter)1
DatasetImporter (org.eol.globi.data.DatasetImporter)1
DatasetImporterForCoetzer (org.eol.globi.data.DatasetImporterForCoetzer)1
DatasetImporterForGoMexSI2 (org.eol.globi.data.DatasetImporterForGoMexSI2)1
DatasetImporterForHafner (org.eol.globi.data.DatasetImporterForHafner)1
DatasetImporterForHurlbert (org.eol.globi.data.DatasetImporterForHurlbert)1
DatasetImporterForJSONLD (org.eol.globi.data.DatasetImporterForJSONLD)1
DatasetImporterForMetaTable (org.eol.globi.data.DatasetImporterForMetaTable)1
DatasetImporterForPlanque (org.eol.globi.data.DatasetImporterForPlanque)1
DatasetImporterForRSS (org.eol.globi.data.DatasetImporterForRSS)1
DatasetImporterForSzoboszlai (org.eol.globi.data.DatasetImporterForSzoboszlai)1
DatasetImporterForTSV (org.eol.globi.data.DatasetImporterForTSV)1
DatasetImporterForWood (org.eol.globi.data.DatasetImporterForWood)1
StudyImporterException (org.eol.globi.data.StudyImporterException)1
CacheUtil (org.globalbioticinteractions.cache.CacheUtil)1
Dataset (org.globalbioticinteractions.dataset.Dataset)1
