Examples with ConceptMapGroupComponent org.hl7.fhir.r4b.model.ConceptMap.ConceptMapGroupComponent used on opensource projects

Example 51 with ConceptMapGroupComponent

use of org.hl7.fhir.r4b.model.ConceptMap.ConceptMapGroupComponent in project org.hl7.fhir.core by hapifhir.

the class StructureMapUtilities method produceConceptMap.

private static void produceConceptMap(StringBuilder b, ConceptMap cm) {
    b.append("conceptmap \"");
    b.append(cm.getId());
    b.append("\" {\r\n");
    Map<String, String> prefixesSrc = new HashMap<String, String>();
    Map<String, String> prefixesTgt = new HashMap<String, String>();
    char prefix = 's';
    for (ConceptMapGroupComponent cg : cm.getGroup()) {
        if (!prefixesSrc.containsKey(cg.getSource())) {
            prefixesSrc.put(cg.getSource(), String.valueOf(prefix));
            b.append("  prefix ");
            b.append(prefix);
            b.append(" = \"");
            b.append(cg.getSource());
            b.append("\"\r\n");
            prefix++;
        }
        if (!prefixesTgt.containsKey(cg.getTarget())) {
            prefixesTgt.put(cg.getTarget(), String.valueOf(prefix));
            b.append("  prefix ");
            b.append(prefix);
            b.append(" = \"");
            b.append(cg.getTarget());
            b.append("\"\r\n");
            prefix++;
        }
    }
    b.append("\r\n");
    for (ConceptMapGroupComponent cg : cm.getGroup()) {
        if (cg.hasUnmapped()) {
            b.append("  unmapped for ");
            b.append(prefixesSrc.get(cg.getSource()));
            b.append(" = ");
            b.append(cg.getUnmapped().getMode().toCode());
            b.append("\r\n");
        }
    }
    for (ConceptMapGroupComponent cg : cm.getGroup()) {
        for (SourceElementComponent ce : cg.getElement()) {
            b.append("  ");
            b.append(prefixesSrc.get(cg.getSource()));
            b.append(":");
            if (Utilities.isToken(ce.getCode())) {
                b.append(ce.getCode());
            } else {
                b.append("\"");
                b.append(ce.getCode());
                b.append("\"");
            }
            b.append(" ");
            b.append(getChar(ce.getTargetFirstRep().getEquivalence()));
            b.append(" ");
            b.append(prefixesTgt.get(cg.getTarget()));
            b.append(":");
            if (Utilities.isToken(ce.getTargetFirstRep().getCode())) {
                b.append(ce.getTargetFirstRep().getCode());
            } else {
                b.append("\"");
                b.append(ce.getTargetFirstRep().getCode());
                b.append("\"");
            }
            b.append("\r\n");
        }
    }
    b.append("}\r\n\r\n");
}

Example 52 with ConceptMapGroupComponent

use of org.hl7.fhir.r4b.model.ConceptMap.ConceptMapGroupComponent in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerator method generate.

public boolean generate(ResourceContext rcontext, ConceptMap cm) throws FHIRFormatError, DefinitionException, IOException {
    XhtmlNode x = new XhtmlNode(NodeType.Element, "div");
    x.h2().addText(cm.getName() + " (" + cm.getUrl() + ")");
    XhtmlNode p = x.para();
    p.tx("Mapping from ");
    if (cm.hasSource())
        AddVsRef(rcontext, cm.getSource().primitiveValue(), p);
    else
        p.tx("(not specified)");
    p.tx(" to ");
    if (cm.hasTarget())
        AddVsRef(rcontext, cm.getTarget().primitiveValue(), p);
    else
        p.tx("(not specified)");
    p = x.para();
    if (cm.getExperimental())
        p.addText(Utilities.capitalize(cm.getStatus().toString()) + " (not intended for production usage). ");
    else
        p.addText(Utilities.capitalize(cm.getStatus().toString()) + ". ");
    p.tx("Published on " + (cm.hasDate() ? cm.getDateElement().toHumanDisplay() : "??") + " by " + cm.getPublisher());
    if (!cm.getContact().isEmpty()) {
        p.tx(" (");
        boolean firsti = true;
        for (ContactDetail ci : cm.getContact()) {
            if (firsti)
                firsti = false;
            else
                p.tx(", ");
            if (ci.hasName())
                p.addText(ci.getName() + ": ");
            boolean first = true;
            for (ContactPoint c : ci.getTelecom()) {
                if (first)
                    first = false;
                else
                    p.tx(", ");
                addTelecom(p, c);
            }
        }
        p.tx(")");
    }
    p.tx(". ");
    p.addText(cm.getCopyright());
    if (!Utilities.noString(cm.getDescription()))
        addMarkdown(x, cm.getDescription());
    x.br();
    CodeSystem cs = context.fetchCodeSystem("http://hl7.org/fhir/concept-map-equivalence");
    String eqpath = cs.getUserString("path");
    for (ConceptMapGroupComponent grp : cm.getGroup()) {
        String src = grp.getSource();
        boolean comment = false;
        boolean ok = true;
        Map<String, HashSet<String>> sources = new HashMap<String, HashSet<String>>();
        Map<String, HashSet<String>> targets = new HashMap<String, HashSet<String>>();
        sources.put("code", new HashSet<String>());
        targets.put("code", new HashSet<String>());
        SourceElementComponent cc = grp.getElement().get(0);
        String dst = grp.getTarget();
        sources.get("code").add(grp.getSource());
        targets.get("code").add(grp.getTarget());
        for (SourceElementComponent ccl : grp.getElement()) {
            ok = ok && ccl.getTarget().size() == 1 && ccl.getTarget().get(0).getDependsOn().isEmpty() && ccl.getTarget().get(0).getProduct().isEmpty();
            for (TargetElementComponent ccm : ccl.getTarget()) {
                comment = comment || !Utilities.noString(ccm.getComment());
                for (OtherElementComponent d : ccm.getDependsOn()) {
                    if (!sources.containsKey(d.getProperty()))
                        sources.put(d.getProperty(), new HashSet<String>());
                    sources.get(d.getProperty()).add(d.getSystem());
                }
                for (OtherElementComponent d : ccm.getProduct()) {
                    if (!targets.containsKey(d.getProperty()))
                        targets.put(d.getProperty(), new HashSet<String>());
                    targets.get(d.getProperty()).add(d.getSystem());
                }
            }
        }
        String display;
        if (ok) {
            // simple
            XhtmlNode tbl = x.table("grid");
            XhtmlNode tr = tbl.tr();
            tr.td().b().tx("Source Code");
            tr.td().b().tx("Equivalence");
            tr.td().b().tx("Destination Code");
            if (comment)
                tr.td().b().tx("Comment");
            for (SourceElementComponent ccl : grp.getElement()) {
                tr = tbl.tr();
                XhtmlNode td = tr.td();
                td.addText(ccl.getCode());
                display = getDisplayForConcept(grp.getSource(), ccl.getCode());
                if (display != null && !isSameCodeAndDisplay(ccl.getCode(), display))
                    td.tx(" (" + display + ")");
                TargetElementComponent ccm = ccl.getTarget().get(0);
                tr.td().addText(!ccm.hasEquivalence() ? "" : ccm.getEquivalence().toCode());
                td = tr.td();
                td.addText(ccm.getCode());
                display = getDisplayForConcept(grp.getTarget(), ccm.getCode());
                if (display != null && !isSameCodeAndDisplay(ccm.getCode(), display))
                    td.tx(" (" + display + ")");
                if (comment)
                    tr.td().addText(ccm.getComment());
            }
        } else {
            XhtmlNode tbl = x.table("grid");
            XhtmlNode tr = tbl.tr();
            XhtmlNode td;
            tr.td().colspan(Integer.toString(sources.size())).b().tx("Source Concept Details");
            tr.td().b().tx("Equivalence");
            tr.td().colspan(Integer.toString(targets.size())).b().tx("Destination Concept Details");
            if (comment)
                tr.td().b().tx("Comment");
            tr = tbl.tr();
            if (sources.get("code").size() == 1) {
                String url = sources.get("code").iterator().next();
                renderCSDetailsLink(tr, url);
            } else
                tr.td().b().tx("Code");
            for (String s : sources.keySet()) {
                if (!s.equals("code")) {
                    if (sources.get(s).size() == 1) {
                        String url = sources.get(s).iterator().next();
                        renderCSDetailsLink(tr, url);
                    } else
                        tr.td().b().addText(getDescForConcept(s));
                }
            }
            tr.td();
            if (targets.get("code").size() == 1) {
                String url = targets.get("code").iterator().next();
                renderCSDetailsLink(tr, url);
            } else
                tr.td().b().tx("Code");
            for (String s : targets.keySet()) {
                if (!s.equals("code")) {
                    if (targets.get(s).size() == 1) {
                        String url = targets.get(s).iterator().next();
                        renderCSDetailsLink(tr, url);
                    } else
                        tr.td().b().addText(getDescForConcept(s));
                }
            }
            if (comment)
                tr.td();
            for (int si = 0; si < grp.getElement().size(); si++) {
                SourceElementComponent ccl = grp.getElement().get(si);
                boolean slast = si == grp.getElement().size() - 1;
                boolean first = true;
                for (int ti = 0; ti < ccl.getTarget().size(); ti++) {
                    TargetElementComponent ccm = ccl.getTarget().get(ti);
                    boolean last = ti == ccl.getTarget().size() - 1;
                    tr = tbl.tr();
                    td = tr.td();
                    if (!first && !last)
                        td.setAttribute("style", "border-top-style: none; border-bottom-style: none");
                    else if (!first)
                        td.setAttribute("style", "border-top-style: none");
                    else if (!last)
                        td.setAttribute("style", "border-bottom-style: none");
                    if (first) {
                        if (sources.get("code").size() == 1)
                            td.addText(ccl.getCode());
                        else
                            td.addText(grp.getSource() + " / " + ccl.getCode());
                        display = getDisplayForConcept(grp.getSource(), ccl.getCode());
                        if (display != null)
                            td.tx(" (" + display + ")");
                    }
                    for (String s : sources.keySet()) {
                        if (!s.equals("code")) {
                            td = tr.td();
                            if (first) {
                                td.addText(getValue(ccm.getDependsOn(), s, sources.get(s).size() != 1));
                                display = getDisplay(ccm.getDependsOn(), s);
                                if (display != null)
                                    td.tx(" (" + display + ")");
                            }
                        }
                    }
                    first = false;
                    if (!ccm.hasEquivalence())
                        tr.td().tx(":" + "(" + ConceptMapEquivalence.EQUIVALENT.toCode() + ")");
                    else
                        tr.td().ah(eqpath + "#" + ccm.getEquivalence().toCode()).tx(ccm.getEquivalence().toCode());
                    td = tr.td();
                    if (targets.get("code").size() == 1)
                        td.addText(ccm.getCode());
                    else
                        td.addText(grp.getTarget() + " / " + ccm.getCode());
                    display = getDisplayForConcept(grp.getTarget(), ccm.getCode());
                    if (display != null)
                        td.tx(" (" + display + ")");
                    for (String s : targets.keySet()) {
                        if (!s.equals("code")) {
                            td = tr.td();
                            td.addText(getValue(ccm.getProduct(), s, targets.get(s).size() != 1));
                            display = getDisplay(ccm.getProduct(), s);
                            if (display != null)
                                td.tx(" (" + display + ")");
                        }
                    }
                    if (comment)
                        tr.td().addText(ccm.getComment());
                }
            }
        }
    }
    inject(cm, x, NarrativeStatus.GENERATED);
    return true;
}

Example 53 with ConceptMapGroupComponent

use of org.hl7.fhir.r4b.model.ConceptMap.ConceptMapGroupComponent in project org.hl7.fhir.core by hapifhir.

the class StructureMapUtilities method getGroup.

private ConceptMapGroupComponent getGroup(ConceptMap map, String srcs, String tgts) {
    for (ConceptMapGroupComponent grp : map.getGroup()) {
        if (grp.getSource().equals(srcs))
            if (!grp.hasTarget() || tgts == null || tgts.equals(grp.getTarget())) {
                if (!grp.hasTarget() && tgts != null)
                    grp.setTarget(tgts);
                return grp;
            }
    }
    ConceptMapGroupComponent grp = map.addGroup();
    grp.setSource(srcs);
    grp.setTarget(tgts);
    return grp;
}

Example 54 with ConceptMapGroupComponent

use of org.hl7.fhir.r4b.model.ConceptMap.ConceptMapGroupComponent in project org.hl7.fhir.core by hapifhir.

the class StructureMapUtilities method getGroup.

private ConceptMapGroupComponent getGroup(ConceptMap map, String srcs, String tgts) {
    for (ConceptMapGroupComponent grp : map.getGroup()) {
        if (grp.getSource().equals(srcs))
            if (!grp.hasTarget() || tgts == null || tgts.equals(grp.getTarget())) {
                if (!grp.hasTarget() && tgts != null)
                    grp.setTarget(tgts);
                return grp;
            }
    }
    ConceptMapGroupComponent grp = map.addGroup();
    grp.setSource(srcs);
    grp.setTarget(tgts);
    return grp;
}