Search in sources :

Example 31 with Questionnaire

use of org.hl7.fhir.r5.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class Params method loadCliContext.

/**
 * TODO Don't do this all in one for loop. Use the above methods.
 */
public static CliContext loadCliContext(String[] args) throws Exception {
    CliContext cliContext = new CliContext();
    // load the parameters - so order doesn't matter
    for (int i = 0; i < args.length; i++) {
        if (args[i].equals(VERSION)) {
            cliContext.setSv(VersionUtilities.getCurrentPackageVersion(args[++i]));
        } else if (args[i].equals(OUTPUT)) {
            if (i + 1 == args.length)
                throw new Error("Specified -output without indicating output file");
            else
                cliContext.setOutput(args[++i]);
        } else if (args[i].equals(HTML_OUTPUT)) {
            if (i + 1 == args.length)
                throw new Error("Specified -html-output without indicating output file");
            else
                cliContext.setHtmlOutput(args[++i]);
        } else if (args[i].equals(PROXY)) {
            // ignore next parameter
            i++;
        } else if (args[i].equals(PROXY_AUTH)) {
            i++;
        } else if (args[i].equals(PROFILE)) {
            String p = null;
            if (i + 1 == args.length) {
                throw new Error("Specified -profile without indicating profile source");
            } else {
                p = args[++i];
                cliContext.addProfile(p);
            }
        } else if (args[i].equals(BUNDLE)) {
            String p = null;
            String r = null;
            if (i + 1 == args.length) {
                throw new Error("Specified -profile without indicating bundle rule ");
            } else {
                r = args[++i];
            }
            if (i + 1 == args.length) {
                throw new Error("Specified -profile without indicating profile source");
            } else {
                p = args[++i];
            }
            cliContext.getBundleValidationRules().add(new BundleValidationRule(r, p));
        } else if (args[i].equals(QUESTIONNAIRE)) {
            if (i + 1 == args.length)
                throw new Error("Specified -questionnaire without indicating questionnaire mode");
            else {
                String q = args[++i];
                cliContext.setQuestionnaireMode(QuestionnaireMode.fromCode(q));
            }
        } else if (args[i].equals(LEVEL)) {
            if (i + 1 == args.length)
                throw new Error("Specified -level without indicating level mode");
            else {
                String q = args[++i];
                cliContext.setLevel(ValidationLevel.fromCode(q));
            }
        } else if (args[i].equals(NATIVE)) {
            cliContext.setDoNative(true);
        } else if (args[i].equals(ASSUME_VALID_REST_REF)) {
            cliContext.setAssumeValidRestReferences(true);
        } else if (args[i].equals(DEBUG)) {
            cliContext.setDoDebug(true);
        } else if (args[i].equals(SCT)) {
            cliContext.setSnomedCT(args[++i]);
        } else if (args[i].equals(RECURSE)) {
            cliContext.setRecursive(true);
        } else if (args[i].equals(SHOW_MESSAGES_FROM_REFERENCES)) {
            cliContext.setShowMessagesFromReferences(true);
        } else if (args[i].equals(LOCALE)) {
            if (i + 1 == args.length) {
                throw new Error("Specified -locale without indicating locale");
            } else {
                cliContext.setLocale(new Locale(args[++i]));
            }
        } else if (args[i].equals(EXTENSIONS)) {
            cliContext.getExtensions().add(args[++i]);
        } else if (args[i].equals(NO_INTERNAL_CACHING)) {
            cliContext.setNoInternalCaching(true);
        } else if (args[i].equals(NO_EXTENSIBLE_BINDING_WARNINGS)) {
            cliContext.setNoExtensibleBindingMessages(true);
        } else if (args[i].equals(NO_UNICODE_BIDI_CONTROL_CHARS)) {
            cliContext.setNoUnicodeBiDiControlChars(true);
        } else if (args[i].equals(NO_INVARIANTS)) {
            cliContext.setNoInvariants(true);
        } else if (args[i].equals(WANT_INVARIANTS_IN_MESSAGES)) {
            cliContext.setWantInvariantsInMessages(true);
        } else if (args[i].equals(HINT_ABOUT_NON_MUST_SUPPORT)) {
            cliContext.setHintAboutNonMustSupport(true);
        } else if (args[i].equals(TO_VERSION)) {
            cliContext.setTargetVer(args[++i]);
            cliContext.setMode(EngineMode.VERSION);
        } else if (args[i].equals(DO_NATIVE)) {
            cliContext.setCanDoNative(true);
        } else if (args[i].equals(NO_NATIVE)) {
            cliContext.setCanDoNative(false);
        } else if (args[i].equals(TRANSFORM)) {
            cliContext.setMap(args[++i]);
            cliContext.setMode(EngineMode.TRANSFORM);
        } else if (args[i].equals(COMPILE)) {
            cliContext.setMap(args[++i]);
            cliContext.setMode(EngineMode.COMPILE);
        } else if (args[i].equals(NARRATIVE)) {
            cliContext.setMode(EngineMode.NARRATIVE);
        } else if (args[i].equals(SPREADSHEET)) {
            cliContext.setMode(EngineMode.SPREADSHEET);
        } else if (args[i].equals(SNAPSHOT)) {
            cliContext.setMode(EngineMode.SNAPSHOT);
        } else if (args[i].equals(SECURITY_CHECKS)) {
            cliContext.setSecurityChecks(true);
        } else if (args[i].equals(CRUMB_TRAIL)) {
            cliContext.setCrumbTrails(true);
        } else if (args[i].equals(VERBOSE)) {
            cliContext.setCrumbTrails(true);
        } else if (args[i].equals(ALLOW_EXAMPLE_URLS)) {
            String bl = args[++i];
            if ("true".equals(bl)) {
                cliContext.setAllowExampleUrls(true);
            } else if ("false".equals(bl)) {
                cliContext.setAllowExampleUrls(false);
            } else {
                throw new Error("Value for " + ALLOW_EXAMPLE_URLS + " not understood: " + bl);
            }
        } else if (args[i].equals(SHOW_TIMES)) {
            cliContext.setShowTimes(true);
        } else if (args[i].equals(OUTPUT_STYLE)) {
            cliContext.setOutputStyle(args[++i]);
        } else if (args[i].equals(SCAN)) {
            cliContext.setMode(EngineMode.SCAN);
        } else if (args[i].equals(TERMINOLOGY)) {
            if (i + 1 == args.length)
                throw new Error("Specified -tx without indicating terminology server");
            else
                cliContext.setTxServer("n/a".equals(args[++i]) ? null : args[i]);
        } else if (args[i].equals(TERMINOLOGY_LOG)) {
            if (i + 1 == args.length)
                throw new Error("Specified -txLog without indicating file");
            else
                cliContext.setTxLog(args[++i]);
        } else if (args[i].equals(TERMINOLOGY_CACHE)) {
            if (i + 1 == args.length)
                throw new Error("Specified -txCache without indicating file");
            else
                cliContext.setTxCache(args[++i]);
        } else if (args[i].equals(LOG)) {
            if (i + 1 == args.length)
                throw new Error("Specified -log without indicating file");
            else
                cliContext.setMapLog(args[++i]);
        } else if (args[i].equals(LANGUAGE)) {
            if (i + 1 == args.length)
                throw new Error("Specified -language without indicating language");
            else
                cliContext.setLang(args[++i]);
        } else if (args[i].equals(IMPLEMENTATION_GUIDE) || args[i].equals(DEFINITION)) {
            if (i + 1 == args.length)
                throw new Error("Specified " + args[i] + " without indicating ig file");
            else {
                String s = args[++i];
                String version = Common.getVersionFromIGName(null, s);
                if (version == null) {
                    cliContext.addIg(s);
                } else {
                    cliContext.setSv(version);
                }
            }
        } else if (args[i].equals(MAP)) {
            if (cliContext.getMap() == null) {
                if (i + 1 == args.length)
                    throw new Error("Specified -map without indicating map file");
                else
                    cliContext.setMap(args[++i]);
            } else {
                throw new Exception("Can only nominate a single -map parameter");
            }
        } else if (args[i].startsWith(X)) {
            i++;
        } else if (args[i].equals(CONVERT)) {
            cliContext.setMode(EngineMode.CONVERT);
        } else if (args[i].equals(FHIRPATH)) {
            cliContext.setMode(EngineMode.FHIRPATH);
            if (cliContext.getFhirpath() == null)
                if (i + 1 == args.length)
                    throw new Error("Specified -fhirpath without indicating a FHIRPath expression");
                else
                    cliContext.setFhirpath(args[++i]);
            else
                throw new Exception("Can only nominate a single -fhirpath parameter");
        } else {
            cliContext.addSource(args[i]);
        }
    }
    return cliContext;
}
Also used : Locale(java.util.Locale) BundleValidationRule(org.hl7.fhir.r5.utils.validation.BundleValidationRule) CliContext(org.hl7.fhir.validation.cli.model.CliContext)

Example 32 with Questionnaire

use of org.hl7.fhir.r5.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class RdfParser method composeQuestionnaireQuestionnaireItemAnswerOptionComponent.

protected void composeQuestionnaireQuestionnaireItemAnswerOptionComponent(Complex parent, String parentType, String name, Questionnaire.QuestionnaireItemAnswerOptionComponent element, int index) {
    if (element == null)
        return;
    Complex t;
    if (Utilities.noString(parentType))
        t = parent;
    else {
        t = parent.predicate("fhir:" + parentType + '.' + name);
    }
    composeBackboneElement(t, "answerOption", name, element, index);
    if (element.hasValue())
        composeType(t, "Questionnaire", "value", element.getValue(), -1);
    if (element.hasInitialSelectedElement())
        composeBoolean(t, "Questionnaire", "initialSelected", element.getInitialSelectedElement(), -1);
}
Also used : Complex(org.hl7.fhir.r4.utils.formats.Turtle.Complex)

Example 33 with Questionnaire

use of org.hl7.fhir.r5.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireRenderer method renderDefinition.

private boolean renderDefinition(XhtmlNode tbl, Questionnaire q, QuestionnaireItemComponent qi, List<QuestionnaireItemComponent> parents) throws IOException {
    boolean ext = false;
    XhtmlNode td = tbl.tr().td("structure").colspan("2").span(null, null).attribute("class", "self-link-parent");
    td.an("item." + qi.getLinkId());
    for (QuestionnaireItemComponent p : parents) {
        td.ah("#item." + p.getLinkId()).img(Utilities.path(context.getLocalPrefix(), "icon_q_item.png"));
        td.tx(" > ");
    }
    td.img(Utilities.path(context.getLocalPrefix(), "icon_q_item.png"));
    td.tx(" Item ");
    td.b().tx(qi.getLinkId());
    // general information
    defn(tbl, "Link Id", qi.getLinkId());
    defn(tbl, "Prefix", qi.getPrefix());
    defn(tbl, "Text", qi.getText());
    defn(tbl, "Type", qi.getType().getDisplay());
    defn(tbl, "Required", qi.getRequired(), true);
    defn(tbl, "Repeats", qi.getRepeats(), true);
    defn(tbl, "Read Only", qi.getReadOnly(), false);
    if (ToolingExtensions.readBoolExtension(qi, "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject")) {
        defn(tbl, "Subject", "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-isSubject", "This element changes who the subject of the question is", null);
    }
    // content control
    defn(tbl, "Max Length", qi.getMaxLength());
    if (qi.hasAnswerValueSet()) {
        defn(tbl, "Value Set", qi.getDefinition(), context.getWorker().fetchResource(ValueSet.class, qi.getAnswerValueSet()));
    }
    if (qi.hasAnswerOption()) {
        XhtmlNode tr = tbl.tr();
        tr.td().tx("Allowed Answers");
        XhtmlNode ul = tr.td().ul();
        for (QuestionnaireItemAnswerOptionComponent ans : qi.getAnswerOption()) {
            XhtmlNode li = ul.li();
            render(li, ans.getValue());
            if (ans.getInitialSelected()) {
                li.tx(" (initially selected)");
            }
        }
    }
    if (qi.hasInitial()) {
        XhtmlNode tr = tbl.tr();
        tr.td().tx(Utilities.pluralize("Initial Answer", qi.getInitial().size()));
        if (qi.getInitial().size() == 1) {
            render(tr.td(), qi.getInitialFirstRep().getValue());
        } else {
            XhtmlNode ul = tr.td().ul();
            for (QuestionnaireItemInitialComponent ans : qi.getInitial()) {
                XhtmlNode li = ul.li();
                render(li, ans.getValue());
            }
        }
    }
    // appearance
    if (qi.hasExtension("http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory")) {
        XhtmlNode tr = tbl.tr();
        tr.td().ah("http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory").tx("Display Category");
        render(tr.td(), qi.getExtensionByUrl("http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory").getValue());
    }
    if (ToolingExtensions.readBoolExtension(qi, "http://hl7.org/fhir/StructureDefinition/questionnaire-hidden")) {
        defn(tbl, "Hidden Item", "http://hl7.org/fhir/StructureDefinition/questionnaire-displayCategory", "This item is a hidden question", null);
    }
    if (ToolingExtensions.readBoolExtension(qi, "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay")) {
        defn(tbl, "Hidden Item", "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-optionalDisplay", "This item is optional to display", null);
    }
    // formal definitions
    if (qi.hasDefinition()) {
        genDefinitionLink(defn(tbl, "Definition"), qi);
    }
    if (qi.hasCode()) {
        XhtmlNode tr = tbl.tr();
        tr.td().tx(Utilities.pluralize("Code", qi.getCode().size()));
        XhtmlNode ul = tr.td().ul();
        for (Coding c : qi.getCode()) {
            renderCodingWithDetails(ul.li(), c);
        }
    }
    if (qi.hasExtension("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod")) {
        XhtmlNode tr = tbl.tr();
        tr.td().ah("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod").tx("Observation Link Period");
        render(tr.td(), qi.getExtensionByUrl("http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationLinkPeriod").getValue());
    }
    // dynamic management
    if (qi.hasEnableWhen()) {
        XhtmlNode tr = tbl.tr();
        tr.td().tx("Enable When");
        td = tr.td();
        if (qi.getEnableWhen().size() == 1) {
            renderEnableWhen(td, qi.getEnableWhen().get(0));
        } else {
            td.tx(qi.getEnableBehavior().getDisplay() + " are true:");
            XhtmlNode ul = td.ul();
            for (QuestionnaireItemEnableWhenComponent ew : qi.getEnableWhen()) {
                renderEnableWhen(ul.li(), ew);
            }
        }
    }
    // other stuff
    List<QuestionnaireItemComponent> curr = new ArrayList<>();
    curr.addAll(parents);
    curr.add(qi);
    for (QuestionnaireItemComponent qic : qi.getItem()) {
        ext = renderDefinition(tbl, q, qic, curr) || ext;
    }
    return ext;
}
Also used : QuestionnaireItemComponent(org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemComponent) QuestionnaireItemAnswerOptionComponent(org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemAnswerOptionComponent) Coding(org.hl7.fhir.r4b.model.Coding) QuestionnaireItemInitialComponent(org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemInitialComponent) ArrayList(java.util.ArrayList) QuestionnaireItemEnableWhenComponent(org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemEnableWhenComponent) ValueSet(org.hl7.fhir.r4b.model.ValueSet) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Example 34 with Questionnaire

use of org.hl7.fhir.r5.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireRenderer method listOptions.

private void listOptions(Questionnaire q, QuestionnaireItemComponent i, XhtmlNode select) {
    if (i.hasAnswerValueSet()) {
        ValueSet vs = null;
        if (!Utilities.noString(i.getAnswerValueSet()) && i.getAnswerValueSet().startsWith("#")) {
            vs = (ValueSet) q.getContained(i.getAnswerValueSet().substring(1));
            if (vs != null && !vs.hasUrl()) {
                vs = vs.copy();
                vs.setUrl(q.getUrl() + "--" + q.getContained(i.getAnswerValueSet().substring(1)));
            }
        } else {
            vs = context.getContext().fetchResource(ValueSet.class, i.getAnswerValueSet());
        }
        if (vs != null) {
            ValueSetExpansionOutcome exp = context.getContext().expandVS(vs, true, false);
            if (exp.getValueset() != null) {
                for (ValueSetExpansionContainsComponent cc : exp.getValueset().getExpansion().getContains()) {
                    select.option(cc.getCode(), cc.hasDisplay() ? cc.getDisplay() : cc.getCode(), false);
                }
                return;
            }
        }
    } else if (i.hasAnswerOption()) {
        renderItemOptions(select, i);
    }
    select.option("a", "??", false);
}
Also used : ValueSetExpansionContainsComponent(org.hl7.fhir.r4b.model.ValueSet.ValueSetExpansionContainsComponent) ValueSetExpansionOutcome(org.hl7.fhir.r4b.terminologies.ValueSetExpander.ValueSetExpansionOutcome) ValueSet(org.hl7.fhir.r4b.model.ValueSet)

Example 35 with Questionnaire

use of org.hl7.fhir.r5.model.Questionnaire in project org.hl7.fhir.core by hapifhir.

the class QuestionnaireRenderer method renderDefns.

private boolean renderDefns(XhtmlNode x, Questionnaire q) throws IOException {
    XhtmlNode tbl = x.table("dict");
    boolean ext = false;
    ext = renderRootDefinition(tbl, q, new ArrayList<>()) || ext;
    for (QuestionnaireItemComponent qi : q.getItem()) {
        ext = renderDefinition(tbl, q, qi, new ArrayList<>()) || ext;
    }
    return ext;
}
Also used : QuestionnaireItemComponent(org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemComponent) XhtmlNode(org.hl7.fhir.utilities.xhtml.XhtmlNode)

Aggregations

XhtmlNode (org.hl7.fhir.utilities.xhtml.XhtmlNode)18 ArrayList (java.util.ArrayList)15 Questionnaire (org.hl7.fhir.r4.model.Questionnaire)14 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)13 QuestionnaireResponse (org.hl7.fhir.r4.model.QuestionnaireResponse)12 QuestionnaireItemComponent (org.hl7.fhir.r4b.model.Questionnaire.QuestionnaireItemComponent)11 QuestionnaireItemComponent (org.hl7.fhir.r5.model.Questionnaire.QuestionnaireItemComponent)11 File (java.io.File)10 TextFile (org.hl7.fhir.utilities.TextFile)10 Test (org.junit.jupiter.api.Test)10 FileOutputStream (java.io.FileOutputStream)9 Questionnaire (org.hl7.fhir.dstu3.model.Questionnaire)9 FHIRException (org.hl7.fhir.exceptions.FHIRException)8 QuestionnaireItemComponent (org.hl7.fhir.r4.model.Questionnaire.QuestionnaireItemComponent)8 IOException (java.io.IOException)7 Bundle (org.hl7.fhir.r4.model.Bundle)7 CanonicalType (org.hl7.fhir.r4.model.CanonicalType)7 ValueSet (org.hl7.fhir.r5.model.ValueSet)7 FileNotFoundException (java.io.FileNotFoundException)6 Extension (org.hl7.fhir.r4.model.Extension)6