use of org.hl7.fhir.r4.model.codesystems.ResourceTypes.ENCOUNTER in project hl7v2-fhir-converter by LinuxForHealth.
the class Hl7EncounterFHIRConversionTest method testEncounterReferencesObservationAndDiagnosis.
/**
* Testing Encounter correctly references Observation AND Diagnosis when both are present.
*/
@Test
void testEncounterReferencesObservationAndDiagnosis() throws IOException {
String hl7message = "MSH|^~\\&|hl7Integration|hl7Integration|||||ADT^A01|||2.6|\n" + "PID|||1234^^^^MR||DOE^JANE^|||F|||||||||||||||||||||\n" + "PV1|1|O|Location||||||||||||||||261938_6_201306171546|||||||||||||||||||||||||20130617134644|||||||||\n" + "OBX|1|SN|24467-3^CD3+CD4+ (T4 helper) cells [#/volume] in Blood^LN||=^440|{Cells}/uL^cells per microliter^UCUM|649-1346 cells/mcL|L|||F\r" + "DG1|1|ICD10|^Ovarian Cancer|||||||||||||||||||||\r";
String json = ftv.convert(hl7message, OPTIONS);
IBaseResource bundleResource = context.getParser().parseResource(json);
assertThat(bundleResource).isNotNull();
Bundle b = (Bundle) bundleResource;
List<BundleEntryComponent> e = b.getEntry();
List<Resource> obsResource = ResourceUtils.getResourceList(e, ResourceType.Observation);
assertThat(obsResource).hasSize(1);
List<Resource> encounterResource = ResourceUtils.getResourceList(e, ResourceType.Encounter);
assertThat(encounterResource).hasSize(1);
Encounter enc = (Encounter) encounterResource.get(0);
List<Reference> reasonRefs = enc.getReasonReference();
assertEquals(2, reasonRefs.size());
// Guess at the order of the references
Reference refObservation = reasonRefs.get(0);
Reference refCondition = reasonRefs.get(1);
// If guessed wrong, reverse them
if (!refObservation.getReference().contains("Observation")) {
refObservation = reasonRefs.get(1);
refCondition = reasonRefs.get(0);
}
assertTrue(refObservation.getReference().contains("Observation"));
assertTrue(refCondition.getReference().contains("Condition"));
}
use of org.hl7.fhir.r4.model.codesystems.ResourceTypes.ENCOUNTER in project hl7v2-fhir-converter by LinuxForHealth.
the class Hl7EncounterFHIRConversionTest method test_encounter_PV2_serviceProvider_idfix.
@Test
void test_encounter_PV2_serviceProvider_idfix() {
String hl7message = "MSH|^~\\&|WHI_LOAD_GENERATOR|IBM_TORONTO_LAB||IBM|20210330144208|8078780|ADT^A01|MSGID_4e1c575f-6c6d-47b2-ab9f-829f20c96db2|T|2.3\n" + "EVN||20210330144208||ADT_EVENT|007|20210309140700\n" + "PID|1||0a8a1752-e336-43e1-bf7f-0c8f6f437ca3^^^MRN||Patient^Load^Generator||19690720|M|Patient^Alias^Generator|AA|9999^^CITY^STATE^ZIP^CAN|COUNTY|(866)845-0900||ENGLISH^ENGLISH|SIN|NONE|Account_0a8a1752-e336-43e1-bf7f-0c8f6f437ca3|123-456-7890|||N|BIRTH PLACE|N||||||N\n" + "PV1||I|^^^Toronto^^5642 Hilly Av||||2905^Doctor^Attending^M^IV^^M.D|5755^Doctor^Referring^^Sr|770542^Doctor^Consulting^Jr||||||||59367^Doctor^Admitting||Visit_0a3be81e-144b-4885-9b4e-c5cd33c8f038|||||||||||||||||||||||||20210407191342\n" + "PV2||TEL||||X-5546||20210330144208|20210309||||||||||||n|N|South Shore Hosptial Weymouth^SSHW^^^^^^SSH*WEYMOUTH WEST_BUILD-7.F|||||||||N||||||\n";
String json = ftv.convert(hl7message, OPTIONS);
assertThat(json).isNotBlank();
LOGGER.debug("FHIR json result:\n" + json);
IBaseResource bundleResource = context.getParser().parseResource(json);
assertThat(bundleResource).isNotNull();
Bundle b = (Bundle) bundleResource;
List<BundleEntryComponent> e = b.getEntry();
List<Resource> encounterResource = ResourceUtils.getResourceList(e, ResourceType.Encounter);
assertThat(encounterResource).hasSize(1);
Encounter encounter = ResourceUtils.getResourceEncounter(encounterResource.get(0), context);
Reference serviceProvider = encounter.getServiceProvider();
assertThat(serviceProvider).isNotNull();
String providerString = serviceProvider.getReference();
assertThat(providerString).isEqualTo("Organization/ssh-weymouth-west-build-7.f");
List<Resource> organizations = ResourceUtils.getResourceList(e, ResourceType.Organization);
assertThat(organizations).hasSize(1);
Organization orgResource = ResourceUtils.getResourceOrganization(organizations.get(0), context);
assertThat(orgResource.getId()).isEqualTo(providerString);
assertThat(orgResource.getName()).isEqualTo("South Shore Hosptial Weymouth");
assertThat(orgResource.getIdentifier()).hasSize(1);
// PV2.23.1
assertThat(orgResource.getIdentifierFirstRep().getValue()).hasToString("SSH*WEYMOUTH WEST_BUILD-7.F");
// Because ID is name based
assertThat(orgResource.getIdentifierFirstRep().getSystem()).hasToString("urn:id:extID");
}
use of org.hl7.fhir.r4.model.codesystems.ResourceTypes.ENCOUNTER in project hl7v2-fhir-converter by LinuxForHealth.
the class Hl7EncounterFHIRConversionTest method test_encounter_modeOfarrival_invalid_with_system.
@Test
void test_encounter_modeOfarrival_invalid_with_system() {
String hl7message = "MSH|^~\\&|WHI_LOAD_GENERATOR|IBM_TORONTO_LAB||IBM|20210330144208|8078780|ADT^A01|MSGID_4e1c575f-6c6d-47b2-ab9f-829f20c96db2|T|2.3\n" + "EVN||20210330144208||ADT_EVENT|007|20210309140700\n" + "PID|1||0a8a1752-e336-43e1-bf7f-0c8f6f437ca3^^^MRN||Patient^Load^Generator||19690720|M|Patient^Alias^Generator|AA|9999^^CITY^STATE^ZIP^CAN|COUNTY|(866)845-0900||ENGLISH^ENGLISH|SIN|NONE|Account_0a8a1752-e336-43e1-bf7f-0c8f6f437ca3|123-456-7890|||N|BIRTH PLACE|N||||||N\n" + "PV1||I|^^^Toronto^^5642 Hilly Av||||2905^Doctor^Attending^M^IV^^M.D|5755^Doctor^Referring^^Sr|770542^Doctor^Consulting^Jr||||||||59367^Doctor^Admitting||Visit_0a3be81e-144b-4885-9b4e-c5cd33c8f038|||||||||||||||||||||||||20210407191342\n" + "PV2||TEL||||X-5546||20210330144208|20210309||||||||||||n|N|South Shore Hosptial Weymouth^SSHW^^^^^^SSH-WEYMOUTH|||||||||N||||||AMB^AMBULATORY^FUNKY\n";
Encounter encounter = ResourceUtils.getEncounter(ftv, hl7message);
List<Extension> extensionList = encounter.getExtension();
assertNotNull(extensionList);
assertThat(extensionList).isNotEmpty();
boolean extFound = false;
for (Extension ext : extensionList) {
if (ext.getUrl().equals("http://hl7.org/fhir/StructureDefinition/encounter-modeOfArrival")) {
extFound = true;
assertTrue(ext.getValue() instanceof Coding);
Coding valueCoding = (Coding) ext.getValue();
assertThat(valueCoding.getCode()).isEqualTo("AMB");
assertThat(valueCoding.getDisplay()).isEqualTo("AMBULATORY");
assertThat(valueCoding.getSystem()).isEqualTo("urn:id:FUNKY");
break;
}
}
assertTrue(extFound, "modeOfArrival extension not found");
}
use of org.hl7.fhir.r4.model.codesystems.ResourceTypes.ENCOUNTER in project hl7v2-fhir-converter by LinuxForHealth.
the class Hl7EncounterFHIRConversionTest method test_encounter_class.
@Test
void test_encounter_class() {
// PV1.2 has mapped value and should returned fhir value
String hl7message = "MSH|^~\\&|PROSOLV|SENTARA|WHIA|IBM|20151008111200|S1|ADT^A01^ADT_A01|MSGID000001|T|2.6|10092|PRPA008|AL|AL|100|8859/1|ENGLISH|ARM|ARM5007\n" + "EVN|A04|20151008111200|20171013152901|O|OID1006|20171013153621|EVN1009\n" + "PID|||1234^^^^MR||DOE^JANE^|||F||||||||||||||||||||||\n" + "PV1|1|E|SAN JOSE|A|10089|MILPITAS|2740^Torres^Callie|2913^Grey^Meredith^F|3065^Sloan^Mark^J|CAR|FOSTER CITY|AD|R|1|A4|VI|9052^Shepeard^Derek^|AH|10019181|FIC1002|IC|CC|CR|CO|20161012034052|60000|6|AC|GHBR|20160926054052|AC5678|45000|15000|D|20161016154413|DCD|SAN FRANCISCO|VEG|RE|O|AV|FREMONT|CALIFORNIA|20161013154626|20161014154634|10000|14000|2000|4000|POL8009|V|PHY6007\n";
Encounter encounter = ResourceUtils.getEncounter(ftv, hl7message);
assertThat(encounter.hasClass_()).isTrue();
Coding encounterClass = encounter.getClass_();
assertThat(encounterClass.getCode()).isEqualTo("EMER");
assertThat(encounterClass.getSystem()).isEqualTo("http://terminology.hl7.org/CodeSystem/v3-ActCode");
assertThat(encounterClass.getDisplay()).isEqualTo("emergency");
assertThat(encounterClass.getVersion()).isNull();
// Should return hl7Code if not a mapped value
hl7message = "MSH|^~\\&|PROSOLV|SENTARA|WHIA|IBM|20151008111200|S1|ADT^A01^ADT_A01|MSGID000001|T|2.6|10092|PRPA008|AL|AL|100|8859/1|ENGLISH|ARM|ARM5007\n" + "EVN|A04|20151008111200|20171013152901|O|OID1006|20171013153621|EVN1009\n" + "PID|||1234^^^^MR||DOE^JANE^|||F||||||||||||||||||||||\n" + "PV1|1|L|SAN JOSE|A|10089|MILPITAS|2740^Torres^Callie|2913^Grey^Meredith^F|3065^Sloan^Mark^J|CAR|FOSTER CITY|AD|R|1|A4|VI|9052^Shepeard^Derek^|AH|10019181|FIC1002|IC|CC|CR|CO|20161012034052|60000|6|AC|GHBR|20160926054052|AC5678|45000|15000|D|20161016154413|DCD|SAN FRANCISCO|VEG|RE|O|AV|FREMONT|CALIFORNIA|20161013154626|20161014154634|10000|14000|2000|4000|POL8009|V|PHY6007\n";
encounter = ResourceUtils.getEncounter(ftv, hl7message);
assertThat(encounter.hasClass_()).isTrue();
encounterClass = encounter.getClass_();
assertThat(encounterClass.getCode()).isEqualTo("L");
assertThat(encounterClass.getSystem()).isNull();
assertThat(encounterClass.getDisplay()).isNull();
assertThat(encounterClass.getVersion()).isNull();
}
use of org.hl7.fhir.r4.model.codesystems.ResourceTypes.ENCOUNTER in project hl7v2-fhir-converter by LinuxForHealth.
the class Hl7EncounterFHIRConversionTest method test_encounter_modeOfarrival_invalid_singlevalue.
@Test
void test_encounter_modeOfarrival_invalid_singlevalue() {
String hl7message = "MSH|^~\\&|WHI_LOAD_GENERATOR|IBM_TORONTO_LAB||IBM|20210330144208|8078780|ADT^A01|MSGID_4e1c575f-6c6d-47b2-ab9f-829f20c96db2|T|2.3\n" + "EVN||20210330144208||ADT_EVENT|007|20210309140700\n" + "PID|1||0a8a1752-e336-43e1-bf7f-0c8f6f437ca3^^^MRN||Patient^Load^Generator||19690720|M|Patient^Alias^Generator|AA|9999^^CITY^STATE^ZIP^CAN|COUNTY|(866)845-0900||ENGLISH^ENGLISH|SIN|NONE|Account_0a8a1752-e336-43e1-bf7f-0c8f6f437ca3|123-456-7890|||N|BIRTH PLACE|N||||||N\n" + "PV1||I|^^^Toronto^^5642 Hilly Av||||2905^Doctor^Attending^M^IV^^M.D|5755^Doctor^Referring^^Sr|770542^Doctor^Consulting^Jr||||||||59367^Doctor^Admitting||Visit_0a3be81e-144b-4885-9b4e-c5cd33c8f038|||||||||||||||||||||||||20210407191342\n" + "PV2||TEL||||X-5546||20210330144208|20210309||||||||||||n|N|South Shore Hosptial Weymouth^SSHW^^^^^^SSH-WEYMOUTH|||||||||N||||||AMBULATORY\n";
Encounter encounter = ResourceUtils.getEncounter(ftv, hl7message);
List<Extension> extensionList = encounter.getExtension();
assertNotNull(extensionList);
assertThat(extensionList).isNotEmpty();
boolean extFound = false;
for (Extension ext : extensionList) {
if (ext.getUrl().equals("http://hl7.org/fhir/StructureDefinition/encounter-modeOfArrival")) {
extFound = true;
assertTrue(ext.getValue() instanceof Coding);
Coding valueCoding = (Coding) ext.getValue();
assertThat(valueCoding.getCode()).isEqualTo("AMBULATORY");
assertThat(valueCoding.getDisplay()).isNull();
assertThat(valueCoding.getSystem()).isNull();
break;
}
}
assertTrue(extFound, "modeOfArrival extension not found");
}
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