use of org.hl7.fhir.r4b.renderers.utils.BaseWrappers.ResourceWrapper in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method generateDiagnosticReport.
public XhtmlNode generateDiagnosticReport(ResourceWrapper dr) {
XhtmlNode root = new XhtmlNode(NodeType.Element, "div");
XhtmlNode h2 = root.h2();
displayCodeableConcept(h2, getProperty(dr, "code").value());
h2.tx(" ");
PropertyWrapper pw = getProperty(dr, "category");
if (valued(pw)) {
h2.tx("(");
displayCodeableConcept(h2, pw.value());
h2.tx(") ");
}
displayDate(h2, getProperty(dr, "issued").value());
XhtmlNode tbl = root.table("grid");
XhtmlNode tr = tbl.tr();
XhtmlNode tdl = tr.td();
XhtmlNode tdr = tr.td();
populateSubjectSummary(tdl, getProperty(dr, "subject").value());
tdr.b().tx("Report Details");
tdr.br();
pw = getProperty(dr, "perfomer");
if (valued(pw)) {
tdr.addText(pluralise("Performer", pw.getValues().size()) + ":");
for (BaseWrapper v : pw.getValues()) {
tdr.tx(" ");
displayReference(tdr, v);
}
tdr.br();
}
pw = getProperty(dr, "identifier");
if (valued(pw)) {
tdr.addText(pluralise("Identifier", pw.getValues().size()) + ":");
for (BaseWrapper v : pw.getValues()) {
tdr.tx(" ");
displayIdentifier(tdr, v);
}
tdr.br();
}
pw = getProperty(dr, "request");
if (valued(pw)) {
tdr.addText(pluralise("Request", pw.getValues().size()) + ":");
for (BaseWrapper v : pw.getValues()) {
tdr.tx(" ");
displayReferenceId(tdr, v);
}
tdr.br();
}
pw = getProperty(dr, "result");
if (valued(pw)) {
List<ObservationNode> observations = fetchObservations(pw.getValues());
buildObservationsTable(root, observations);
}
pw = getProperty(dr, "conclusion");
if (valued(pw))
displayText(root.para(), pw.value());
pw = getProperty(dr, "result");
if (valued(pw)) {
XhtmlNode p = root.para();
p.b().tx("Coded Diagnoses :");
for (BaseWrapper v : pw.getValues()) {
tdr.tx(" ");
displayCodeableConcept(tdr, v);
}
}
return root;
}
use of org.hl7.fhir.r4b.renderers.utils.BaseWrappers.ResourceWrapper in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method addObservationToTable.
private void addObservationToTable(XhtmlNode tr, ResourceWrapper obs, int i) {
// TODO Auto-generated method stub
// code (+bodysite)
XhtmlNode td = tr.td();
PropertyWrapper pw = getProperty(obs, "result");
if (valued(pw)) {
displayCodeableConcept(td, pw.value());
}
pw = getProperty(obs, "bodySite");
if (valued(pw)) {
td.tx(" (");
displayCodeableConcept(td, pw.value());
td.tx(")");
}
// value / dataAbsentReason (in red)
td = tr.td();
pw = getProperty(obs, "value[x]");
if (valued(pw)) {
if (pw.getTypeCode().equals("CodeableConcept"))
displayCodeableConcept(td, pw.value());
else if (pw.getTypeCode().equals("string"))
displayText(td, pw.value());
else
td.addText(pw.getTypeCode() + " not rendered yet");
}
// units
td = tr.td();
td.tx("to do");
// reference range
td = tr.td();
td.tx("to do");
// flags (status other than F, interpretation, )
td = tr.td();
td.tx("to do");
// issued if different to DR
td = tr.td();
td.tx("to do");
}
use of org.hl7.fhir.r4b.renderers.utils.BaseWrappers.ResourceWrapper in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method generateResourceSummary.
private void generateResourceSummary(XhtmlNode x, ResourceWrapper res, boolean textAlready, boolean showCodeDetails, ResourceContext rc) throws FHIRException, UnsupportedEncodingException, IOException {
if (!textAlready) {
XhtmlNode div = res.getNarrative();
if (div != null) {
if (div.allChildrenAreText())
x.getChildNodes().addAll(div.getChildNodes());
if (div.getChildNodes().size() == 1 && div.getChildNodes().get(0).allChildrenAreText())
x.getChildNodes().addAll(div.getChildNodes().get(0).getChildNodes());
}
x.tx("Generated Summary: ");
}
String path = res.getName();
StructureDefinition profile = context.fetchResource(StructureDefinition.class, path);
if (profile == null)
x.tx("unknown resource " + path);
else {
boolean firstElement = true;
boolean last = false;
for (PropertyWrapper p : res.children()) {
ElementDefinition child = getElementDefinition(profile.getSnapshot().getElement(), path + "." + p.getName(), p);
if (p.getValues().size() > 0 && p.getValues().get(0) != null && child != null && isPrimitive(child) && includeInSummary(child)) {
if (firstElement)
firstElement = false;
else if (last)
x.tx("; ");
boolean first = true;
last = false;
for (BaseWrapper v : p.getValues()) {
if (first)
first = false;
else if (last)
x.tx(", ");
last = displayLeaf(res, v, child, x, p.getName(), showCodeDetails, rc) || last;
}
}
}
}
}
use of org.hl7.fhir.r4b.renderers.utils.BaseWrappers.ResourceWrapper in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method generateByProfile.
private void generateByProfile(ResourceWrapper res, StructureDefinition profile, BaseWrapper e, List<ElementDefinition> allElements, ElementDefinition defn, List<ElementDefinition> children, XhtmlNode x, String path, boolean showCodeDetails) throws FHIRException, UnsupportedEncodingException, IOException {
if (children.isEmpty()) {
renderLeaf(res, e, defn, x, false, showCodeDetails, readDisplayHints(defn));
} else {
for (PropertyWrapper p : splitExtensions(profile, e.children())) {
if (p.hasValues()) {
ElementDefinition child = getElementDefinition(children, path + "." + p.getName(), p);
if (child != null) {
Map<String, String> displayHints = readDisplayHints(child);
if (!exemptFromRendering(child)) {
List<ElementDefinition> grandChildren = getChildrenForPath(allElements, path + "." + p.getName());
filterGrandChildren(grandChildren, path + "." + p.getName(), p);
if (p.getValues().size() > 0 && child != null) {
if (isPrimitive(child)) {
XhtmlNode para = x.addTag("p");
String name = p.getName();
if (name.endsWith("[x]"))
name = name.substring(0, name.length() - 3);
if (showCodeDetails || !isDefaultValue(displayHints, p.getValues())) {
para.addTag("b").addText(name);
para.addText(": ");
if (renderAsList(child) && p.getValues().size() > 1) {
XhtmlNode list = x.addTag("ul");
for (BaseWrapper v : p.getValues()) renderLeaf(res, v, child, list.addTag("li"), false, showCodeDetails, displayHints);
} else {
boolean first = true;
for (BaseWrapper v : p.getValues()) {
if (first)
first = false;
else
para.addText(", ");
renderLeaf(res, v, child, para, false, showCodeDetails, displayHints);
}
}
}
} else if (canDoTable(path, p, grandChildren)) {
x.addTag("h3").addText(Utilities.capitalize(Utilities.camelCase(Utilities.pluralizeMe(p.getName()))));
XhtmlNode tbl = x.addTag("table").setAttribute("class", "grid");
XhtmlNode tr = tbl.addTag("tr");
// work around problem with empty table rows
tr.addTag("td").addText("-");
addColumnHeadings(tr, grandChildren);
for (BaseWrapper v : p.getValues()) {
if (v != null) {
tr = tbl.addTag("tr");
// work around problem with empty table rows
tr.addTag("td").addText("*");
addColumnValues(res, tr, grandChildren, v, showCodeDetails, displayHints);
}
}
} else {
for (BaseWrapper v : p.getValues()) {
if (v != null) {
XhtmlNode bq = x.addTag("blockquote");
bq.addTag("p").addTag("b").addText(p.getName());
generateByProfile(res, profile, v, allElements, child, grandChildren, bq, path + "." + p.getName(), showCodeDetails);
}
}
}
}
}
}
}
}
}
}
use of org.hl7.fhir.r4b.renderers.utils.BaseWrappers.ResourceWrapper in project org.hl7.fhir.core by hapifhir.
the class NarrativeGenerator method generateResourceSummary.
private void generateResourceSummary(XhtmlNode x, ResourceWrapper res, boolean textAlready, boolean showCodeDetails) throws FHIRException, UnsupportedEncodingException, IOException {
if (!textAlready) {
XhtmlNode div = res.getNarrative();
if (div != null) {
if (div.allChildrenAreText())
x.getChildNodes().addAll(div.getChildNodes());
if (div.getChildNodes().size() == 1 && div.getChildNodes().get(0).allChildrenAreText())
x.getChildNodes().addAll(div.getChildNodes().get(0).getChildNodes());
}
x.addText("Generated Summary: ");
}
String path = res.getName();
StructureDefinition profile = context.fetchResource(StructureDefinition.class, path);
if (profile == null)
x.addText("unknown resource " + path);
else {
boolean firstElement = true;
boolean last = false;
for (PropertyWrapper p : res.children()) {
ElementDefinition child = getElementDefinition(profile.getSnapshot().getElement(), path + "." + p.getName(), p);
if (p.getValues().size() > 0 && p.getValues().get(0) != null && child != null && isPrimitive(child) && includeInSummary(child)) {
if (firstElement)
firstElement = false;
else if (last)
x.addText("; ");
boolean first = true;
last = false;
for (BaseWrapper v : p.getValues()) {
if (first)
first = false;
else if (last)
x.addText(", ");
last = displayLeaf(res, v, child, x, p.getName(), showCodeDetails) || last;
}
}
}
}
}
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