Examples with ValueSet org.hl7.fhir.r4.model.ValueSet used on opensource projects

Example 61 with ValueSet

use of org.hl7.fhir.r4.model.ValueSet in project cqf-ruler by DBCG.

the class CacheValueSetsProviderIT method testCacheValueSetsEndpointNull.

@Test
public void testCacheValueSetsEndpointNull() throws Exception {
    StringAndListParam stringAndListParam = getStringAndListParamFromValueSet("valueset/AcuteInpatient.json");
    RequestDetails details = Mockito.mock(RequestDetails.class);
    Resource outcomeResource = cacheValueSetsProvider.cacheValuesets(details, new Endpoint().getIdElement(), stringAndListParam, null, null);
    validateOutcome(outcomeResource, "Could not find Endpoint/null");
}

Example 62 with ValueSet

use of org.hl7.fhir.r4.model.ValueSet in project cqf-ruler by DBCG.

the class CacheValueSetsProviderIT method testCacheValueSetsAlreadyExpanded.

// Get help with this....
// @Test
// public void testCacheValueSetsExpandAndAddConcepts() throws Exception {
// Endpoint endpoint = uploadLocalServerEndpoint();
// RequestDetails details = Mockito.mock(RequestDetails.class);
// ValueSet vs = uploadValueSet("valueset/valueset-buprenorphine-and-methadone-medications.json");
// vs.getCompose().getInclude().forEach(include -> {
// assertTrue(!include.hasConcept());
// });
// StringAndListParam stringAndListParam = getStringAndListParamFromValueSet(vs);
// IGenericClient localClient = createClient(ourCtx, endpoint);
// // localClient.operation().onServer().named("updateCodeSystems").withNoParameters(Parameters.class).execute();
// Resource outcomeResource = cacheValueSetsProvider.cacheValuesets(details, endpoint.getIdElement(), stringAndListParam, null, null);
// assertTrue(outcomeResource instanceof Bundle);
// Bundle resultBundle = (Bundle) outcomeResource;
// assertTrue(resultBundle.getEntry().size() == 1);
// BundleEntryComponent entry = resultBundle.getEntry().get(0);
// assertTrue(entry.getResponse().getLocation().startsWith("ValueSet/" + vs.getIdElement().getIdPart()));
// assertTrue(entry.getResponse().getStatus().equals("200 OK"));
// ValueSet resultingValueSet = localClient.read().resource(ValueSet.class).withId(vs.getIdElement()).execute();
// resultingValueSet.getCompose().getInclude().forEach(include -> {
// assertTrue(include.hasConcept());
// });
// }
@Test
public void testCacheValueSetsAlreadyExpanded() throws Exception {
    Endpoint endpoint = uploadLocalServerEndpoint();
    RequestDetails details = Mockito.mock(RequestDetails.class);
    ValueSet vs = uploadValueSet("valueset/valueset-benzodiazepine-medications.json");
    StringAndListParam stringAndListParam = getStringAndListParamFromValueSet(vs);
    Resource outcomeResource = cacheValueSetsProvider.cacheValuesets(details, endpoint.getIdElement(), stringAndListParam, null, null);
    assertTrue(outcomeResource instanceof Bundle);
    Bundle resultBundle = (Bundle) outcomeResource;
    assertEquals(1, resultBundle.getEntry().size());
    BundleEntryComponent entry = resultBundle.getEntry().get(0);
    assertTrue(entry.getResponse().getLocation().startsWith("ValueSet/" + vs.getIdElement().getIdPart()));
    assertEquals("200 OK", entry.getResponse().getStatus());
}

Example 63 with ValueSet

use of org.hl7.fhir.r4.model.ValueSet in project cqf-ruler by DBCG.

the class CodeSystemProviderIT method testR4ICD10PerformCodeSystemUpdateByList.

@Test
@Order(4)
public void testR4ICD10PerformCodeSystemUpdateByList() throws IOException {
    log.info("Beginning Test R4 SNOMED CodeSystemUpdate");
    BufferedReader reader = new BufferedReader(new InputStreamReader(CodeSystemProviderIT.class.getResourceAsStream("valueset" + "/" + "valueset-pdmp-review-procedure.json")));
    String resourceString = reader.lines().collect(Collectors.joining(System.lineSeparator()));
    reader.close();
    ValueSet vs = (ValueSet) loadResource("json", resourceString);
    assertEquals(0, performCodeSystemSearchByUrl(snomedSctUrl).size());
    codeSystemUpdateProvider.performCodeSystemUpdate(Arrays.asList(vs));
    OperationOutcome outcome = codeSystemUpdateProvider.updateCodeSystems(vs.getIdElement());
    for (OperationOutcomeIssueComponent issue : outcome.getIssue()) {
        assertEquals(OperationOutcome.IssueSeverity.INFORMATION, issue.getSeverity());
        assertTrue(issue.getDetails().getText().startsWith("Successfully updated the following CodeSystems: "));
        assertTrue(issue.getDetails().getText().contains("sct"));
    }
    assertEquals(1, performCodeSystemSearchByUrl(snomedSctUrl).size());
    log.info("Finished Test R4 SNOMED CodeSystemUpdate");
}

Example 64 with ValueSet

use of org.hl7.fhir.r4.model.ValueSet in project cqf-ruler by DBCG.

the class CodeSystemProviderIT method testR4RxNormCodeSystemUpdateById.

@Test
@Order(3)
public void testR4RxNormCodeSystemUpdateById() throws IOException {
    log.info("Beginning Test R4 LOINC CodeSystemUpdate");
    ValueSet vs = (ValueSet) loadResource("org/opencds/cqf/ruler/devtools/r4/valueset/valueset-pain-treatment-plan.json");
    assertEquals(0, performCodeSystemSearchByUrl(loincUrl).size());
    OperationOutcome outcome = codeSystemUpdateProvider.updateCodeSystems(vs.getIdElement());
    for (OperationOutcomeIssueComponent issue : outcome.getIssue()) {
        assertEquals(OperationOutcome.IssueSeverity.INFORMATION, issue.getSeverity());
        assertTrue(issue.getDetails().getText().startsWith("Successfully updated the following CodeSystems: "));
        assertTrue(issue.getDetails().getText().contains("loinc"));
    }
    assertEquals(1, performCodeSystemSearchByUrl(loincUrl).size());
    log.info("Finished Test R4 LOINC CodeSystemUpdate");
}

Example 65 with ValueSet

use of org.hl7.fhir.r4.model.ValueSet in project cqf-ruler by DBCG.

the class CodeSystemProviderIT method testCodeSystemUpdateValueSetDNE.

@Test
@Order(1)
public void testCodeSystemUpdateValueSetDNE() throws IOException {
    ValueSet vs = (ValueSet) readResource("org/opencds/cqf/ruler/devtools/r4/valueset/valueset-pain-treatment-plan.json");
    OperationOutcome outcome = codeSystemUpdateProvider.updateCodeSystems(vs.getIdElement());
    assertEquals(1, outcome.getIssue().size());
    OperationOutcomeIssueComponent issue = outcome.getIssue().get(0);
    assertEquals(OperationOutcome.IssueSeverity.ERROR, issue.getSeverity());
    assertTrue(issue.getDetails().getText().startsWith("Unable to find Resource: " + vs.getIdElement().getIdPart()));
}