use of org.hl7.fhir.utilities.graphql.Argument in project org.hl7.fhir.core by hapifhir.
the class GraphQLEngineTests method testResource.
private void testResource(Resource resource, String output, String source, String operation) throws IOException, EGraphEngine, EGraphQLException {
GraphQLEngine gql = new GraphQLEngine(TestingUtilities.getSharedWorkerContext());
gql.setServices(this);
if (resource != null)
gql.setFocus(resource);
gql.setGraphQL(Parser.parse(TestingUtilities.loadTestResource("r5", "graphql", source)));
gql.getGraphQL().setOperationName(operation);
gql.getGraphQL().getVariables().add(new Argument("var", new NameValue("true")));
boolean ok = false;
String msg = null;
try {
gql.execute();
ok = true;
} catch (Exception e) {
if (!output.equals("$error"))
e.printStackTrace();
ok = false;
msg = e.getMessage();
}
if (ok) {
Assertions.assertTrue(!output.equals("$error"), "Expected to fail, but didn't");
StringBuilder str = new StringBuilder();
gql.getOutput().setWriteWrapper(false);
gql.getOutput().write(str, 0);
IOUtils.copy(CompareUtilities.loadTestResourceStream("r5", "graphql", source), new FileOutputStream(CompareUtilities.tempFile("graphql", source)));
IOUtils.copy(CompareUtilities.loadTestResourceStream("r5", "graphql", output), new FileOutputStream(CompareUtilities.tempFile("graphql", output)));
TextFile.stringToFile(str.toString(), CompareUtilities.tempFile("graphql", output + ".out"));
msg = CompareUtilities.checkJsonIsSame(CompareUtilities.tempFile("graphql", output), CompareUtilities.tempFile("graphql", output + ".out"));
Assertions.assertTrue(Utilities.noString(msg), msg);
} else
Assertions.assertTrue(output.equals("$error"), "Error, but proper output was expected (" + msg + ")");
}
use of org.hl7.fhir.utilities.graphql.Argument in project org.hl7.fhir.core by hapifhir.
the class GraphQLEngineTests method search.
@Override
public Bundle search(Object appInfo, String type, List<Argument> searchParams) throws FHIRException {
try {
Bundle bnd = new Bundle();
BundleLinkComponent bl = bnd.addLink();
bl.setRelation("next");
bl.setUrl("http://test.fhir.org/r4/Patient?_format=text/xhtml&search-id=77c97e03-8a6c-415f-a63d-11c80cf73f&&active=true&_sort=_id&search-offset=50&_count=50");
bl = bnd.addLink();
bl.setRelation("self");
bl.setUrl("http://test.fhir.org/r4/Patient?_format=text/xhtml&search-id=77c97e03-8a6c-415f-a63d-11c80cf73f&&active=true&_sort=_id&search-offset=0&_count=50");
BundleEntryComponent be = bnd.addEntry();
be.setFullUrl("http://hl7.org/fhir/Patient/example");
be.setResource(new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "patient-example.xml")));
be = bnd.addEntry();
be.setFullUrl("http://hl7.org/fhir/Patient/example");
be.setResource(new XmlParser().parse(TestingUtilities.loadTestResourceStream("r5", "patient-example-xds.xml")));
be.getSearch().setScore(0.5);
be.getSearch().setMode(SearchEntryMode.MATCH);
bnd.setTotal(50);
return bnd;
} catch (Exception e) {
throw new FHIRException(e);
}
}
use of org.hl7.fhir.utilities.graphql.Argument in project org.hl7.fhir.core by hapifhir.
the class GraphQLEngine method processValues.
private void processValues(Resource context, Selection sel, Property prop, ObjectValue target, List<Base> values, boolean extensionMode, boolean inheritedList, String suffix) throws EGraphQLException, FHIRException {
boolean il = false;
Argument arg = null;
ExpressionNode expression = null;
if (sel.getField().hasDirective("slice")) {
Directive dir = sel.getField().directive("slice");
String s = ((StringValue) dir.getArguments().get(0).getValues().get(0)).getValue();
if (s.equals("$index"))
expression = magicExpression;
else
expression = fpe.parse(s);
}
if (// special: instruction to drop this node...
sel.getField().hasDirective("flatten"))
il = prop.isList() && !sel.getField().hasDirective("first");
else if (sel.getField().hasDirective("first")) {
if (expression != null)
throw new FHIRException("You cannot mix @slice and @first");
arg = target.addField(sel.getField().getAlias() + suffix, listStatus(sel.getField(), inheritedList));
} else if (expression == null)
arg = target.addField(sel.getField().getAlias() + suffix, listStatus(sel.getField(), prop.isList() || inheritedList));
int index = 0;
for (Base value : values) {
String ss = "";
if (expression != null) {
if (expression == magicExpression)
ss = suffix + '.' + Integer.toString(index);
else
ss = suffix + '.' + fpe.evaluateToString(null, null, null, value, expression);
if (!sel.getField().hasDirective("flatten"))
arg = target.addField(sel.getField().getAlias() + suffix, listStatus(sel.getField(), prop.isList() || inheritedList));
}
if (value.isPrimitive() && !extensionMode) {
if (!sel.getField().getSelectionSet().isEmpty())
throw new EGraphQLException("Encountered a selection set on a scalar field type");
processPrimitive(arg, value);
} else {
if (sel.getField().getSelectionSet().isEmpty())
throw new EGraphQLException("No Fields selected on a complex object");
if (arg == null)
processObject(context, value, target, sel.getField().getSelectionSet(), il, ss);
else {
ObjectValue n = new ObjectValue();
arg.addValue(n);
processObject(context, value, n, sel.getField().getSelectionSet(), il, ss);
}
}
if (sel.getField().hasDirective("first"))
return;
index++;
}
}
use of org.hl7.fhir.utilities.graphql.Argument in project org.hl7.fhir.core by hapifhir.
the class GraphQLEngine method processReference.
private void processReference(Resource context, Base source, Field field, ObjectValue target, boolean inheritedList, String suffix) throws EGraphQLException, FHIRException {
if (!(source instanceof Reference))
throw new EGraphQLException("Not done yet");
if (services == null)
throw new EGraphQLException("Resource Referencing services not provided");
Reference ref = (Reference) source;
ReferenceResolution res = services.lookup(appInfo, context, ref);
if (res != null) {
if (targetTypeOk(field.getArguments(), res.getTarget())) {
Argument arg = target.addField(field.getAlias() + suffix, listStatus(field, inheritedList));
ObjectValue obj = new ObjectValue();
arg.addValue(obj);
processObject((Resource) res.getTargetContext(), (Base) res.getTarget(), obj, field.getSelectionSet(), inheritedList, suffix);
}
} else if (!hasArgument(field.getArguments(), "optional", "true"))
throw new EGraphQLException("Unable to resolve reference to " + ref.getReference());
}
use of org.hl7.fhir.utilities.graphql.Argument in project org.hl7.fhir.core by hapifhir.
the class GraphQLEngine method filter.
private List<Base> filter(Resource context, Property prop, String fieldName, List<Argument> arguments, List<Base> values, boolean extensionMode) throws FHIRException, EGraphQLException {
List<Base> result = new ArrayList<Base>();
if (values.size() > 0) {
int count = Integer.MAX_VALUE;
int offset = 0;
StringBuilder fp = new StringBuilder();
for (Argument arg : arguments) {
List<Value> vl = resolveValues(arg);
if ((vl.size() != 1))
throw new EGraphQLException("Incorrect number of arguments");
if (values.get(0).isPrimitive())
throw new EGraphQLException("Attempt to use a filter (" + arg.getName() + ") on a primtive type (" + prop.getTypeCode() + ")");
if ((arg.getName().equals("fhirpath")))
fp.append(" and " + vl.get(0).toString());
else if ((arg.getName().equals("_count")))
count = Integer.valueOf(vl.get(0).toString());
else if ((arg.getName().equals("_offset")))
offset = Integer.valueOf(vl.get(0).toString());
else {
Property p = values.get(0).getNamedProperty(arg.getName());
if (p == null)
throw new EGraphQLException("Attempt to use an unknown filter (" + arg.getName() + ") on a type (" + prop.getTypeCode() + ")");
fp.append(" and " + arg.getName() + " = '" + vl.get(0).toString() + "'");
}
}
// Account for situations where the GraphQL expression selected e.g.
// effectiveDateTime but the field contains effectivePeriod
String propName = prop.getName();
List<Base> newValues = new ArrayList<>(values.size());
for (Base value : values) {
if (propName.endsWith("[x]")) {
String propNameShortened = propName.substring(0, propName.length() - 3);
if (fieldName.startsWith(propNameShortened) && fieldName.length() > propNameShortened.length()) {
if (!value.fhirType().equalsIgnoreCase(fieldName.substring(propNameShortened.length()))) {
continue;
}
}
}
newValues.add(value);
}
int i = 0;
int t = 0;
if (fp.length() == 0)
for (Base v : newValues) {
if ((i >= offset) && passesExtensionMode(v, extensionMode)) {
result.add(v);
t++;
if (t >= count)
break;
}
i++;
}
else {
ExpressionNode node = fpe.parse(fp.substring(5));
for (Base v : newValues) {
if ((i >= offset) && passesExtensionMode(v, extensionMode) && fpe.evaluateToBoolean(null, context, v, node)) {
result.add(v);
t++;
if (t >= count)
break;
}
i++;
}
}
}
return result;
}
Aggregations