Examples with IParser org.hl7.fhir.r5.formats.IParser used on opensource projects

Example 86 with IParser

use of org.hl7.fhir.r5.formats.IParser in project clinical_quality_language by cqframework.

the class DataRequirementsProcessorTest method TestLibraryDataRequirementsRecursive.

@Test
public void TestLibraryDataRequirementsRecursive() {
    CqlTranslatorOptions cqlTranslatorOptions = new CqlTranslatorOptions();
    cqlTranslatorOptions.getFormats().add(CqlTranslator.Format.JSON);
    cqlTranslatorOptions.setCollapseDataRequirements(true);
    try {
        CqlTranslator translator = createTranslator("DataRequirements/DataRequirementsLibraryTest.cql", cqlTranslatorOptions);
        translator.toELM();
        assertTrue(translator.getErrors().isEmpty());
        libraryManager.cacheLibrary(translator.getTranslatedLibrary());
        DataRequirementsProcessor dqReqTrans = new DataRequirementsProcessor();
        org.hl7.fhir.r5.model.Library moduleDefinitionLibrary = dqReqTrans.gatherDataRequirements(libraryManager, translator.getTranslatedLibrary(), cqlTranslatorOptions, null, false);
        assertTrue(moduleDefinitionLibrary.getType().getCode("http://terminology.hl7.org/CodeSystem/library-type").equalsIgnoreCase("module-definition"));
        DataRequirement encounterRequirement = null;
        for (DataRequirement dr : moduleDefinitionLibrary.getDataRequirement()) {
            if (dr.getType() == Enumerations.FHIRAllTypes.ENCOUNTER) {
                encounterRequirement = dr;
                break;
            }
        }
        assertTrue(encounterRequirement != null);
        FhirContext context = getFhirContext();
        IParser parser = context.newJsonParser();
        String moduleDefString = parser.setPrettyPrint(true).encodeResourceToString(moduleDefinitionLibrary);
        logger.debug(moduleDefString);
    } catch (IOException ioException) {
        ioException.printStackTrace();
    }
}

Example 87 with IParser

use of org.hl7.fhir.r5.formats.IParser in project cqf-ruler by DBCG.

the class STU3CarePlanToCdsCard method convert.

private static List<CdsCard> convert(RequestGroup requestGroup) {
    List<CdsCard> cards = new ArrayList<>();
    // links
    List<CdsCard.Links> links = new ArrayList<>();
    if (requestGroup.hasExtension()) {
        for (Extension extension : requestGroup.getExtension()) {
            CdsCard.Links link = new CdsCard.Links();
            if (extension.getValue() instanceof Attachment) {
                Attachment attachment = (Attachment) extension.getValue();
                if (attachment.hasUrl()) {
                    link.setUrl(attachment.getUrl());
                }
                if (attachment.hasTitle()) {
                    link.setLabel(attachment.getTitle());
                }
                if (attachment.hasExtension()) {
                    link.setType(attachment.getExtensionFirstRep().getValue().primitiveValue());
                }
            } else {
                throw new RuntimeException("Invalid link extension type: " + extension.getValue().fhirType());
            }
            links.add(link);
        }
    }
    if (requestGroup.hasAction()) {
        for (RequestGroup.RequestGroupActionComponent action : requestGroup.getAction()) {
            IParser jsonParser = FhirContext.forCached(FhirVersionEnum.DSTU3).newJsonParser().setPrettyPrint(true);
            CdsCard card = new CdsCard(jsonParser);
            // basic
            if (action.hasTitle()) {
                card.setSummary(action.getTitle());
            }
            if (action.hasDescription()) {
                card.setDetail(action.getDescription());
            }
            if (action.hasExtension()) {
                card.setIndicator(action.getExtensionFirstRep().getValue().toString());
            }
            // source
            if (action.hasDocumentation()) {
                // Assuming first related artifact has everything
                RelatedArtifact documentation = action.getDocumentationFirstRep();
                CdsCard.Source source = new CdsCard.Source();
                if (documentation.hasDisplay()) {
                    source.setLabel(documentation.getDisplay());
                }
                if (documentation.hasUrl()) {
                    source.setUrl(documentation.getUrl());
                }
                if (documentation.hasDocument() && documentation.getDocument().hasUrl()) {
                    source.setIcon(documentation.getDocument().getUrl());
                }
                card.setSource(source);
            }
            if (action.hasSelectionBehavior()) {
                card.setSelectionBehavior(action.getSelectionBehavior().toCode());
            }
            // suggestions
            // TODO - uuid
            boolean hasSuggestions = false;
            CdsCard.Suggestions suggestions = new CdsCard.Suggestions();
            CdsCard.Suggestions.Action actions = new CdsCard.Suggestions.Action();
            if (action.hasLabel()) {
                suggestions.setLabel(action.getLabel());
                hasSuggestions = true;
                if (action.hasDescription()) {
                    actions.setDescription(action.getDescription());
                }
                if (action.hasType() && !action.getType().getCode().equals("fire-event")) {
                    String code = action.getType().getCode();
                    actions.setType(CdsCard.Suggestions.Action.ActionType.valueOf(code.equals("remove") ? "delete" : code));
                }
                if (action.hasResource()) {
                    if (actions.getType().name().equalsIgnoreCase("create")) {
                        action.getResourceTarget().setId((String) null);
                    }
                    actions.setResource(action.getResourceTarget());
                }
            }
            if (hasSuggestions) {
                suggestions.addAction(actions);
                card.addSuggestion(suggestions);
            }
            if (!links.isEmpty()) {
                card.setLinks(links);
            }
            cards.add(card);
        }
    }
    return cards;
}

Example 88 with IParser

use of org.hl7.fhir.r5.formats.IParser in project beneficiary-fhir-data by CMSgov.

the class HHAClaimTransformerV2Test method before.

@BeforeEach
public void before() {
    claim = generateClaim();
    ExplanationOfBenefit genEob = HHAClaimTransformerV2.transform(new MetricRegistry(), claim, Optional.empty());
    IParser parser = fhirContext.newJsonParser();
    String json = parser.encodeResourceToString(genEob);
    eob = parser.parseResource(ExplanationOfBenefit.class, json);
}

Example 89 with IParser

use of org.hl7.fhir.r5.formats.IParser in project beneficiary-fhir-data by CMSgov.

the class BeneficiaryTransformerV2Test method createPatient.

private void createPatient(RequestHeaders reqHeaders) {
    Patient genPatient = BeneficiaryTransformerV2.transform(new MetricRegistry(), beneficiary, reqHeaders);
    IParser parser = fhirContext.newJsonParser();
    String json = parser.encodeResourceToString(genPatient);
    patient = parser.parseResource(Patient.class, json);
}

Example 90 with IParser

use of org.hl7.fhir.r5.formats.IParser in project beneficiary-fhir-data by CMSgov.

the class SNFClaimTransformerV2Test method before.

@BeforeEach
public void before() {
    claim = generateClaim();
    ExplanationOfBenefit genEob = SNFClaimTransformerV2.transform(new MetricRegistry(), claim, Optional.empty());
    IParser parser = fhirContext.newJsonParser();
    String json = parser.encodeResourceToString(genEob);
    eob = parser.parseResource(ExplanationOfBenefit.class, json);
}