Examples with DateTime org.hl7.elm.r1.DateTime used on opensource projects

Example 96 with DateTime

use of org.hl7.elm.r1.DateTime in project odm2fhir by num-codex.

the class OrganRecipient method createCondition.

private Condition createCondition(ItemData transplantCoding) {
    var condition = (Condition) new Condition().addIdentifier(createIdentifier(CONDITION, transplantCoding)).setRecordedDateElement(// TODO Set actual DateTime value
    UNKNOWN_DATE_TIME).addCategory(createCodeableConcept(createCoding(SNOMED_CT, "788415003", "Transplant medicine (qualifier value)"))).setMeta(createMeta(ORGAN_RECIPIENT));
    var codeCodeableConcept = new CodeableConcept();
    var bodySiteCodeableConcept = new CodeableConcept();
    for (var coding : createCodings(transplantCoding)) {
        switch(coding.getCode()) {
            case // YES
            "410605003":
                condition.setClinicalStatus(ACTIVE).setVerificationStatus(CONFIRMED);
                break;
            case // NO
            "410594000":
                condition.setVerificationStatus(REFUTED);
                break;
            case // UNKNOWN
            "261665006":
                condition.addModifierExtension(DATA_PRESENCE_UNKNOWN);
                break;
            default:
                if (ICD_10_GM.getUrl().equals(coding.getSystem())) {
                    // add ICD Code
                    codeCodeableConcept.addCoding(coding);
                } else if (SNOMED_CT.getUrl().equals(coding.getSystem())) {
                    // add SNOMED Code of bodySite
                    bodySiteCodeableConcept.addCoding(coding);
                }
        }
    }
    if (!bodySiteCodeableConcept.isEmpty()) {
        condition.addBodySite(bodySiteCodeableConcept);
    }
    // bodySite CAN be empty, but Code MUST NOT be empty
    return codeCodeableConcept.isEmpty() ? new Condition() : condition.setCode(codeCodeableConcept);
}

Example 97 with DateTime

use of org.hl7.elm.r1.DateTime in project pathling by aehrc.

the class DateTimePath method valueFromRow.

/**
 * Gets a value from a row for a DateTime or DateTime literal.
 *
 * @param row The {@link Row} from which to extract the value
 * @param columnNumber The column number to extract the value from
 * @param fhirType The FHIR type to assume when extracting the value
 * @return A {@link BaseDateTimeType}, or the absence of a value
 */
@Nonnull
public static Optional<BaseDateTimeType> valueFromRow(@Nonnull final Row row, final int columnNumber, final FHIRDefinedType fhirType) {
    if (row.isNullAt(columnNumber)) {
        return Optional.empty();
    }
    if (fhirType == FHIRDefinedType.INSTANT) {
        final InstantType value = new InstantType(row.getTimestamp(columnNumber));
        value.setTimeZone(TIME_ZONE);
        return Optional.of(value);
    } else {
        final DateTimeType value = new DateTimeType(row.getString(columnNumber));
        value.setTimeZone(TIME_ZONE);
        return Optional.of(value);
    }
}

Example 98 with DateTime

use of org.hl7.elm.r1.DateTime in project quality-measure-and-cohort-service by Alvearie.

the class CQLToFHIRMeasureReportHelperTest method testIntervalDateTime_shouldReturnPeriodInUTC.

@Test
public void testIntervalDateTime_shouldReturnPeriodInUTC() {
    DateTime startDateTime = new DateTime(OffsetDateTime.of(LocalDateTime.of(2020, 1, 1, 0, 10, 5, 0), ZoneOffset.of("Z")));
    DateTime endDateTime = new DateTime(OffsetDateTime.of(LocalDateTime.of(2020, 2, 15, 15, 10, 0, 0), ZoneOffset.of("+01:00")));
    Interval interval = new Interval(startDateTime, true, endDateTime, true);
    IBaseDatatype fhirTypeValue = CQLToFHIRMeasureReportHelper.getFhirTypeValue(interval);
    // Expect output expressed in UTC
    DateTimeType expectedStart = new DateTimeType("2020-01-01T00:10:05+00:00");
    DateTimeType expectedEnd = new DateTimeType("2020-02-15T14:10:00+00:00");
    assertTrue(fhirTypeValue instanceof Period);
    Period castResult = (Period) fhirTypeValue;
    assertEquals(expectedStart.toHumanDisplay(), castResult.getStartElement().toHumanDisplay());
    assertEquals(expectedEnd.toHumanDisplay(), castResult.getEndElement().toHumanDisplay());
}

Example 99 with DateTime

use of org.hl7.elm.r1.DateTime in project quality-measure-and-cohort-service by Alvearie.

the class CQLToFHIRMeasureReportHelperTest method testDateTime_returnsSameDateTimeInUTC.

@Test
public void testDateTime_returnsSameDateTimeInUTC() {
    String inputDateTimeString = "2020-01-02T00:00:00.000-04:00";
    DateTime expected = new DateTime(inputDateTimeString, OffsetDateTime.now().getOffset());
    IBaseDatatype fhirTypeValue = CQLToFHIRMeasureReportHelper.getFhirTypeValue(expected);
    assertTrue(fhirTypeValue instanceof DateTimeType);
    assertEquals("2020-01-02T04:00:00.000+00:00", ((DateTimeType) fhirTypeValue).getValueAsString());
}

Example 100 with DateTime

use of org.hl7.elm.r1.DateTime in project quality-measure-and-cohort-service by Alvearie.

the class R4ParameterDefinitionWithDefaultToCohortParameterConverterTest method testDateTimeWithTimezone__shouldReturnDatetimeParameter.

@Test
public void testDateTimeWithTimezone__shouldReturnDatetimeParameter() {
    ParameterDefinition parameterDefinition = getBaseParameterDefinition("dateTime");
    String dateString = "2020-01-01T00:00:00.0+04:00";
    DateTimeType fhirValue = new DateTimeType(dateString);
    parameterDefinition.addExtension(CDMConstants.PARAMETER_DEFAULT_URL, fhirValue);
    assertEquals(new DatetimeParameter(dateString), R4ParameterDefinitionWithDefaultToCohortParameterConverter.toCohortParameter(parameterDefinition));
}