use of org.hl7.fhir.r4.model.Parameters in project cqf-ruler by DBCG.
the class CareGapsProviderIT method testSubjectReferenceInvalid.
@SuppressWarnings("java:S5778")
@Test
public void testSubjectReferenceInvalid() throws Exception {
Parameters params = new Parameters();
params.addParameter().setName("periodStart").setValue(new StringType(periodStartValid));
params.addParameter().setName("periodEnd").setValue(new StringType(periodEndValid));
params.addParameter().setName("subject").setValue(new StringType(subjectReferenceInvalid));
params.addParameter().setName("status").setValue(new StringType(statusValid));
params.addParameter().setName("measureId").setValue(new StringType(measureIdValid));
assertThrows(InternalErrorException.class, () -> {
getClient().operation().onType(Measure.class).named("$care-gaps").withParameters(params).useHttpGet().returnResourceType(Parameters.class).execute();
});
}
use of org.hl7.fhir.r4.model.Parameters in project cqf-ruler by DBCG.
the class CareGapsProviderIT method testOrganizationOnly.
@Test
public void testOrganizationOnly() throws Exception {
Parameters params = new Parameters();
params.addParameter().setName("periodStart").setValue(new StringType(periodStartValid));
params.addParameter().setName("periodEnd").setValue(new StringType(periodEndValid));
params.addParameter().setName("status").setValue(new StringType(statusValid));
params.addParameter().setName("measureId").setValue(new StringType(measureIdValid));
params.addParameter().setName("organization").setValue(new StringType(organizationValid));
assertThrows(InternalErrorException.class, () -> {
getClient().operation().onType(Measure.class).named("$care-gaps").withParameters(params).useHttpGet().returnResourceType(Parameters.class).execute();
});
// TODO: implement organization
// assertDoesNotThrow(() -> {
// getClient().operation().onType(Measure.class).named("$care-gaps")
// .withParameters(params)
// .useHttpGet()
// .returnResourceType(Parameters.class)
// .execute();
// });
}
use of org.hl7.fhir.r4.model.Parameters in project cqf-ruler by DBCG.
the class MeasureEvaluateProvider method evaluateMeasure.
/**
* Implements the <a href=
* "https://www.hl7.org/fhir/operation-measure-evaluate-measure.html">$evaluate-measure</a>
* operation found in the
* <a href="http://www.hl7.org/fhir/clinicalreasoning-module.html">FHIR Clinical
* Reasoning Module</a>. This implementation aims to be compatible with the CQF
* IG.
*
* @param requestDetails The details (such as tenant) of this request. Usually
* auto-populated HAPI.
* @param theId the Id of the Measure to evaluate
* @param periodStart The start of the reporting period
* @param periodEnd The end of the reporting period
* @param reportType The type of MeasureReport to generate
* @param subject the subject to use for the evaluation
* @param practitioner the practitioner to use for the evaluation
* @param lastReceivedOn the date the results of this measure were last
* received.
* @param productLine the productLine (e.g. Medicare, Medicaid, etc) to use
* for the evaluation. This is a non-standard parameter.
* @param additionalData the data bundle containing additional data
* @return the calculated MeasureReport
*/
// warning for greater than 7 parameters
@SuppressWarnings("squid:S00107")
@Description(shortDefinition = "$evaluate-measure", value = "Implements the <a href=\"https://www.hl7.org/fhir/operation-measure-evaluate-measure.html\">$evaluate-measure</a> operation found in the <a href=\"http://www.hl7.org/fhir/clinicalreasoning-module.html\">FHIR Clinical Reasoning Module</a>. This implementation aims to be compatible with the CQF IG.", example = "Measure/example/$evaluate-measure?subject=Patient/123&periodStart=2019&periodEnd=2020")
@Operation(name = "$evaluate-measure", idempotent = true, type = Measure.class)
public MeasureReport evaluateMeasure(RequestDetails requestDetails, @IdParam IdType theId, @OperationParam(name = "periodStart") String periodStart, @OperationParam(name = "periodEnd") String periodEnd, @OperationParam(name = "reportType") String reportType, @OperationParam(name = "subject") String subject, @OperationParam(name = "practitioner") String practitioner, @OperationParam(name = "lastReceivedOn") String lastReceivedOn, @OperationParam(name = "productLine") String productLine, @OperationParam(name = "additionalData") Bundle additionalData) {
Measure measure = read(theId);
TerminologyProvider terminologyProvider = this.jpaTerminologyProviderFactory.create(requestDetails);
DataProvider dataProvider = this.jpaDataProviderFactory.create(requestDetails, terminologyProvider);
LibraryContentProvider libraryContentProvider = this.libraryContentProviderFactory.create(requestDetails);
FhirDal fhirDal = this.fhirDalFactory.create(requestDetails);
org.opencds.cqf.cql.evaluator.measure.r4.R4MeasureProcessor measureProcessor = new org.opencds.cqf.cql.evaluator.measure.r4.R4MeasureProcessor(null, this.dataProviderFactory, null, null, null, terminologyProvider, libraryContentProvider, dataProvider, fhirDal, null, this.globalLibraryCache);
MeasureReport report = measureProcessor.evaluateMeasure(measure.getUrl(), periodStart, periodEnd, reportType, subject, null, lastReceivedOn, null, null, null, additionalData);
if (productLine != null) {
Extension ext = new Extension();
ext.setUrl("http://hl7.org/fhir/us/cqframework/cqfmeasures/StructureDefinition/cqfm-productLine");
ext.setValue(new StringType(productLine));
report.addExtension(ext);
}
return report;
}
use of org.hl7.fhir.r4.model.Parameters in project cqf-ruler by DBCG.
the class Session method resolveActions.
private void resolveActions(List<PlanDefinition.PlanDefinitionActionComponent> actions, Context context, String patientId, RequestGroupBuilder requestGroupBuilder, List<RequestGroup.RequestGroupActionComponent> actionComponents, RequestDetails theRequest) {
for (PlanDefinition.PlanDefinitionActionComponent action : actions) {
boolean conditionsMet = true;
for (PlanDefinition.PlanDefinitionActionConditionComponent condition : action.getCondition()) {
if (condition.getKind() == PlanDefinition.ActionConditionKind.APPLICABILITY) {
if (!condition.hasExpression()) {
continue;
}
if (condition.hasExpression() && !condition.getExpression().hasExpression()) {
continue;
}
Object result = context.resolveExpressionRef(condition.getExpression().getExpression()).getExpression().evaluate(context);
if (!(result instanceof Boolean)) {
continue;
}
if (!(Boolean) result) {
conditionsMet = false;
}
}
if (conditionsMet) {
RequestGroupActionBuilder actionBuilder = new RequestGroupActionBuilder();
if (action.hasTitle()) {
actionBuilder.buildTitle(action.getTitle());
}
if (action.hasDescription()) {
actionBuilder.buildDescripition(action.getDescription());
}
// source
if (action.hasDocumentation()) {
RelatedArtifact artifact = action.getDocumentationFirstRep();
RelatedArtifactBuilder artifactBuilder = new RelatedArtifactBuilder();
if (artifact.hasDisplay()) {
artifactBuilder.buildDisplay(artifact.getDisplay());
}
if (artifact.hasUrl()) {
artifactBuilder.buildUrl(artifact.getUrl());
}
if (artifact.hasDocument() && artifact.getDocument().hasUrl()) {
AttachmentBuilder attachmentBuilder = new AttachmentBuilder();
attachmentBuilder.buildUrl(artifact.getDocument().getUrl());
artifactBuilder.buildDocument(attachmentBuilder.build());
}
actionBuilder.buildDocumentation(Collections.singletonList(artifactBuilder.build()));
}
// TODO - uuid
if (action.hasPrefix()) {
actionBuilder.buildPrefix(action.getPrefix());
}
if (action.hasType()) {
actionBuilder.buildType(action.getType());
}
if (action.hasDefinition()) {
if (action.getDefinitionCanonicalType().getValue().contains("ActivityDefinition")) {
ActivityDefinition activityDefinition = this.activityDefinitionDao.read(new IdType("ActivityDefinition", action.getDefinitionCanonicalType().getId()));
if (activityDefinition.hasDescription()) {
actionBuilder.buildDescripition(activityDefinition.getDescription());
}
try {
this.activityDefinitionApplyProvider.apply(theRequest, new IdType(action.getDefinitionCanonicalType().getId()), patientId, null, null, null, null, null, null, null, null).setId(UUID.randomUUID().toString());
} catch (FHIRException e) {
throw new RuntimeException("Error applying ActivityDefinition " + e.getMessage());
}
Parameters inParams = new Parameters();
inParams.addParameter().setName("patient").setValue(new StringType(patientId));
Parameters outParams = this.fhirContext.newRestfulGenericClient(theRequest.getFhirServerBase()).operation().onInstance(new IdDt("ActivityDefinition", action.getDefinition().getId())).named("$apply").withParameters(inParams).useHttpGet().execute();
List<Parameters.ParametersParameterComponent> response = outParams.getParameter();
Resource resource = response.get(0).getResource().setId(UUID.randomUUID().toString());
actionBuilder.buildResourceTarget(resource);
actionBuilder.buildResource(new ReferenceBuilder().buildReference(resource.getId()).build());
}
}
// on here...
if (action.hasDynamicValue()) {
for (PlanDefinition.PlanDefinitionActionDynamicValueComponent dynamicValue : action.getDynamicValue()) {
if (dynamicValue.hasPath() && dynamicValue.hasExpression()) {
if (dynamicValue.getPath().endsWith("title")) {
// summary
String title = (String) context.resolveExpressionRef(dynamicValue.getExpression().getExpression()).evaluate(context);
actionBuilder.buildTitle(title);
} else if (dynamicValue.getPath().endsWith("description")) {
// detail
String description = (String) context.resolveExpressionRef(dynamicValue.getExpression().getExpression()).evaluate(context);
actionBuilder.buildDescripition(description);
} else if (dynamicValue.getPath().endsWith("extension")) {
// indicator
String extension = (String) context.resolveExpressionRef(dynamicValue.getExpression().getExpression()).evaluate(context);
actionBuilder.buildExtension(extension);
}
}
}
}
if (!actionBuilder.build().isEmpty()) {
actionComponents.add(actionBuilder.build());
}
if (action.hasAction()) {
resolveActions(action.getAction(), context, patientId, requestGroupBuilder, actionComponents, theRequest);
}
}
}
}
requestGroupBuilder.buildAction(new ArrayList<>(actionComponents));
}
use of org.hl7.fhir.r4.model.Parameters in project cqf-ruler by DBCG.
the class DataOperationsProvider method dataRequirements.
@Operation(name = "$data-requirements", idempotent = true, type = Measure.class)
public Library dataRequirements(@IdParam IdType theId, @OperationParam(name = "startPeriod") String startPeriod, @OperationParam(name = "endPeriod") String endPeriod, RequestDetails theRequestDetails) throws InternalErrorException, FHIRException {
Measure measure = read(theId, theRequestDetails);
Library library = getLibraryFromMeasure(measure, theRequestDetails);
if (library == null) {
throw new RuntimeException("Could not load measure library.");
}
// TODO: Pass startPeriod and endPeriod as parameters to the data requirements operation
return processDataRequirements(measure, library, theRequestDetails);
}
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