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Example 1 with BundleValidationRule

use of org.hl7.fhir.r5.utils.validation.BundleValidationRule in project org.hl7.fhir.core by hapifhir.

the class Params method loadCliContext.

/**
 * TODO Don't do this all in one for loop. Use the above methods.
 */
public static CliContext loadCliContext(String[] args) throws Exception {
    CliContext cliContext = new CliContext();
    // load the parameters - so order doesn't matter
    for (int i = 0; i < args.length; i++) {
        if (args[i].equals(VERSION)) {
            cliContext.setSv(VersionUtilities.getCurrentPackageVersion(args[++i]));
        } else if (args[i].equals(OUTPUT)) {
            if (i + 1 == args.length)
                throw new Error("Specified -output without indicating output file");
            else
                cliContext.setOutput(args[++i]);
        } else if (args[i].equals(HTML_OUTPUT)) {
            if (i + 1 == args.length)
                throw new Error("Specified -html-output without indicating output file");
            else
                cliContext.setHtmlOutput(args[++i]);
        } else if (args[i].equals(PROXY)) {
            // ignore next parameter
            i++;
        } else if (args[i].equals(PROXY_AUTH)) {
            i++;
        } else if (args[i].equals(PROFILE)) {
            String p = null;
            if (i + 1 == args.length) {
                throw new Error("Specified -profile without indicating profile source");
            } else {
                p = args[++i];
                cliContext.addProfile(p);
            }
        } else if (args[i].equals(BUNDLE)) {
            String p = null;
            String r = null;
            if (i + 1 == args.length) {
                throw new Error("Specified -profile without indicating bundle rule ");
            } else {
                r = args[++i];
            }
            if (i + 1 == args.length) {
                throw new Error("Specified -profile without indicating profile source");
            } else {
                p = args[++i];
            }
            cliContext.getBundleValidationRules().add(new BundleValidationRule(r, p));
        } else if (args[i].equals(QUESTIONNAIRE)) {
            if (i + 1 == args.length)
                throw new Error("Specified -questionnaire without indicating questionnaire mode");
            else {
                String q = args[++i];
                cliContext.setQuestionnaireMode(QuestionnaireMode.fromCode(q));
            }
        } else if (args[i].equals(LEVEL)) {
            if (i + 1 == args.length)
                throw new Error("Specified -level without indicating level mode");
            else {
                String q = args[++i];
                cliContext.setLevel(ValidationLevel.fromCode(q));
            }
        } else if (args[i].equals(NATIVE)) {
            cliContext.setDoNative(true);
        } else if (args[i].equals(ASSUME_VALID_REST_REF)) {
            cliContext.setAssumeValidRestReferences(true);
        } else if (args[i].equals(DEBUG)) {
            cliContext.setDoDebug(true);
        } else if (args[i].equals(SCT)) {
            cliContext.setSnomedCT(args[++i]);
        } else if (args[i].equals(RECURSE)) {
            cliContext.setRecursive(true);
        } else if (args[i].equals(SHOW_MESSAGES_FROM_REFERENCES)) {
            cliContext.setShowMessagesFromReferences(true);
        } else if (args[i].equals(LOCALE)) {
            if (i + 1 == args.length) {
                throw new Error("Specified -locale without indicating locale");
            } else {
                cliContext.setLocale(new Locale(args[++i]));
            }
        } else if (args[i].equals(EXTENSIONS)) {
            cliContext.getExtensions().add(args[++i]);
        } else if (args[i].equals(NO_INTERNAL_CACHING)) {
            cliContext.setNoInternalCaching(true);
        } else if (args[i].equals(NO_EXTENSIBLE_BINDING_WARNINGS)) {
            cliContext.setNoExtensibleBindingMessages(true);
        } else if (args[i].equals(NO_UNICODE_BIDI_CONTROL_CHARS)) {
            cliContext.setNoUnicodeBiDiControlChars(true);
        } else if (args[i].equals(NO_INVARIANTS)) {
            cliContext.setNoInvariants(true);
        } else if (args[i].equals(WANT_INVARIANTS_IN_MESSAGES)) {
            cliContext.setWantInvariantsInMessages(true);
        } else if (args[i].equals(HINT_ABOUT_NON_MUST_SUPPORT)) {
            cliContext.setHintAboutNonMustSupport(true);
        } else if (args[i].equals(TO_VERSION)) {
            cliContext.setTargetVer(args[++i]);
            cliContext.setMode(EngineMode.VERSION);
        } else if (args[i].equals(DO_NATIVE)) {
            cliContext.setCanDoNative(true);
        } else if (args[i].equals(NO_NATIVE)) {
            cliContext.setCanDoNative(false);
        } else if (args[i].equals(TRANSFORM)) {
            cliContext.setMap(args[++i]);
            cliContext.setMode(EngineMode.TRANSFORM);
        } else if (args[i].equals(COMPILE)) {
            cliContext.setMap(args[++i]);
            cliContext.setMode(EngineMode.COMPILE);
        } else if (args[i].equals(NARRATIVE)) {
            cliContext.setMode(EngineMode.NARRATIVE);
        } else if (args[i].equals(SPREADSHEET)) {
            cliContext.setMode(EngineMode.SPREADSHEET);
        } else if (args[i].equals(SNAPSHOT)) {
            cliContext.setMode(EngineMode.SNAPSHOT);
        } else if (args[i].equals(SECURITY_CHECKS)) {
            cliContext.setSecurityChecks(true);
        } else if (args[i].equals(CRUMB_TRAIL)) {
            cliContext.setCrumbTrails(true);
        } else if (args[i].equals(VERBOSE)) {
            cliContext.setCrumbTrails(true);
        } else if (args[i].equals(ALLOW_EXAMPLE_URLS)) {
            String bl = args[++i];
            if ("true".equals(bl)) {
                cliContext.setAllowExampleUrls(true);
            } else if ("false".equals(bl)) {
                cliContext.setAllowExampleUrls(false);
            } else {
                throw new Error("Value for " + ALLOW_EXAMPLE_URLS + " not understood: " + bl);
            }
        } else if (args[i].equals(SHOW_TIMES)) {
            cliContext.setShowTimes(true);
        } else if (args[i].equals(OUTPUT_STYLE)) {
            cliContext.setOutputStyle(args[++i]);
        } else if (args[i].equals(SCAN)) {
            cliContext.setMode(EngineMode.SCAN);
        } else if (args[i].equals(TERMINOLOGY)) {
            if (i + 1 == args.length)
                throw new Error("Specified -tx without indicating terminology server");
            else
                cliContext.setTxServer("n/a".equals(args[++i]) ? null : args[i]);
        } else if (args[i].equals(TERMINOLOGY_LOG)) {
            if (i + 1 == args.length)
                throw new Error("Specified -txLog without indicating file");
            else
                cliContext.setTxLog(args[++i]);
        } else if (args[i].equals(TERMINOLOGY_CACHE)) {
            if (i + 1 == args.length)
                throw new Error("Specified -txCache without indicating file");
            else
                cliContext.setTxCache(args[++i]);
        } else if (args[i].equals(LOG)) {
            if (i + 1 == args.length)
                throw new Error("Specified -log without indicating file");
            else
                cliContext.setMapLog(args[++i]);
        } else if (args[i].equals(LANGUAGE)) {
            if (i + 1 == args.length)
                throw new Error("Specified -language without indicating language");
            else
                cliContext.setLang(args[++i]);
        } else if (args[i].equals(IMPLEMENTATION_GUIDE) || args[i].equals(DEFINITION)) {
            if (i + 1 == args.length)
                throw new Error("Specified " + args[i] + " without indicating ig file");
            else {
                String s = args[++i];
                String version = Common.getVersionFromIGName(null, s);
                if (version == null) {
                    cliContext.addIg(s);
                } else {
                    cliContext.setSv(version);
                }
            }
        } else if (args[i].equals(MAP)) {
            if (cliContext.getMap() == null) {
                if (i + 1 == args.length)
                    throw new Error("Specified -map without indicating map file");
                else
                    cliContext.setMap(args[++i]);
            } else {
                throw new Exception("Can only nominate a single -map parameter");
            }
        } else if (args[i].startsWith(X)) {
            i++;
        } else if (args[i].equals(CONVERT)) {
            cliContext.setMode(EngineMode.CONVERT);
        } else if (args[i].equals(FHIRPATH)) {
            cliContext.setMode(EngineMode.FHIRPATH);
            if (cliContext.getFhirpath() == null)
                if (i + 1 == args.length)
                    throw new Error("Specified -fhirpath without indicating a FHIRPath expression");
                else
                    cliContext.setFhirpath(args[++i]);
            else
                throw new Exception("Can only nominate a single -fhirpath parameter");
        } else {
            cliContext.addSource(args[i]);
        }
    }
    return cliContext;
}
Also used : Locale(java.util.Locale) BundleValidationRule(org.hl7.fhir.r5.utils.validation.BundleValidationRule) CliContext(org.hl7.fhir.validation.cli.model.CliContext)

Example 2 with BundleValidationRule

use of org.hl7.fhir.r5.utils.validation.BundleValidationRule in project org.hl7.fhir.core by hapifhir.

the class ValidationTests method test.

@SuppressWarnings("deprecation")
@Test
public void test() throws Exception {
    CacheVerificationLogger logger = new CacheVerificationLogger();
    long setup = System.nanoTime();
    this.name = name;
    System.out.println("---- " + name + " ----------------------------------------------------------------");
    System.out.println("** Core: ");
    String txLog = null;
    if (content.has("txLog")) {
        txLog = content.get("txLog").getAsString();
    }
    version = "5.0";
    List<ValidationMessage> messages = new ArrayList<ValidationMessage>();
    if (content.has("version")) {
        version = content.get("version").getAsString();
    }
    version = VersionUtilities.getMajMin(version);
    if (!ve.containsKey(version)) {
        if (version.startsWith("5.0"))
            ve.put(version, TestUtilities.getValidationEngine("hl7.fhir.r5.core#4.5.0", ValidationEngineTests.DEF_TX, txLog, FhirPublication.R5, true, "4.5.0"));
        else if (version.startsWith("4.3"))
            ve.put(version, TestUtilities.getValidationEngine("hl7.fhir.r4b.core#4.3.0", ValidationEngineTests.DEF_TX, txLog, FhirPublication.R4B, true, "4.3.0"));
        else if (version.startsWith("4.0"))
            ve.put(version, TestUtilities.getValidationEngine("hl7.fhir.r4.core#4.0.1", ValidationEngineTests.DEF_TX, txLog, FhirPublication.R4, true, "4.0.1"));
        else if (version.startsWith("3.0"))
            ve.put(version, TestUtilities.getValidationEngine("hl7.fhir.r3.core#3.0.2", ValidationEngineTests.DEF_TX, txLog, FhirPublication.STU3, true, "3.0.2"));
        else if (version.startsWith("1.4"))
            ve.put(version, TestUtilities.getValidationEngine("hl7.fhir.r2b.core#1.4.0", ValidationEngineTests.DEF_TX, txLog, FhirPublication.DSTU2016May, true, "1.4.0"));
        else if (version.startsWith("1.0"))
            ve.put(version, TestUtilities.getValidationEngine("hl7.fhir.r2.core#1.0.2", ValidationEngineTests.DEF_TX, txLog, FhirPublication.DSTU2, true, "1.0.2"));
        else
            throw new Exception("unknown version " + version);
    }
    vCurr = ve.get(version);
    vCurr.getContext().getTxClient().setLogger(logger);
    igLoader = new IgLoader(vCurr.getPcm(), vCurr.getContext(), vCurr.getVersion(), true);
    if (TestingUtilities.fcontexts == null) {
        TestingUtilities.fcontexts = new HashMap<>();
    }
    TestingUtilities.fcontexts.put(version, vCurr.getContext());
    if (content.has("use-test") && !content.get("use-test").getAsBoolean())
        return;
    byte[] testCaseContent = TestingUtilities.loadTestResource("validator", JSONUtil.str(content, "file")).getBytes(StandardCharsets.UTF_8);
    // load and process content
    FhirFormat fmt = determineFormat(content, testCaseContent);
    InstanceValidator val = vCurr.getValidator(fmt);
    val.setWantCheckSnapshotUnchanged(true);
    val.getContext().setClientRetryCount(4);
    val.setDebug(false);
    if (content.has("fetcher") && "standalone".equals(JSONUtil.str(content, "fetcher"))) {
        val.setFetcher(vCurr);
        vCurr.setFetcher(new StandAloneValidatorFetcher(vCurr.getPcm(), vCurr.getContext(), vCurr));
    } else {
        val.setFetcher(this);
    }
    val.setPolicyAdvisor(this);
    if (content.has("allowed-extension-domain"))
        val.getExtensionDomains().add(content.get("allowed-extension-domain").getAsString());
    if (content.has("allowed-extension-domains"))
        for (JsonElement a : content.getAsJsonArray("allowed-extension-domains")) val.getExtensionDomains().add(a.getAsString());
    if (content.has("language"))
        val.setValidationLanguage(content.get("language").getAsString());
    else
        val.setValidationLanguage(null);
    if (content.has("default-version")) {
        val.setBaseOptions(val.getBaseOptions().setVersionFlexible(content.get("default-version").getAsBoolean()));
    } else {
        val.setBaseOptions(val.getBaseOptions().setVersionFlexible(false));
    }
    if (content.has("packages")) {
        for (JsonElement e : content.getAsJsonArray("packages")) {
            String n = e.getAsString();
            InputStream cnt = n.endsWith(".tgz") ? TestingUtilities.loadTestResourceStream("validator", n) : null;
            if (cnt != null) {
                igLoader.loadPackage(NpmPackage.fromPackage(cnt));
            } else {
                igLoader.loadIg(vCurr.getIgs(), vCurr.getBinaries(), n, true);
            }
        }
    }
    if (content.has("crumb-trail")) {
        val.setCrumbTrails(content.get("crumb-trail").getAsBoolean());
    }
    if (content.has("supporting")) {
        for (JsonElement e : content.getAsJsonArray("supporting")) {
            String filename = e.getAsString();
            String contents = TestingUtilities.loadTestResource("validator", filename);
            CanonicalResource mr = (CanonicalResource) loadResource(filename, contents);
            val.getContext().cacheResource(mr);
            if (mr instanceof ImplementationGuide) {
                val.getImplementationGuides().add((ImplementationGuide) mr);
            }
        }
    }
    val.getBundleValidationRules().clear();
    if (content.has("bundle-param")) {
        val.getBundleValidationRules().add(new BundleValidationRule(content.getAsJsonObject("bundle-param").get("rule").getAsString(), content.getAsJsonObject("bundle-param").get("profile").getAsString()));
    }
    if (content.has("profiles")) {
        for (JsonElement je : content.getAsJsonArray("profiles")) {
            String filename = je.getAsString();
            String contents = TestingUtilities.loadTestResource("validator", filename);
            StructureDefinition sd = loadProfile(filename, contents, messages, val.isDebug());
            val.getContext().cacheResource(sd);
        }
    }
    List<ValidationMessage> errors = new ArrayList<ValidationMessage>();
    if (content.getAsJsonObject("java").has("debug")) {
        val.setDebug(content.getAsJsonObject("java").get("debug").getAsBoolean());
    } else {
        val.setDebug(false);
    }
    if (content.has("best-practice")) {
        val.setBestPracticeWarningLevel(BestPracticeWarningLevel.valueOf(content.get("best-practice").getAsString()));
    }
    if (content.has("examples")) {
        val.setAllowExamples(content.get("examples").getAsBoolean());
    } else {
        val.setAllowExamples(true);
    }
    if (content.has("security-checks")) {
        val.setSecurityChecks(content.get("security-checks").getAsBoolean());
    }
    if (content.has("logical") == false) {
        val.setAssumeValidRestReferences(content.has("assumeValidRestReferences") ? content.get("assumeValidRestReferences").getAsBoolean() : false);
        System.out.println(String.format("Start Validating (%d to set up)", (System.nanoTime() - setup) / 1000000));
        val.validate(null, errors, new ByteArrayInputStream(testCaseContent), fmt);
        System.out.println(val.reportTimes());
        checkOutcomes(errors, content, null, name);
    }
    if (content.has("profile")) {
        System.out.print("** Profile: ");
        JsonObject profile = content.getAsJsonObject("profile");
        if (profile.has("packages")) {
            for (JsonElement e : profile.getAsJsonArray("packages")) {
                igLoader.loadIg(vCurr.getIgs(), vCurr.getBinaries(), e.getAsString(), true);
            }
        }
        if (profile.getAsJsonObject("java").has("debug")) {
            val.setDebug(profile.getAsJsonObject("java").get("debug").getAsBoolean());
        }
        if (profile.has("supporting")) {
            for (JsonElement e : profile.getAsJsonArray("supporting")) {
                String filename = e.getAsString();
                String contents = TestingUtilities.loadTestResource("validator", filename);
                CanonicalResource mr = (CanonicalResource) loadResource(filename, contents);
                val.getContext().cacheResource(mr);
                if (mr instanceof ImplementationGuide) {
                    val.getImplementationGuides().add((ImplementationGuide) mr);
                }
            }
        }
        StructureDefinition sd = null;
        String filename = profile.get("source").getAsString();
        if (Utilities.isAbsoluteUrl(filename)) {
            sd = val.getContext().fetchResource(StructureDefinition.class, filename);
        } else {
            String contents = TestingUtilities.loadTestResource("validator", filename);
            System.out.println("Name: " + name + " - profile : " + profile.get("source").getAsString());
            version = content.has("version") ? content.get("version").getAsString() : Constants.VERSION;
            sd = loadProfile(filename, contents, messages, val.isDebug());
            val.getContext().cacheResource(sd);
        }
        val.setAssumeValidRestReferences(profile.has("assumeValidRestReferences") ? profile.get("assumeValidRestReferences").getAsBoolean() : false);
        List<ValidationMessage> errorsProfile = new ArrayList<ValidationMessage>();
        val.validate(null, errorsProfile, new ByteArrayInputStream(testCaseContent), fmt, asSdList(sd));
        System.out.println(val.reportTimes());
        checkOutcomes(errorsProfile, profile, filename, name);
    }
    if (content.has("logical")) {
        System.out.print("** Logical: ");
        JsonObject logical = content.getAsJsonObject("logical");
        if (logical.has("supporting")) {
            for (JsonElement e : logical.getAsJsonArray("supporting")) {
                String filename = e.getAsString();
                String contents = TestingUtilities.loadTestResource("validator", filename);
                CanonicalResource mr = (CanonicalResource) loadResource(filename, contents);
                if (mr instanceof StructureDefinition) {
                    val.getContext().generateSnapshot((StructureDefinition) mr, true);
                }
                val.getContext().cacheResource(mr);
            }
        }
        if (logical.has("packages")) {
            for (JsonElement e : logical.getAsJsonArray("packages")) {
                igLoader.loadIg(vCurr.getIgs(), vCurr.getBinaries(), e.getAsString(), true);
            }
        }
        List<ValidationMessage> errorsLogical = new ArrayList<ValidationMessage>();
        Element le = val.validate(null, errorsLogical, new ByteArrayInputStream(testCaseContent), fmt);
        if (logical.has("expressions")) {
            FHIRPathEngine fp = new FHIRPathEngine(val.getContext());
            for (JsonElement e : logical.getAsJsonArray("expressions")) {
                String exp = e.getAsString();
                Assert.assertTrue(fp.evaluateToBoolean(null, le, le, le, fp.parse(exp)));
            }
        }
        checkOutcomes(errorsLogical, logical, "logical", name);
    }
    logger.verifyHasNoRequests();
}
Also used : IgLoader(org.hl7.fhir.validation.IgLoader) BundleValidationRule(org.hl7.fhir.r5.utils.validation.BundleValidationRule) InstanceValidator(org.hl7.fhir.validation.instance.InstanceValidator) ValidationMessage(org.hl7.fhir.utilities.validation.ValidationMessage) ImplementationGuide(org.hl7.fhir.r5.model.ImplementationGuide) FHIRPathEngine(org.hl7.fhir.r5.utils.FHIRPathEngine) ByteArrayInputStream(java.io.ByteArrayInputStream) InputStream(java.io.InputStream) JsonElement(com.google.gson.JsonElement) Element(org.hl7.fhir.r5.elementmodel.Element) ArrayList(java.util.ArrayList) JsonObject(com.google.gson.JsonObject) FhirFormat(org.hl7.fhir.r5.elementmodel.Manager.FhirFormat) FileNotFoundException(java.io.FileNotFoundException) NotImplementedException(org.apache.commons.lang3.NotImplementedException) DefinitionException(org.hl7.fhir.exceptions.DefinitionException) PathEngineException(org.hl7.fhir.exceptions.PathEngineException) MalformedURLException(java.net.MalformedURLException) IOException(java.io.IOException) FHIRException(org.hl7.fhir.exceptions.FHIRException) StructureDefinition(org.hl7.fhir.r5.model.StructureDefinition) ByteArrayInputStream(java.io.ByteArrayInputStream) CacheVerificationLogger(org.hl7.fhir.utilities.tests.CacheVerificationLogger) JsonElement(com.google.gson.JsonElement) CanonicalResource(org.hl7.fhir.r5.model.CanonicalResource) StandAloneValidatorFetcher(org.hl7.fhir.validation.cli.services.StandAloneValidatorFetcher) Test(org.junit.Test)

Example 3 with BundleValidationRule

use of org.hl7.fhir.r5.utils.validation.BundleValidationRule in project org.hl7.fhir.core by hapifhir.

the class BundleValidator method validateBundle.

public void validateBundle(List<ValidationMessage> errors, Element bundle, NodeStack stack, boolean checkSpecials, ValidatorHostContext hostContext) {
    List<Element> entries = new ArrayList<Element>();
    bundle.getNamedChildren(ENTRY, entries);
    String type = bundle.getNamedChildValue(TYPE);
    type = StringUtils.defaultString(type);
    if (entries.size() == 0) {
        rule(errors, IssueType.INVALID, stack.getLiteralPath(), !(type.equals(DOCUMENT) || type.equals(MESSAGE)), I18nConstants.BUNDLE_BUNDLE_ENTRY_NOFIRST);
    } else {
        // Get the first entry, the MessageHeader
        Element firstEntry = entries.get(0);
        // Get the stack of the first entry
        NodeStack firstStack = stack.push(firstEntry, 1, null, null);
        String fullUrl = firstEntry.getNamedChildValue(FULL_URL);
        if (type.equals(DOCUMENT)) {
            Element resource = firstEntry.getNamedChild(RESOURCE);
            if (rule(errors, IssueType.INVALID, firstEntry.line(), firstEntry.col(), stack.addToLiteralPath(ENTRY, PATH_ARG), resource != null, I18nConstants.BUNDLE_BUNDLE_ENTRY_NOFIRSTRESOURCE)) {
                String id = resource.getNamedChildValue(ID);
                validateDocument(errors, entries, resource, firstStack.push(resource, -1, null, null), fullUrl, id);
            }
            if (!VersionUtilities.isThisOrLater(FHIRVersion._4_0_1.getDisplay(), bundle.getProperty().getStructure().getFhirVersion().getDisplay())) {
                handleSpecialCaseForLastUpdated(bundle, errors, stack);
            }
            checkAllInterlinked(errors, entries, stack, bundle, true);
        }
        if (type.equals(MESSAGE)) {
            Element resource = firstEntry.getNamedChild(RESOURCE);
            String id = resource.getNamedChildValue(ID);
            if (rule(errors, IssueType.INVALID, firstEntry.line(), firstEntry.col(), stack.addToLiteralPath(ENTRY, PATH_ARG), resource != null, I18nConstants.BUNDLE_BUNDLE_ENTRY_NOFIRSTRESOURCE)) {
                validateMessage(errors, entries, resource, firstStack.push(resource, -1, null, null), fullUrl, id);
            }
            checkAllInterlinked(errors, entries, stack, bundle, VersionUtilities.isR5Ver(context.getVersion()));
        }
        if (type.equals(SEARCHSET)) {
            checkSearchSet(errors, bundle, entries, stack);
        }
    // We do not yet have rules requiring that the id and fullUrl match when dealing with messaging Bundles
    // validateResourceIds(errors, entries, stack);
    }
    int count = 0;
    Map<String, Integer> counter = new HashMap<>();
    boolean fullUrlOptional = Utilities.existsInList(type, "transaction", "transaction-response", "batch", "batch-response");
    for (Element entry : entries) {
        NodeStack estack = stack.push(entry, count, null, null);
        String fullUrl = entry.getNamedChildValue(FULL_URL);
        String url = getCanonicalURLForEntry(entry);
        String id = getIdForEntry(entry);
        if (url != null) {
            if (!(!url.equals(fullUrl) || (url.matches(uriRegexForVersion()) && url.endsWith("/" + id))) && !isV3orV2Url(url))
                rule(errors, IssueType.INVALID, entry.line(), entry.col(), stack.addToLiteralPath(ENTRY, PATH_ARG), false, I18nConstants.BUNDLE_BUNDLE_ENTRY_MISMATCHIDURL, url, fullUrl, id);
            rule(errors, IssueType.INVALID, entry.line(), entry.col(), stack.addToLiteralPath(ENTRY, PATH_ARG), !url.equals(fullUrl) || serverBase == null || (url.equals(Utilities.pathURL(serverBase, entry.getNamedChild(RESOURCE).fhirType(), id))), I18nConstants.BUNDLE_BUNDLE_ENTRY_CANONICAL, url, fullUrl);
        }
        if (!VersionUtilities.isR2Ver(context.getVersion())) {
            rule(errors, IssueType.INVALID, entry.line(), entry.col(), estack.getLiteralPath(), fullUrlOptional || fullUrl != null, I18nConstants.BUNDLE_BUNDLE_ENTRY_FULLURL_REQUIRED);
        }
        // check bundle profile requests
        if (entry.hasChild(RESOURCE)) {
            String rtype = entry.getNamedChild(RESOURCE).fhirType();
            int rcount = counter.containsKey(rtype) ? counter.get(rtype) + 1 : 0;
            counter.put(rtype, rcount);
            for (BundleValidationRule bvr : validator.getBundleValidationRules()) {
                if (meetsRule(bvr, rtype, rcount, count)) {
                    StructureDefinition defn = validator.getContext().fetchResource(StructureDefinition.class, bvr.getProfile());
                    if (defn == null) {
                        throw new Error(validator.getContext().formatMessage(I18nConstants.BUNDLE_RULE_PROFILE_UNKNOWN, bvr.getRule(), bvr.getProfile()));
                    } else {
                        Element res = entry.getNamedChild(RESOURCE);
                        NodeStack rstack = estack.push(res, -1, null, null);
                        if (validator.isCrumbTrails()) {
                            res.addMessage(signpost(errors, IssueType.INFORMATIONAL, res.line(), res.col(), stack.getLiteralPath(), I18nConstants.VALIDATION_VAL_PROFILE_SIGNPOST_BUNDLE_PARAM, defn.getUrl()));
                        }
                        stack.resetIds();
                        validator.startInner(hostContext, errors, res, res, defn, rstack, false);
                    }
                }
            }
        }
        // todo: check specials
        count++;
    }
}
Also used : BundleValidationRule(org.hl7.fhir.r5.utils.validation.BundleValidationRule) HashMap(java.util.HashMap) IndexedElement(org.hl7.fhir.validation.instance.utils.IndexedElement) Element(org.hl7.fhir.r5.elementmodel.Element) ArrayList(java.util.ArrayList) NodeStack(org.hl7.fhir.validation.instance.utils.NodeStack) StructureDefinition(org.hl7.fhir.r5.model.StructureDefinition)

Aggregations

BundleValidationRule (org.hl7.fhir.r5.utils.validation.BundleValidationRule)3 ArrayList (java.util.ArrayList)2 Element (org.hl7.fhir.r5.elementmodel.Element)2 StructureDefinition (org.hl7.fhir.r5.model.StructureDefinition)2 JsonElement (com.google.gson.JsonElement)1 JsonObject (com.google.gson.JsonObject)1 ByteArrayInputStream (java.io.ByteArrayInputStream)1 FileNotFoundException (java.io.FileNotFoundException)1 IOException (java.io.IOException)1 InputStream (java.io.InputStream)1 MalformedURLException (java.net.MalformedURLException)1 HashMap (java.util.HashMap)1 Locale (java.util.Locale)1 NotImplementedException (org.apache.commons.lang3.NotImplementedException)1 DefinitionException (org.hl7.fhir.exceptions.DefinitionException)1 FHIRException (org.hl7.fhir.exceptions.FHIRException)1 PathEngineException (org.hl7.fhir.exceptions.PathEngineException)1 FhirFormat (org.hl7.fhir.r5.elementmodel.Manager.FhirFormat)1 CanonicalResource (org.hl7.fhir.r5.model.CanonicalResource)1 ImplementationGuide (org.hl7.fhir.r5.model.ImplementationGuide)1