Examples with JsonParser org.hl7.fhir.r5.elementmodel.JsonParser used on opensource projects

Example 86 with JsonParser

use of org.hl7.fhir.r5.elementmodel.JsonParser in project org.hl7.fhir.core by hapifhir.

the class VocabTests method test.

@ParameterizedTest(name = "{index}: file {0}")
@MethodSource("data")
public void test(String id, TestDetails test) throws Exception {
    Resource source;
    if (test.getSource().endsWith(".json")) {
        source = (Resource) new JsonParser().parse(TestingUtilities.loadTestResourceStream("r5", "vocab", test.getSource()));
    } else {
        source = (Resource) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "vocab", test.getSource()));
    }
    Resource target;
    if (test.getTarget().endsWith(".json")) {
        target = (Resource) new JsonParser().parse(TestingUtilities.loadTestResourceStream("r5", "vocab", test.getTarget()));
    } else {
        target = (Resource) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "vocab", test.getTarget()));
    }
    if (test.getType() == TestType.Expansion) {
        testExpansion(test, (ValueSet) source, (ValueSet) target);
    } else {
        Assertions.fail("not done yet");
    }
}

Example 87 with JsonParser

use of org.hl7.fhir.r5.elementmodel.JsonParser in project org.hl7.fhir.core by hapifhir.

the class ResourceTest method test.

public Resource test() throws FHIRFormatError, FileNotFoundException, IOException {
    IParser p;
    if (isJson())
        p = new JsonParser();
    else
        p = new XmlParser(false);
    Resource rf = p.parse(new FileInputStream(source));
    FileOutputStream out = new FileOutputStream(source.getAbsoluteFile() + ".out.json");
    JsonParser json1 = new JsonParser();
    json1.setOutputStyle(OutputStyle.PRETTY);
    json1.compose(out, rf);
    out.close();
    JsonParser json = new JsonParser();
    rf = json.parse(new FileInputStream(source.getAbsoluteFile() + ".out.json"));
    out = new FileOutputStream(source.getAbsoluteFile() + ".out.xml");
    XmlParser atom = new XmlParser();
    atom.setOutputStyle(OutputStyle.PRETTY);
    atom.compose(out, rf, true);
    out.close();
    return rf;
}

Example 88 with JsonParser

use of org.hl7.fhir.r5.elementmodel.JsonParser in project org.hl7.fhir.core by hapifhir.

the class JsonDirectTests method test.

@Test
// Hard coded path here
@Disabled
public void test() throws FHIRFormatError, FileNotFoundException, IOException {
    File src = new File(Utilities.path("[tmp]", "obs.xml"));
    File xml = new File(Utilities.path("[tmp]", "xml.xml"));
    File json = new File(Utilities.path("[tmp]", "json.json"));
    File json2 = new File(Utilities.path("[tmp]", "json2.json"));
    FileUtils.copyFile(new File("C:\\work\\org.hl7.fhir\\build\\publish\\observation-decimal.xml"), src);
    Observation obs = (Observation) new XmlParser().parse(new FileInputStream(src));
    new JsonParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(json), obs);
    obs = (Observation) new JsonParser().parse(new FileInputStream(json));
    new JsonParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(json2), obs);
    new XmlParser().setOutputStyle(OutputStyle.PRETTY).compose(new FileOutputStream(xml), obs);
}

Example 89 with JsonParser

use of org.hl7.fhir.r5.elementmodel.JsonParser in project org.hl7.fhir.core by hapifhir.

the class NarrativeGenerationTests method test.

@ParameterizedTest(name = "{index}: file {0}")
@MethodSource("data")
public void test(String id, TestDetails test) throws Exception {
    RenderingContext rc = new RenderingContext(context, null, null, "http://hl7.org/fhir", "", null, ResourceRendererMode.END_USER);
    rc.setDestDir("");
    rc.setHeader(test.isHeader());
    rc.setDefinitionsTarget("test.html");
    rc.setTerminologyServiceOptions(TerminologyServiceOptions.defaults());
    rc.setParser(new TestTypeParser());
    // getting timezones correct (well, at least consistent, so tests pass on any computer)
    rc.setLocale(new java.util.Locale("en", "AU"));
    rc.setTimeZoneId(ZoneId.of("Australia/Sydney"));
    rc.setDateTimeFormatString("yyyy-MM-dd'T'HH:mm:ssZZZZZ");
    rc.setDateFormatString("yyyy-MM-dd");
    rc.setMode(test.technical ? ResourceRendererMode.TECHNICAL : ResourceRendererMode.END_USER);
    Resource source;
    if (TestingUtilities.findTestResource("r5", "narrative", test.getId() + ".json")) {
        source = (Resource) new JsonParser().parse(TestingUtilities.loadTestResourceStream("r5", "narrative", test.getId() + ".json"));
    } else {
        source = (Resource) new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "narrative", test.getId() + ".xml"));
    }
    XhtmlNode x = RendererFactory.factory(source, rc).build(source);
    String expected = TextFile.streamToString(TestingUtilities.loadTestResourceStream("r5", "narrative", test.getId() + ".html"));
    String actual = HEADER + new XhtmlComposer(true, true).compose(x) + FOOTER;
    String expectedFileName = CompareUtilities.tempFile("narrative", test.getId() + ".expected.html");
    String actualFileName = CompareUtilities.tempFile("narrative", test.getId() + ".actual.html");
    TextFile.stringToFile(expected, expectedFileName);
    TextFile.stringToFile(actual, actualFileName);
    String msg = CompareUtilities.checkXMLIsSame(expectedFileName, actualFileName);
    Assertions.assertTrue(msg == null, "Output does not match expected: " + msg);
    if (test.isMeta()) {
        org.hl7.fhir.r5.elementmodel.Element e = Manager.parseSingle(context, TestingUtilities.loadTestResourceStream("r5", "narrative", test.getId() + ".xml"), FhirFormat.XML);
        x = RendererFactory.factory(source, rc).render(new ElementWrappers.ResourceWrapperMetaElement(rc, e));
        expected = TextFile.streamToString(TestingUtilities.loadTestResourceStream("r5", "narrative", test.getId() + "-meta.html"));
        actual = HEADER + new XhtmlComposer(true, true).compose(x) + FOOTER;
        actualFileName = CompareUtilities.tempFile("narrative", test.getId() + "-meta.actual.html");
        TextFile.stringToFile(actual, actualFileName);
        msg = CompareUtilities.checkXMLIsSame(expectedFileName, actualFileName);
        Assertions.assertTrue(msg == null, "Meta output does not match expected: " + msg);
    }
}

Example 90 with JsonParser

use of org.hl7.fhir.r5.elementmodel.JsonParser in project org.hl7.fhir.core by hapifhir.

the class BaseValidator method loadFoundResource.

protected Resource loadFoundResource(List<ValidationMessage> errors, String path, Element resource, Class<? extends Resource> class1) throws FHIRException {
    try {
        FhirPublication v = FhirPublication.fromCode(context.getVersion());
        ByteArrayOutputStream bs = new ByteArrayOutputStream();
        new JsonParser(context).compose(resource, bs, OutputStyle.NORMAL, resource.getIdBase());
        byte[] json = bs.toByteArray();
        Resource r5 = null;
        switch(v) {
            case DSTU1:
                rule(errors, IssueType.INVALID, resource.line(), resource.col(), path, false, I18nConstants.UNSUPPORTED_VERSION_R1, resource.getIdBase());
                // this can't happen
                return null;
            case DSTU2:
                org.hl7.fhir.dstu2.model.Resource r2 = new org.hl7.fhir.dstu2.formats.JsonParser().parse(json);
                r5 = VersionConvertorFactory_10_50.convertResource(r2);
                break;
            case DSTU2016May:
                org.hl7.fhir.dstu2016may.model.Resource r2a = new org.hl7.fhir.dstu2016may.formats.JsonParser().parse(json);
                r5 = VersionConvertorFactory_14_50.convertResource(r2a);
                break;
            case STU3:
                org.hl7.fhir.dstu3.model.Resource r3 = new org.hl7.fhir.dstu3.formats.JsonParser().parse(json);
                r5 = VersionConvertorFactory_30_50.convertResource(r3);
                break;
            case R4:
                org.hl7.fhir.r4.model.Resource r4 = new org.hl7.fhir.r4.formats.JsonParser().parse(json);
                r5 = VersionConvertorFactory_40_50.convertResource(r4);
                break;
            case R5:
                r5 = new org.hl7.fhir.r5.formats.JsonParser().parse(json);
                break;
            default:
                // this can't happen
                return null;
        }
        if (class1.isInstance(r5))
            return (Resource) r5;
        else {
            rule(errors, IssueType.INVALID, resource.line(), resource.col(), path, false, I18nConstants.REFERENCE_REF_WRONGTARGET_LOAD, resource.getIdBase(), class1.toString(), r5.fhirType());
            return null;
        }
    } catch (IOException e) {
        throw new FHIRException(e);
    }
}