Examples with ElementDefinition org.hl7.fhir.r4b.model.ElementDefinition used on opensource projects

Example 76 with ElementDefinition

use of org.hl7.fhir.r4b.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilitiesTests method testSlicingTask8742.

private void testSlicingTask8742() throws EOperationOutcome, Exception {
    StructureDefinition focus = new StructureDefinition();
    StructureDefinition base = context.fetchResource(StructureDefinition.class, "http://hl7.org/fhir/StructureDefinition/Organization").copy();
    focus.setUrl(Utilities.makeUuidUrn());
    focus.setBase(base.getUrl());
    ElementDefinition id = focus.getDifferential().addElement();
    id.setPath("Organization.address");
    id.setMin(1);
    id.setMax("1");
    id.setMustSupport(true);
    id = focus.getDifferential().addElement();
    id.setPath("Organization.address.extension");
    id.setName("USLabCountycodes");
    id.getSlicing().setOrdered(false).setRules(SlicingRules.OPEN).addDiscriminator("url");
    id.setShort("County/Parish FIPS codes");
    id.setDefinition("County/Parish FIPS codes.");
    id.setRequirements("County/Parish Code SHALL use FIPS 6-4  ( INCITS 31:2009).");
    id.setMin(0);
    id.setMax("1");
    id.addType().setCode("Extension").addProfile("http://hl7.org/fhir/StructureDefinition/us-core-county");
    id.setMustSupport(true);
    id.getBinding().setStrength(BindingStrength.REQUIRED).setDescription("FIPS codes for US counties and county equivalent entities.").setValueSet(new Reference().setReference("http://hl7.org/fhir/ValueSet/fips-county"));
    List<ValidationMessage> messages = new ArrayList<ValidationMessage>();
    new ProfileUtilities(context, messages, null).generateSnapshot(base, focus, focus.getUrl(), "Simple Test");
    // 14 for address with one sliced extension
    boolean ok = base.getSnapshot().getElement().size() == focus.getSnapshot().getElement().size() - 13;
    if (!ok) {
        compareXml(base, focus);
        throw new FHIRException("Snap shot generation test 8742 failed");
    } else
        System.out.println("Snap shot generation test 8742 passed");
}

Example 77 with ElementDefinition

use of org.hl7.fhir.r4b.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilitiesTests method textTypeNarrowing2.

/**
 * check that narrowing types is working
 * this one renames the path
 *
 * @param context2
 * @
 * @throws EOperationOutcome
 */
private void textTypeNarrowing2() throws EOperationOutcome, Exception {
    StructureDefinition focus = new StructureDefinition();
    StructureDefinition base = context.fetchResource(StructureDefinition.class, "http://hl7.org/fhir/StructureDefinition/Patient").copy();
    focus.setUrl(Utilities.makeUuidUrn());
    focus.setBase(base.getUrl());
    ElementDefinition id = focus.getDifferential().addElement();
    id.setPath("Patient.deceasedDateTime");
    id.addType().setCode("dateTime");
    List<ValidationMessage> messages = new ArrayList<ValidationMessage>();
    new ProfileUtilities(context, messages, null).generateSnapshot(base, focus, focus.getUrl(), "Simple Test");
    boolean ok = base.getSnapshot().getElement().size() == focus.getSnapshot().getElement().size();
    for (int i = 0; i < base.getSnapshot().getElement().size(); i++) {
        if (ok) {
            ElementDefinition b = base.getSnapshot().getElement().get(i);
            ElementDefinition f = focus.getSnapshot().getElement().get(i);
            if (!f.hasBase() || !b.getPath().equals(f.getBase().getPath()))
                ok = false;
            else {
                f.setBase(null);
                if (f.getPath().equals("Patient.deceasedDateTime")) {
                    ok = f.getType().size() == 1 && f.getType().get(0).getCode().equals("dateTime");
                    if (ok) {
                        f.getType().clear();
                        b.getType().clear();
                        f.setPath(b.getPath());
                    }
                }
                ok = ok && Base.compareDeep(b, f, true);
            }
        }
    }
    if (!ok) {
        compareXml(base, focus);
        throw new FHIRException("Snap shot generation narrow type 2 failed");
    } else
        System.out.println("Snap shot generation narrow type 2 test passed");
}

Example 78 with ElementDefinition

use of org.hl7.fhir.r4b.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilitiesTests method testTypeWalk.

/**
 * Walking into a type
 *
 * @param context2
 * @
 * @throws EOperationOutcome
 */
private void testTypeWalk() throws EOperationOutcome, Exception {
    StructureDefinition focus = new StructureDefinition();
    StructureDefinition base = context.fetchResource(StructureDefinition.class, "http://hl7.org/fhir/StructureDefinition/Patient").copy();
    focus.setUrl(Utilities.makeUuidUrn());
    focus.setBase(base.getUrl());
    ElementDefinition id = focus.getDifferential().addElement();
    id.setPath("Patient.identifier");
    id.setMustSupport(true);
    id = focus.getDifferential().addElement();
    id.setPath("Patient.identifier.system");
    id.setMustSupport(true);
    List<ValidationMessage> messages = new ArrayList<ValidationMessage>();
    new ProfileUtilities(context, messages, null).generateSnapshot(base, focus, focus.getUrl(), "Simple Test");
    // the derived should be 8 longer
    boolean ok = base.getSnapshot().getElement().size() == focus.getSnapshot().getElement().size() - 8;
    for (int i = 0; i < base.getSnapshot().getElement().size(); i++) {
        if (ok) {
            ElementDefinition b = base.getSnapshot().getElement().get(i);
            ElementDefinition f = focus.getSnapshot().getElement().get(i <= 9 ? i : i + 8);
            if (!f.hasBase() || !b.getPath().equals(f.getBase().getPath()))
                ok = false;
            else {
                f.setBase(null);
                if (f.getPath().equals("Patient.identifier")) {
                    ok = f.getMustSupport() && !b.getMustSupport();
                    if (ok) {
                        f.setMustSupportElement(null);
                    }
                }
                ok = Base.compareDeep(b, f, true);
            }
        }
    }
    if (!ok) {
        compareXml(base, focus);
        throw new FHIRException("Snap shot generation simple test failed");
    } else
        System.out.println("Snap shot generation simple test passed");
}

Example 79 with ElementDefinition

use of org.hl7.fhir.r4b.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilitiesTests method testSlicingExtensionComplex.

/**
 * we're going to slice Patient.extension and refer to extension by profile. one of the extensions is complex, and we're going to walk into
 * it and make it must support
 *
 * implicit: whether to rely on implicit extension slicing
 */
private void testSlicingExtensionComplex(boolean implicit) throws EOperationOutcome, Exception {
    StructureDefinition focus = new StructureDefinition();
    StructureDefinition base = context.fetchResource(StructureDefinition.class, "http://hl7.org/fhir/StructureDefinition/Patient").copy();
    focus.setUrl(Utilities.makeUuidUrn());
    focus.setBase(base.getUrl());
    // set the slice up
    ElementDefinition id;
    if (!implicit) {
        id = focus.getDifferential().addElement();
        id.setPath("Patient.extension");
        id.getSlicing().setOrdered(false).setRules(SlicingRules.OPEN).addDiscriminator("url");
    }
    // first slice  - a simple one to get us going:
    id = focus.getDifferential().addElement();
    id.setPath("Patient.extension");
    id.setName("simple");
    id.addType().setCode("Extension").addProfile("http://hl7.org/fhir/StructureDefinition/patient-birthTime");
    // second slice - the complex one
    // we walk into this and fix properties on the inner extensions
    id = focus.getDifferential().addElement();
    id.setPath("Patient.extension");
    id.setName("complex");
    id.addType().setCode("Extension").addProfile("http://hl7.org/fhir/StructureDefinition/patient-nationality");
    if (!implicit) {
        id = focus.getDifferential().addElement();
        id.setPath("Patient.extension.extension");
        id.getSlicing().setOrdered(false).setRules(SlicingRules.OPEN).addDiscriminator("url");
    }
    id = focus.getDifferential().addElement();
    id.setPath("Patient.extension.extension");
    id.setName("code");
    id.setMustSupport(true);
    id.addType().setCode("Extension").addProfile("http://hl7.org/fhir/StructureDefinition/patient-nationality#code");
    id = focus.getDifferential().addElement();
    id.setPath("Patient.extension.extension");
    id.setName("period");
    id.addType().setCode("Extension").addProfile("http://hl7.org/fhir/StructureDefinition/patient-nationality#period");
    // prohibit this one....
    id.setMax("0");
    List<ValidationMessage> messages = new ArrayList<ValidationMessage>();
    new ProfileUtilities(context, messages, null).generateSnapshot(base, focus, focus.getUrl(), "Simple Test");
    // ok, there's going to 1 (simple) + complex: 1 + id + extnesion.slice + extension.code + (4 inside from that) + extension.period + (4 inside from that) + value + url = 16
    boolean ok = base.getSnapshot().getElement().size() == focus.getSnapshot().getElement().size() - 16;
    // custom checks
    ok = ok && rule(focus.getSnapshot().getElement().get(7).getPath().equals("Patient.extension"), "element 7 (base) path");
    ok = ok && rule(focus.getSnapshot().getElement().get(7).hasSlicing(), "element 7 slicing");
    ok = ok && rule(focus.getSnapshot().getElement().get(8).getPath().equals("Patient.extension"), "element 8 (1st slice) path");
    ok = ok && rule(focus.getSnapshot().getElement().get(8).getName().equals("simple"), "element 8 (1st slice) name");
    ok = ok && rule(focus.getSnapshot().getElement().get(8).getType().get(0).getProfile().get(0).getValue().equals("http://hl7.org/fhir/StructureDefinition/patient-birthTime"), "element 9 (2nd slice) profile name");
    ok = ok && rule(focus.getSnapshot().getElement().get(9).getPath().equals("Patient.extension"), "element 9 (2nd slice) path");
    ok = ok && rule(focus.getSnapshot().getElement().get(9).getName().equals("complex"), "element 8 (1st slice) name");
    ok = ok && rule(focus.getSnapshot().getElement().get(9).getType().get(0).getProfile().get(0).getValue().equals("http://hl7.org/fhir/StructureDefinition/patient-nationality"), "element 9 (2nd slice) profile name");
    ok = ok && rule(focus.getSnapshot().getElement().get(10).getPath().equals("Patient.extension.id"), "element 10 (2nd slice).id path");
    ok = ok && rule(focus.getSnapshot().getElement().get(11).getPath().equals("Patient.extension.extension"), "element 11 (2nd slice).extension path");
    ok = ok && rule(focus.getSnapshot().getElement().get(12).getPath().equals("Patient.extension.extension"), "element 12 (2nd slice).extension path");
    ok = ok && rule(focus.getSnapshot().getElement().get(12).getMustSupport(), "element 12 (2nd slice).extension must support");
    ok = ok && rule(focus.getSnapshot().getElement().get(13).getPath().equals("Patient.extension.extension.id"), "element 13 (2nd slice).extension.id path");
    ok = ok && rule(focus.getSnapshot().getElement().get(14).getPath().equals("Patient.extension.extension.extension"), "element 14 (2nd slice).extension.extension path");
    ok = ok && rule(focus.getSnapshot().getElement().get(15).getPath().equals("Patient.extension.extension.url"), "element 15 (2nd slice).extension.url path");
    ok = ok && rule(focus.getSnapshot().getElement().get(16).getPath().equals("Patient.extension.extension.valueCodeableConcept"), "element 16 (2nd slice).extension.valueCodeableConcept path");
    ok = ok && rule(focus.getSnapshot().getElement().get(17).getPath().equals("Patient.extension.extension"), "element 17 (2nd slice).extension path");
    ok = ok && rule(focus.getSnapshot().getElement().get(17).getMax().equals("0"), "element 17 (2nd slice).extension cardinality");
    ok = ok && rule(focus.getSnapshot().getElement().get(18).getPath().equals("Patient.extension.extension.id"), "element 18 (2nd slice).extension.id path");
    ok = ok && rule(focus.getSnapshot().getElement().get(19).getPath().equals("Patient.extension.extension.extension"), "element 19 (2nd slice).extension.extension path");
    ok = ok && rule(focus.getSnapshot().getElement().get(20).getPath().equals("Patient.extension.extension.url"), "element 20 (2nd slice).extension.url path");
    ok = ok && rule(focus.getSnapshot().getElement().get(21).getPath().equals("Patient.extension.extension.valuePeriod"), "element 21 (2nd slice).extension.valuePeriod path");
    ok = ok && rule(focus.getSnapshot().getElement().get(22).getPath().equals("Patient.extension.url"), "element 22 (2nd slice).url path");
    ok = ok && rule(focus.getSnapshot().getElement().get(23).getPath().equals("Patient.extension.value[x]"), "element 23 (2nd slice).url path");
    for (int i = 0; i < base.getSnapshot().getElement().size(); i++) {
        if (ok) {
            ElementDefinition b = base.getSnapshot().getElement().get(i);
            ElementDefinition f = focus.getSnapshot().getElement().get(i <= 7 ? i : i + 16);
            if (!f.hasBase() || !b.getPath().equals(f.getBase().getPath()))
                ok = false;
            else {
                f.setBase(null);
                if (f.getPath().equals("Patient.extension")) {
                    ok = f.hasSlicing();
                    if (ok)
                        f.setSlicing(null);
                }
                if (// no compare that because the definitions get overwritten
                !f.getPath().equals("Patient.extension"))
                    ok = Base.compareDeep(b, f, true);
            }
        }
    }
    if (!ok) {
        compareXml(base, focus);
        throw new FHIRException("Snap shot generation slicing extensions complex (" + (implicit ? "implicit" : "not implicit") + ") failed");
    } else
        System.out.println("Snap shot generation slicing extensions complex (" + (implicit ? "implicit" : "not implicit") + ") passed");
}

Example 80 with ElementDefinition

use of org.hl7.fhir.r4b.model.ElementDefinition in project org.hl7.fhir.core by hapifhir.

the class ProfileUtilitiesTests method testSimple2.

/**
 * This is simple: we just create an empty differential, generate the snapshot, and then insist it must match the base. for a different resource with recursion
 *
 * @param context2
 * @
 * @throws EOperationOutcome
 */
private void testSimple2() throws EOperationOutcome, Exception {
    StructureDefinition focus = new StructureDefinition();
    StructureDefinition base = context.fetchResource(StructureDefinition.class, "http://hl7.org/fhir/StructureDefinition/ValueSet").copy();
    focus.setUrl(Utilities.makeUuidUrn());
    focus.setBase(base.getUrl());
    List<ValidationMessage> messages = new ArrayList<ValidationMessage>();
    new ProfileUtilities(context, messages, null).generateSnapshot(base, focus, focus.getUrl(), "Simple Test");
    boolean ok = base.getSnapshot().getElement().size() == focus.getSnapshot().getElement().size();
    for (int i = 0; i < base.getSnapshot().getElement().size(); i++) {
        if (ok) {
            ElementDefinition b = base.getSnapshot().getElement().get(i);
            ElementDefinition f = focus.getSnapshot().getElement().get(i);
            if (!f.hasBase() || !b.getPath().equals(f.getBase().getPath()))
                ok = false;
            else {
                f.setBase(null);
                ok = Base.compareDeep(b, f, true);
            }
        }
    }
    if (!ok) {
        compareXml(base, focus);
        throw new FHIRException("Snap shot generation simple test failed");
    } else
        System.out.println("Snap shot generation simple test passed");
}