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Example 6 with PrimitiveType

use of org.hl7.fhir.r4.model.PrimitiveType in project kindling by HL7.

the class JsonSpecGenerator method generateCoreElem.

@SuppressWarnings("rawtypes")
private void generateCoreElem(List<ElementDefinition> elements, ElementDefinition elem, int indent, String pathName, boolean asValue, TypeRefComponent type, boolean last, boolean complex) throws Exception {
    if (elem.getPath().endsWith(".id"))
        return;
    if (!complex && elem.getPath().endsWith(".extension"))
        return;
    if (elem.getMax().equals("0"))
        return;
    String indentS = "";
    for (int i = 0; i < indent; i++) {
        indentS += "  ";
    }
    write(indentS);
    List<ElementDefinition> children = getChildren(elements, elem);
    String name = tail(elem.getPath());
    String en = asValue ? "value[x]" : name;
    String tc = type.getWorkingCode();
    if (en.contains("[x]"))
        en = en.replace("[x]", upFirst(tc));
    boolean unbounded = elem.hasMax() && elem.getMax().equals("*");
    // 1. name
    write("\"<a href=\"" + (defPage + "#" + pathName + "." + en) + "\" title=\"" + Utilities.escapeXml(getEnhancedDefinition(elem)) + "\" class=\"dict\"><span style=\"text-decoration: underline\">" + en + "</span></a>\" : ");
    // 2. value
    boolean delayedCloseArray = false;
    if (unbounded)
        write("[");
    if (type == null) {
        // inline definition
        assert (children.size() > 0);
        write("{");
        delayedCloseArray = true;
    } else if (definitions.getPrimitives().containsKey(tc)) {
        if (!(tc.equals("integer") || tc.equals("boolean") || tc.equals("decimal")))
            write("\"");
        if (elem.hasFixed())
            write(Utilities.escapeJson(((PrimitiveType) elem.getFixed()).asStringValue()));
        else
            write("&lt;<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(tc) + ".html#" + tc) + "\">" + tc + "</a></span>&gt;");
        if (!(tc.equals("integer") || tc.equals("boolean") || tc.equals("decimal")))
            write("\"");
    } else {
        write("{ ");
        write("<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(tc) + ".html#" + tc) + "\">" + tc + "</a></span>");
        if (type.hasProfile()) {
            if (type.getProfile().get(0).getValue().startsWith("http://hl7.org/fhir/StructureDefinition/")) {
                String t = type.getProfile().get(0).getValue().substring(40);
                if (definitions.hasType(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(t) + ".html#" + t) + "\">" + t + "</a></span>)");
                else if (definitions.hasResource(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + dtRoot + t.toLowerCase() + ".html\">" + t + "</a></span>)");
                else
                    write("(" + t + ")");
            } else
                write("(" + type.getProfile() + ")");
        }
        if (type.hasTargetProfile()) {
            if (type.getTargetProfile().get(0).getValue().startsWith("http://hl7.org/fhir/StructureDefinition/")) {
                String t = type.getTargetProfile().get(0).getValue().substring(40);
                if (definitions.hasType(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + (dtRoot + definitions.getSrcFile(t) + ".html#" + t) + "\">" + t + "</a></span>)");
                else if (definitions.hasResource(t))
                    write("(<span style=\"color: darkgreen\"><a href=\"" + prefix + dtRoot + t.toLowerCase() + ".html\">" + t + "</a></span>)");
                else
                    write("(" + t + ")");
            } else
                write("(" + type.getTargetProfile() + ")");
        }
        write(" }");
    }
    if (!delayedCloseArray) {
        if (unbounded)
            write("]");
        if (!last)
            write(",");
    }
    write(" <span style=\"color: Gray\">//</span>");
    // 3. optionality
    writeCardinality(elem);
    // 4. doco
    if (!elem.hasFixed()) {
        if (elem.hasBinding() && elem.getBinding().hasValueSet()) {
            ValueSet vs = resolveValueSet(elem.getBinding().getValueSet());
            if (vs != null)
                write("<span style=\"color: navy; opacity: 0.8\"><a href=\"" + (Utilities.isAbsoluteUrl(vs.getUserString("path")) ? "" : prefix) + vs.getUserData("path") + "\" style=\"color: navy\">" + Utilities.escapeXml(elem.getShort()) + "</a></span>");
            else
                write("<span style=\"color: navy; opacity: 0.8\"><a href=\"" + elem.getBinding().getValueSet() + ".html\" style=\"color: navy\">" + Utilities.escapeXml(elem.getShort()) + "</a></span>");
        } else
            write("<span style=\"color: navy; opacity: 0.8\">" + Utilities.escapeXml(elem.getShort()) + "</span>");
    }
    write("\r\n");
    if (delayedCloseArray) {
        int c = 0;
        for (ElementDefinition child : children) {
            if (child.getType().size() == 1)
                generateCoreElem(elements, child, indent + 1, pathName + "." + name, false, child.getType().get(0), ++c == children.size(), false);
            else {
                write("<span style=\"color: Gray\">// value[x]: <span style=\"color: navy; opacity: 0.8\">" + Utilities.escapeXml(child.getShort()) + "</span>. One of these " + Integer.toString(child.getType().size()) + ":</span>\r\n");
                for (TypeRefComponent t : child.getType()) generateCoreElem(elements, child, indent + 1, pathName + "." + name, false, t, ++c == children.size(), false);
            }
        }
        write("}]");
        if (!last)
            write(",");
    }
}
Also used : TypeRefComponent(org.hl7.fhir.r5.model.ElementDefinition.TypeRefComponent) PrimitiveType(org.hl7.fhir.r5.model.PrimitiveType) ElementDefinition(org.hl7.fhir.r5.model.ElementDefinition) ValueSet(org.hl7.fhir.r5.model.ValueSet)

Example 7 with PrimitiveType

use of org.hl7.fhir.r4.model.PrimitiveType in project kindling by HL7.

the class ProfileGenerator method genUml.

private void genUml(TypeDefn t) {
    if (!uml.hasClass(t.getName())) {
        UMLClass c = new UMLClass(t.getName(), UMLClassType.Class);
        uml.getTypes().put(t.getName(), c);
    }
    UMLClass c = uml.getClassByName(t.getName());
    c.setDocumentation(t.getDefinition());
    if (!t.getTypes().isEmpty()) {
        c.setSpecialises(uml.getClassByName(t.typeCodeNoParams()));
    }
    if (!c.hasAttributes()) {
        for (ElementDefn e : t.getElements()) {
            UMLAttribute a = null;
            if (t.getTypes().isEmpty()) {
                a = new UMLAttribute(e.getName(), Integer.toString(e.getMinCardinality()), Integer.toString(e.getMaxCardinality()), uml.getClassByNameCreate("Base"));
            } else if (t.getTypes().size() == 1 && !isReference(t.getTypes().get(0).getName())) {
                a = new UMLAttribute(e.getName(), Integer.toString(e.getMinCardinality()), Integer.toString(e.getMaxCardinality()), uml.getClassByNameCreate(e.typeCode()));
            } else {
                String tn = t.getTypes().get(0).getName();
                boolean allSame = true;
                for (int i = 1; i < t.getTypes().size(); i++) {
                    allSame = tn.equals(t.getTypes().get(i).getName());
                }
                if (allSame && isReference(tn)) {
                    a = new UMLAttribute(e.getName(), Integer.toString(e.getMinCardinality()), Integer.toString(e.getMaxCardinality()), uml.getClassByNameCreate(tn));
                    for (TypeRef tr : t.getTypes()) {
                        for (String p : tr.getParams()) {
                            a.getTargets().add(p);
                        }
                    }
                } else {
                    boolean allPrimitive = true;
                    for (TypeRef tr : t.getTypes()) {
                        if (!definitions.hasPrimitiveType(tr.getName())) {
                            allPrimitive = false;
                        }
                    }
                    if (allPrimitive) {
                        a = new UMLAttribute(e.getName(), Integer.toString(e.getMinCardinality()), Integer.toString(e.getMaxCardinality()), uml.getClassByNameCreate("PrimitiveType"));
                    } else {
                        a = new UMLAttribute(e.getName(), Integer.toString(e.getMinCardinality()), Integer.toString(e.getMaxCardinality()), uml.getClassByNameCreate("DataType"));
                    }
                    for (TypeRef tr : t.getTypes()) {
                        a.getTypes().add(tr.getName());
                        for (String p : tr.getParams()) {
                            a.getTargets().add(p);
                        }
                    }
                }
            }
            c.getAttributes().add(a);
        }
    }
}
Also used : UMLClass(org.hl7.fhir.definitions.uml.UMLClass) UMLAttribute(org.hl7.fhir.definitions.uml.UMLAttribute) TypeRef(org.hl7.fhir.definitions.model.TypeRef) ElementDefn(org.hl7.fhir.definitions.model.ElementDefn)

Example 8 with PrimitiveType

use of org.hl7.fhir.r4.model.PrimitiveType in project kindling by HL7.

the class ProfileGenerator method addSpecificDetails.

private void addSpecificDetails(PrimitiveType type, ElementDefinition ed) throws FHIRFormatError {
    if (type.getCode().equals("integer")) {
        ed.setMinValue(new IntegerType(-2147483648));
        ed.setMaxValue(new IntegerType(2147483647));
    }
    if (type.getCode().equals("integer64")) {
        ed.setMinValue(new Integer64Type(-9223372036854775808L));
        ed.setMaxValue(new Integer64Type(9223372036854775807L));
    }
    if (type.getCode().equals("string")) {
        ed.setMaxLength(1024 * 1024);
    }
}
Also used : IntegerType(org.hl7.fhir.r5.model.IntegerType) Integer64Type(org.hl7.fhir.r5.model.Integer64Type)

Example 9 with PrimitiveType

use of org.hl7.fhir.r4.model.PrimitiveType in project kindling by HL7.

the class DictHTMLGenerator method encodeValue.

private String encodeValue(DataType value) throws Exception {
    if (value == null || value.isEmpty())
        return null;
    if (value instanceof PrimitiveType)
        return Utilities.escapeXml(((PrimitiveType) value).asStringValue());
    ByteArrayOutputStream bs = new ByteArrayOutputStream();
    XmlParser parser = new XmlParser();
    parser.setOutputStyle(OutputStyle.PRETTY);
    parser.compose(bs, null, value);
    String[] lines = bs.toString().split("\\r?\\n");
    StringBuilder b = new StringBuilder();
    for (String s : lines) {
        if (!Utilities.noString(s) && !s.startsWith("<?")) {
            // eliminate the xml header
            b.append(Utilities.escapeXml(s).replace(" ", "&nbsp;") + "<br/>");
        }
    }
    return b.toString();
}
Also used : XmlParser(org.hl7.fhir.r5.formats.XmlParser) CommaSeparatedStringBuilder(org.hl7.fhir.utilities.CommaSeparatedStringBuilder) PrimitiveType(org.hl7.fhir.r5.model.PrimitiveType) ByteArrayOutputStream(java.io.ByteArrayOutputStream)

Example 10 with PrimitiveType

use of org.hl7.fhir.r4.model.PrimitiveType in project kindling by HL7.

the class FhirTurtleGenerator method genPrimitiveType.

/* ==============================================
     Generators for various FHIR types
   * ============================================== */
/**
 * PrimitiveType Generator
 *
 * @param pt FHIR Primitive Type (e.g. int, string, dateTime)
 */
// Note: For unknown reasons, getPrimitives returns DefinedCodes, not PrimitiveTypes...
private void genPrimitiveType(DefinedCode pt) {
    String ptName = pt.getCode();
    FHIRResource ptRes = fact.fhir_class(ptName, "Primitive").addDefinition(pt.getDefinition());
    Resource rdfType = RDFTypeMap.xsd_type_for(ptName, owlTarget);
    if (rdfType != null)
        ptRes.restriction(fact.fhir_cardinality_restriction(value, fact.fhir_datatype(rdfType).resource, 1, 1));
}
Also used : FHIRResource(org.hl7.fhir.rdf.FHIRResource) Resource(org.apache.jena.rdf.model.Resource) FHIRResource(org.hl7.fhir.rdf.FHIRResource)

Aggregations

FHIRException (org.hl7.fhir.exceptions.FHIRException)18 EqualsBuilder (org.apache.commons.lang3.builder.EqualsBuilder)12 IPrimitiveType (org.hl7.fhir.instance.model.api.IPrimitiveType)12 IOException (java.io.IOException)10 NotImplementedException (org.apache.commons.lang3.NotImplementedException)10 ParameterizedTest (org.junit.jupiter.params.ParameterizedTest)9 MethodSource (org.junit.jupiter.params.provider.MethodSource)9 PrimitiveType (org.hl7.fhir.r5.model.PrimitiveType)8 CommaSeparatedStringBuilder (org.hl7.fhir.utilities.CommaSeparatedStringBuilder)8 URISyntaxException (java.net.URISyntaxException)6 PrimitiveType (org.hl7.fhir.definitions.model.PrimitiveType)6 FileNotFoundException (java.io.FileNotFoundException)5 ArrayList (java.util.ArrayList)5 PrimitiveType (org.hl7.fhir.dstu3.model.PrimitiveType)5 PrimitiveType (org.hl7.fhir.r4b.model.PrimitiveType)5 XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)5 URI (java.net.URI)4 ElementDefn (org.hl7.fhir.definitions.model.ElementDefn)4 StringType (org.hl7.fhir.dstu3.model.StringType)4 ParserConfigurationException (javax.xml.parsers.ParserConfigurationException)3