Examples with IParser org.hl7.fhir.r5.formats.IParser used on opensource projects

Example 96 with IParser

use of org.hl7.fhir.r5.formats.IParser in project openmrs-module-fhir2 by openmrs.

the class FhirImmunizationServiceImplTest method saveImmunization_shouldCreateEncounterAndObsGroupWhenNewImmunization.

@Test
public void saveImmunization_shouldCreateEncounterAndObsGroupWhenNewImmunization() {
    // setup
    FhirContext ctx = FhirContext.forR4();
    IParser parser = ctx.newJsonParser();
    Immunization newImmunization = parser.parseResource(Immunization.class, "{\n" + "  \"resourceType\": \"Immunization\",\n" + "  \"status\": \"completed\",\n" + "  \"vaccineCode\": {\n" + "    \"coding\": [\n" + "      {\n" + "        \"code\": \"15f83cd6-64e9-4e06-a5f9-364d3b14a43d\",\n" + "        \"display\": \"Aspirin as a vaccine\"\n" + "      }\n" + "    ]\n" + "  },\n" + "  \"patient\": {\n" + "    \"reference\": \"Patient/a7e04421-525f-442f-8138-05b619d16def\",\n" + "    \"type\": \"Patient\"\n" + "  },\n" + "  \"encounter\": {\n" + "    \"reference\": \"Encounter/7d8c1980-6b78-11e0-93c3-18a905e044dc\",\n" + "    \"type\": \"Encounter\"\n" + "  },\n" + "  \"occurrenceDateTime\": \"2020-07-08T18:30:00.000Z\",\n" + "  \"manufacturer\": {\n" + "    \"display\": \"Acme\"\n" + "  },\n" + "  \"lotNumber\": \"FOO1234\",\n" + "  \"expirationDate\": \"2022-07-31T18:30:00.000Z\",\n" + "  \"performer\": [\n" + "    {\n" + "      \"actor\": {\n" + "        \"reference\": \"Practitioner/f9badd80-ab76-11e2-9e96-0800200c9a66\",\n" + "        \"type\": \"Practitioner\"\n" + "      }\n" + "    }\n" + "  ],\n" + "  \"protocolApplied\": [\n" + "    {\n" + "      \"doseNumberPositiveInt\": 2,\n" + "      \"series\": \"Dose 2\"\n" + "    }\n" + "  ]\n" + "}");
    // replay
    Immunization savedImmunization = service.create(newImmunization);
    Obs obs = obsService.getObsByUuid(savedImmunization.getId());
    // verify
    helper.validateImmunizationObsGroup(obs);
    assertObsCommons(obs, "a7e04421-525f-442f-8138-05b619d16def", "7d8c1980-6b78-11e0-93c3-18a905e044dc", "f9badd80-ab76-11e2-9e96-0800200c9a66");
    obs.getGroupMembers().forEach(o -> assertObsCommons(o, "a7e04421-525f-442f-8138-05b619d16def", "7d8c1980-6b78-11e0-93c3-18a905e044dc", "f9badd80-ab76-11e2-9e96-0800200c9a66"));
    Map<String, Obs> members = helper.getObsMembersMap(obs);
    assertThat(members.get(CIEL_984).getValueCoded().getUuid(), is("15f83cd6-64e9-4e06-a5f9-364d3b14a43d"));
    assertThat(members.get(CIEL_1410).getValueDatetime(), equalTo(new DateTimeType("2020-07-08T18:30:00.000Z").getValue()));
    assertThat(members.get(CIEL_1418).getValueNumeric(), equalTo(2.0));
    assertThat(members.get(CIEL_1419).getValueText(), is("Acme"));
    assertThat(members.get(CIEL_1420).getValueText(), is("FOO1234"));
    assertThat(members.get(CIEL_165907).getValueDatetime(), equalTo(new DateTimeType("2022-07-31T18:30:00.000Z").getValue()));
}

Example 97 with IParser

use of org.hl7.fhir.r5.formats.IParser in project ab2d by CMSgov.

the class EobTestDataUtil method createEOB.

public static IBaseResource createEOB() {
    IBaseResource eob;
    SimpleDateFormat sdf = new SimpleDateFormat("MM/dd/yyyy");
    ResourceLoader resourceLoader = new DefaultResourceLoader();
    Resource resource = resourceLoader.getResource("classpath:" + File.separator + "test-data" + File.separator + "EOB-for-Carrier-Claims.json");
    InputStream inputStream = getEOBInputStream(resource);
    final EncodingEnum respType = EncodingEnum.forContentType(EncodingEnum.JSON_PLAIN_STRING);
    final IParser parser = respType.newParser(FhirContext.forDstu3());
    final org.hl7.fhir.dstu3.model.ExplanationOfBenefit explanationOfBenefit = parser.parseResource(org.hl7.fhir.dstu3.model.ExplanationOfBenefit.class, inputStream);
    eob = ExplanationOfBenefitTrimmerSTU3.getBenefit(explanationOfBenefit);
    org.hl7.fhir.dstu3.model.Period billingPeriod = new org.hl7.fhir.dstu3.model.Period();
    try {
        billingPeriod.setStart(sdf.parse("01/02/2020"));
        final LocalDate now = LocalDate.now();
        final DateTimeFormatter formatter = DateTimeFormatter.ofPattern("MM/dd/yyyy");
        final String nowFormatted = now.format(formatter);
        billingPeriod.setEnd(sdf.parse(nowFormatted));
    } catch (Exception ignored) {
    }
    // noinspection ConstantConditions
    ((org.hl7.fhir.dstu3.model.ExplanationOfBenefit) eob).setBillablePeriod(billingPeriod);
    return eob;
}

Example 98 with IParser

use of org.hl7.fhir.r5.formats.IParser in project ab2d by CMSgov.

the class CapabilityAPIV1 method capabilityStatement.

@Operation(summary = CAP_REQ)
@ApiResponses(value = { @ApiResponse(responseCode = "200", description = CAP_DESC + " https://www.hl7.org/fhir/STU3/capabilitystatement.html", headers = { @Header(name = CONTENT_TYPE, description = APPLICATION_JSON) }) })
@ResponseStatus(value = HttpStatus.OK)
@GetMapping(value = "/metadata")
public ResponseEntity<String> capabilityStatement(HttpServletRequest request) {
    IParser parser = STU3.getJsonParser();
    eventLogger.log(new ApiResponseEvent(MDC.get(ORGANIZATION), null, HttpStatus.OK, CAP_STMT, CAP_RET, (String) request.getAttribute(REQUEST_ID)));
    String server = common.getCurrentUrl(request).replace("/metadata", "");
    CapabilityStatement capabilityStatement = CapabilityStatementSTU3.populateCS(server);
    return new ResponseEntity<>(parser.encodeResourceToString(capabilityStatement), null, HttpStatus.OK);
}

Example 99 with IParser

use of org.hl7.fhir.r5.formats.IParser in project integration-adaptor-111 by nhsconnect.

the class EncounterReportServiceTest method shouldTransformAndPopulateToGP.

@Test
public void shouldTransformAndPopulateToGP() throws JMSException, XmlException {
    ItkReportHeader header = new ItkReportHeader();
    header.setTrackingId(TRACKING_ID);
    header.setSpecKey(SPECIFICATION_KEY);
    header.setSpecVal(SPECIFICATION_VALUE);
    POCDMT000002UK01ClinicalDocument1 clinicalDoc = mock(POCDMT000002UK01ClinicalDocument1.class);
    Bundle encounterBundle = mock(Bundle.class);
    when(encounterReportBundleService.createEncounterBundle(clinicalDoc, header, MESSAGE_ID)).thenReturn(encounterBundle);
    IParser parser = mock(IParser.class);
    when(fhirContext.newJsonParser()).thenReturn(parser);
    when(parser.setPrettyPrint(true)).thenReturn(parser);
    when(parser.encodeResourceToString(encounterBundle)).thenReturn(ENCOUNTER_REPORT_MAPPING);
    Session session = mock(Session.class);
    when(session.createTextMessage(any())).thenReturn(textMessage);
    encounterReportService.transformAndPopulateToGP(clinicalDoc, MESSAGE_ID, header);
    ArgumentCaptor<MessageCreator> argumentCaptor = ArgumentCaptor.forClass(MessageCreator.class);
    verify(jmsTemplate).send(eq(QUEUE_NAME), argumentCaptor.capture());
    argumentCaptor.getValue().createMessage(session);
    verify(session).createTextMessage(ENCOUNTER_REPORT_MAPPING);
}

Example 100 with IParser

use of org.hl7.fhir.r5.formats.IParser in project fhir-bridge by ehrbase.

the class AbstractBundleMappingTestSetupIT method create.

@Override
protected void create(String path) throws IOException {
    String resource = testFileLoader.loadResourceToString(path);
    String outcome = client.transaction().withBundle(resource.replaceAll(PATIENT_ID_TOKEN, PATIENT_ID)).execute();
    IParser parser = context.newJsonParser();
    Bundle bundle = parser.parseResource(Bundle.class, outcome);
    assertNotNull(bundle.getId());
}