Examples with Library org.hl7.fhir.r5.model.Library used on opensource projects

Example 56 with Library

use of org.hl7.fhir.r5.model.Library in project quality-measure-and-cohort-service by Alvearie.

the class MeasureEvaluatorTest method multilevel_library_dependencies___successfully_loaded_and_evaluated.

@Test
public void multilevel_library_dependencies___successfully_loaded_and_evaluated() throws Exception {
    mockFhirResourceRetrieval("/metadata?_format=json", getCapabilityStatement());
    Patient patient = getPatient("123", AdministrativeGender.MALE, "1970-10-10");
    mockFhirResourceRetrieval(patient);
    Library nestedHelperLibrary = mockLibraryRetrieval("NestedChild", DEFAULT_VERSION, "cql/fhir-measure-nested-libraries/test-nested-child.cql");
    Library helperLibrary = mockLibraryRetrieval("Child", DEFAULT_VERSION, "cql/fhir-measure-nested-libraries/test-child.cql");
    helperLibrary.addRelatedArtifact(asRelation(nestedHelperLibrary));
    Library library = mockLibraryRetrieval("Parent", DEFAULT_VERSION, "cql/fhir-measure-nested-libraries/test-parent.cql");
    library.addRelatedArtifact(asRelation(helperLibrary));
    Measure measure = getCareGapMeasure("NestedLibraryMeasure", library, expressionsByPopulationType, "CareGap1", "CareGap2");
    mockFhirResourceRetrieval(measure);
    Map<String, Parameter> passingParameters = new HashMap<>();
    passingParameters.put("InInitialPopulation", new BooleanParameter(true));
    List<MeasureContext> measureContexts = new ArrayList<>();
    measureContexts.add(new MeasureContext(measure.getId(), passingParameters));
    List<MeasureReport> reports = evaluator.evaluatePatientMeasures(patient.getId(), measureContexts);
    assertEquals(1, reports.size());
    MeasureReport report = reports.get(0);
    verifyStandardPopulationCounts(report);
}

Example 57 with Library

use of org.hl7.fhir.r5.model.Library in project quality-measure-and-cohort-service by Alvearie.

the class MeasureEvaluatorTest method in_populations_no_evaluated_resources_returned.

@Test
public void in_populations_no_evaluated_resources_returned() throws Exception {
    CapabilityStatement metadata = getCapabilityStatement();
    mockFhirResourceRetrieval("/metadata?_format=json", metadata);
    Patient patient = getPatient("123", AdministrativeGender.MALE, "1970-10-10");
    mockFhirResourceRetrieval(patient);
    Library library = setupDefineReturnLibrary();
    expressionsByPopulationType.clear();
    expressionsByPopulationType.put(MeasurePopulationType.INITIALPOPULATION, INITIAL_POPULATION);
    expressionsByPopulationType.put(MeasurePopulationType.DENOMINATOR, DENOMINATOR);
    expressionsByPopulationType.put(MeasurePopulationType.NUMERATOR, NUMERATOR);
    Measure measure = getProportionMeasure("ProportionMeasureName", library, expressionsByPopulationType);
    mockFhirResourceRetrieval(measure);
    MeasureReport report = evaluator.evaluatePatientMeasure(measure.getId(), patient.getId(), null, new MeasureEvidenceOptions());
    assertNotNull(report);
    assertTrue(report.getEvaluatedResource().isEmpty());
    assertEquals(null, report.getExtensionByUrl(CDMConstants.EVIDENCE_URL));
}

Example 58 with Library

use of org.hl7.fhir.r5.model.Library in project quality-measure-and-cohort-service by Alvearie.

the class MeasureTestBase method getCohortMeasure.

public Measure getCohortMeasure(String measureName, Library library, String expression) throws Exception {
    Measure measure = getTemplateMeasure(measureName, library, MeasureScoring.COHORT);
    Measure.MeasureGroupComponent group = new Measure.MeasureGroupComponent();
    addPopulations(group, Collections.singletonMap(MeasurePopulationType.INITIALPOPULATION, expression));
    measure.addGroup(group);
    return measure;
}

Example 59 with Library

use of org.hl7.fhir.r5.model.Library in project quality-measure-and-cohort-service by Alvearie.

the class MeasureTestBase method getProportionMeasure.

public Measure getProportionMeasure(String measureName, Library library, Map<MeasurePopulationType, String> expressionsByPopType) throws Exception {
    Measure measure = getTemplateMeasure(measureName, library, MeasureScoring.PROPORTION);
    Measure.MeasureGroupComponent group = new Measure.MeasureGroupComponent();
    addPopulations(group, expressionsByPopType);
    measure.addGroup(group);
    return measure;
}

Example 60 with Library

use of org.hl7.fhir.r5.model.Library in project quality-measure-and-cohort-service by Alvearie.

the class MeasureTestBase method mockLibraryRetrieval.

protected Library mockLibraryRetrieval(String libraryName, String libraryVersion, String... cqlResource) throws Exception {
    Library library = getLibrary(libraryName, libraryVersion, cqlResource);
    mockFhirResourceRetrieval(library);
    Bundle bundle = getBundle(library);
    String url = URLEncoder.encode(library.getUrl(), StandardCharsets.UTF_8.toString());
    if (library.getVersion() != null) {
        url += "&version=" + library.getVersion();
    }
    mockFhirResourceRetrieval("/Library?url=" + url + "&_format=json", bundle);
    mockFhirResourceRetrieval("/Library?name%3Aexact=" + library.getName() + "&_format=json", bundle);
    mockFhirResourceRetrieval("/Library?name%3Aexact=" + library.getName() + "&version=" + library.getVersion() + "&_format=json", bundle);
    return library;
}