Examples with Use org.hl7.fhir.r4.model.ExplanationOfBenefit.Use used on opensource projects

Example 76 with Use

use of org.hl7.fhir.r4.model.ExplanationOfBenefit.Use in project quality-measure-and-cohort-service by Alvearie.

the class CohortEngineRestHandler method evaluateMeasure.

@POST
@Path("/evaluation")
@Consumes(MediaType.MULTIPART_FORM_DATA)
@Produces({ MediaType.APPLICATION_JSON })
@ApiOperation(value = "Evaluates a measure bundle for a single patient", notes = EVALUATION_API_NOTES, response = String.class, tags = { "Measure Evaluation" }, nickname = "evaluate_measure", extensions = { @Extension(properties = { @ExtensionProperty(name = DarkFeatureSwaggerFilter.DARK_FEATURE_NAME, value = CohortEngineRestConstants.DARK_LAUNCHED_MEASURE_EVALUATION) }) })
@ApiImplicitParams({ // This is necessary for the dark launch feature
@ApiImplicitParam(access = DarkFeatureSwaggerFilter.DARK_FEATURE_CONTROLLED, paramType = "header", dataType = "string"), // These are necessary to create a proper view of the request body that is all wrapped up in the Liberty IMultipartBody parameter
@ApiImplicitParam(name = REQUEST_DATA_PART, value = EXAMPLE_REQUEST_DATA_JSON, dataTypeClass = MeasureEvaluation.class, required = true, paramType = "form", type = "file"), @ApiImplicitParam(name = MEASURE_PART, value = EXAMPLE_MEASURE_ZIP, dataTypeClass = File.class, required = true, paramType = "form", type = "file") })
@ApiResponses(value = { @ApiResponse(code = 200, message = "Successful Operation: This API returns the JSON representation of a FHIR MeasureReport. A full example can be found at https://www.hl7.org/fhir/measurereport-cms146-cat1-example.html"), @ApiResponse(code = 400, message = "Bad Request", response = ServiceErrorList.class), @ApiResponse(code = 500, message = "Server Error", response = ServiceErrorList.class) })
public Response evaluateMeasure(@Context HttpServletRequest request, @ApiParam(value = ServiceBaseConstants.MINOR_VERSION_DESCRIPTION, required = true, defaultValue = ServiceBuildConstants.DATE) @QueryParam(CohortEngineRestHandler.VERSION) String version, @ApiParam(hidden = true, type = "file", required = true) IMultipartBody multipartBody) {
    final String methodName = MethodNames.EVALUATE_MEASURE.getName();
    Response response = null;
    // Error out if feature is not enabled
    ServiceBaseUtility.isDarkFeatureEnabled(CohortEngineRestConstants.DARK_LAUNCHED_MEASURE_EVALUATION);
    try {
        // Perform api setup
        Response errorResponse = ServiceBaseUtility.apiSetup(version, logger, methodName);
        if (errorResponse != null) {
            return errorResponse;
        }
        if (multipartBody == null) {
            throw new IllegalArgumentException("A multipart/form-data body is required");
        }
        IAttachment metadataAttachment = multipartBody.getAttachment(REQUEST_DATA_PART);
        if (metadataAttachment == null) {
            throw new IllegalArgumentException(String.format("Missing '%s' MIME attachment", REQUEST_DATA_PART));
        }
        IAttachment measureAttachment = multipartBody.getAttachment(MEASURE_PART);
        if (measureAttachment == null) {
            throw new IllegalArgumentException(String.format("Missing '%s' MIME attachment", MEASURE_PART));
        }
        // deserialize the MeasuresEvaluation request
        ObjectMapper om = new ObjectMapper();
        MeasureEvaluation evaluationRequest = om.readValue(metadataAttachment.getDataHandler().getInputStream(), MeasureEvaluation.class);
        // validate the contents of the evaluationRequest
        validateBean(evaluationRequest);
        FhirContext fhirContext = FhirContext.forR4();
        try (InputStream is = measureAttachment.getDataHandler().getInputStream();
            RetrieveCacheContext retrieveCacheContext = new DefaultRetrieveCacheContext()) {
            MeasureEvaluator evaluator = createMeasureEvaluator(is, evaluationRequest.getDataServerConfig(), evaluationRequest.getTerminologyServerConfig(), evaluationRequest.isExpandValueSets(), evaluationRequest.getSearchPageSize(), retrieveCacheContext, fhirContext);
            MeasureReport report = evaluator.evaluatePatientMeasure(evaluationRequest.getPatientId(), evaluationRequest.getMeasureContext(), evaluationRequest.getEvidenceOptions());
            // The default serializer gets into an infinite loop when trying to serialize MeasureReport, so we use the
            // HAPI encoder instead.
            IParser parser = fhirContext.newJsonParser();
            ResponseBuilder responseBuilder = Response.status(Response.Status.OK).header("Content-Type", "application/json").entity(parser.encodeResourceToString(report));
            response = responseBuilder.build();
        }
    } catch (Throwable e) {
        // map any exceptions caught into the proper REST error response objects
        response = new CohortServiceExceptionMapper().toResponse(e);
    } finally {
        // Perform api cleanup
        Response errorResponse = ServiceBaseUtility.apiCleanup(logger, methodName);
        if (errorResponse != null) {
            response = errorResponse;
        }
    }
    return response;
}

Example 77 with Use

use of org.hl7.fhir.r4.model.ExplanationOfBenefit.Use in project quality-measure-and-cohort-service by Alvearie.

the class R4RestFhirTerminologyProvider method lookup.

/**
 * This is a small patch to the OSS implementation to use named-parameter lookup on
 * the operation response instead of just assuming a positional location.
 */
@Override
public Code lookup(Code code, CodeSystemInfo codeSystem) throws ResourceNotFoundException {
    Parameters respParam = fhirClient.operation().onType(CodeSystem.class).named("lookup").withParameter(Parameters.class, "code", new CodeType(code.getCode())).andParameter("system", new UriType(codeSystem.getId())).execute();
    StringType display = (StringType) respParam.getParameter("display");
    if (display != null) {
        code.withDisplay(display.getValue());
    }
    return code.withSystem(codeSystem.getId());
}

Example 78 with Use

use of org.hl7.fhir.r4.model.ExplanationOfBenefit.Use in project elexis-server by elexis.

the class PatientTest method searchPatientMultipleNameValue.

@Test
@Ignore("unclear use case, deactivated")
public void searchPatientMultipleNameValue() {
    Bundle results = client.search().forResource(Patient.class).where(Patient.NAME.matches().value("Test")).and(Patient.NAME.matches().value("name")).returnBundle(Bundle.class).execute();
    assertEquals(2, results.getEntry().size());
    Optional<BundleEntryComponent> found = results.getEntry().stream().filter(e -> e.getResource().getId().contains("s9b71824bf6b877701111")).findFirst();
    assertTrue(found.isPresent());
}

Example 79 with Use

use of org.hl7.fhir.r4.model.ExplanationOfBenefit.Use in project openmrs-module-fhir2 by openmrs.

the class ObservationFhirResourceProviderIntegrationTest method shouldSupportMultiplePagesAsJson.

@Test
public void shouldSupportMultiplePagesAsJson() throws Exception {
    MockHttpServletResponse response = get("/Observation?subject.name=Chebaskwony&_sort=-date").accept(FhirMediaTypes.JSON).go();
    assertThat(response, isOk());
    assertThat(response.getContentType(), is(FhirMediaTypes.JSON.toString()));
    assertThat(response.getContentAsString(), notNullValue());
    Bundle results = readBundleResponse(response);
    assertThat(results, notNullValue());
    assertThat(results.getType(), equalTo(Bundle.BundleType.SEARCHSET));
    assertThat(results.hasEntry(), is(true));
    List<Observation> observations = results.getEntry().stream().map(Bundle.BundleEntryComponent::getResource).filter(it -> it instanceof Observation).map(it -> (Observation) it).collect(Collectors.toList());
    Bundle.BundleLinkComponent link = results.getLink("next");
    while (link != null) {
        String nextUrl = link.getUrl();
        URL url = new URL(nextUrl);
        // NB Because we cannot use the *full* URL, we use the relevant portion, which in this case, is just the query
        // string
        response = get("?" + url.getQuery()).accept(FhirMediaTypes.JSON).go();
        assertThat(response, isOk());
        assertThat(response.getContentType(), is(FhirMediaTypes.JSON.toString()));
        assertThat(response.getContentAsString(), notNullValue());
        results = readBundleResponse(response);
        assertThat(results, notNullValue());
        assertThat(results.getType(), equalTo(Bundle.BundleType.SEARCHSET));
        assertThat(results.hasEntry(), is(true));
        observations.addAll(results.getEntry().stream().map(Bundle.BundleEntryComponent::getResource).filter(it -> it instanceof Observation).map(it -> (Observation) it).collect(Collectors.toList()));
        link = results.getLink("next");
    }
    assertThat(observations, hasSize(equalTo(results.getTotal())));
    for (int i = 1; i < observations.size(); i++) {
        assertThat(observations.get(i - 1).getEffectiveDateTimeType().getValue(), sameOrAfter(observations.get(i).getEffectiveDateTimeType().getValue()));
    }
}

Example 80 with Use

use of org.hl7.fhir.r4.model.ExplanationOfBenefit.Use in project openmrs-module-fhir2 by openmrs.

the class ObservationFhirResourceProviderIntegrationTest method shouldSupportMultiplePagesAsJson.

@Test
public void shouldSupportMultiplePagesAsJson() throws Exception {
    MockHttpServletResponse response = get("/Observation?subject.name=Chebaskwony&_sort=-date").accept(FhirMediaTypes.JSON).go();
    assertThat(response, isOk());
    assertThat(response.getContentType(), is(FhirMediaTypes.JSON.toString()));
    assertThat(response.getContentAsString(), notNullValue());
    Bundle results = readBundleResponse(response);
    assertThat(results, notNullValue());
    assertThat(results.getType(), equalTo(Bundle.BundleType.SEARCHSET));
    assertThat(results.hasEntry(), is(true));
    List<Observation> observations = results.getEntry().stream().map(Bundle.BundleEntryComponent::getResource).filter(it -> it instanceof Observation).map(it -> (Observation) it).collect(Collectors.toList());
    Bundle.BundleLinkComponent link = results.getLink("next");
    while (link != null) {
        String nextUrl = link.getUrl();
        URL url = new URL(nextUrl);
        // NB Because we cannot use the *full* URL, we use the relevant portion, which in this case, is just the query
        // string
        response = get("?" + url.getQuery()).accept(FhirMediaTypes.JSON).go();
        assertThat(response, isOk());
        assertThat(response.getContentType(), is(FhirMediaTypes.JSON.toString()));
        assertThat(response.getContentAsString(), notNullValue());
        results = readBundleResponse(response);
        assertThat(results, notNullValue());
        assertThat(results.getType(), equalTo(Bundle.BundleType.SEARCHSET));
        assertThat(results.hasEntry(), is(true));
        observations.addAll(results.getEntry().stream().map(Bundle.BundleEntryComponent::getResource).filter(it -> it instanceof Observation).map(it -> (Observation) it).collect(Collectors.toList()));
        link = results.getLink("next");
    }
    assertThat(observations, hasSize(equalTo(results.getTotal())));
    for (int i = 1; i < observations.size(); i++) {
        assertThat(observations.get(i - 1).getEffectiveDateTimeType().getValue(), sameOrAfter(observations.get(i).getEffectiveDateTimeType().getValue()));
    }
}