Examples with Package org.hl7.fhir.utilities.graphql.Package used on opensource projects

Example 81 with Package

use of org.hl7.fhir.utilities.graphql.Package in project org.hl7.fhir.core by hapifhir.

the class NpmPackage method loadFiles.

public void loadFiles(String path, File source, String... exemptions) throws FileNotFoundException, IOException {
    this.npm = (JsonObject) new com.google.gson.JsonParser().parse(TextFile.fileToString(Utilities.path(path, "package", "package.json")));
    this.path = path;
    File dir = new File(path);
    for (File f : dir.listFiles()) {
        if (!isInternalExemptFile(f) && !Utilities.existsInList(f.getName(), exemptions)) {
            if (f.isDirectory()) {
                String d = f.getName();
                if (!d.equals("package")) {
                    d = Utilities.path("package", d);
                }
                NpmPackageFolder folder = this.new NpmPackageFolder(d);
                folder.folder = f;
                this.folders.put(d, folder);
                File ij = new File(Utilities.path(f.getAbsolutePath(), ".index.json"));
                if (ij.exists()) {
                    try {
                        if (!folder.readIndex(JsonTrackingParser.parseJson(ij))) {
                            indexFolder(folder.getName(), folder);
                        }
                    } catch (Exception e) {
                        throw new IOException("Error parsing " + ij.getAbsolutePath() + ": " + e.getMessage(), e);
                    }
                }
                loadSubFolders(dir.getAbsolutePath(), f);
            } else {
                NpmPackageFolder folder = this.new NpmPackageFolder(Utilities.path("package", "$root"));
                folder.folder = dir;
                this.folders.put(Utilities.path("package", "$root"), folder);
            }
        }
    }
}

Example 82 with Package

use of org.hl7.fhir.utilities.graphql.Package in project org.hl7.fhir.core by hapifhir.

the class NpmPackage method save.

public void save(File directory) throws IOException {
    File dir = new File(Utilities.path(directory.getAbsolutePath(), name()));
    if (!dir.exists()) {
        Utilities.createDirectory(dir.getAbsolutePath());
    } else {
        Utilities.clearDirectory(dir.getAbsolutePath());
    }
    for (NpmPackageFolder folder : folders.values()) {
        String n = folder.name;
        File pd = new File(Utilities.path(dir.getAbsolutePath(), n));
        if (!pd.exists()) {
            Utilities.createDirectory(pd.getAbsolutePath());
        }
        NpmPackageIndexBuilder indexer = new NpmPackageIndexBuilder();
        indexer.start();
        for (String s : folder.content.keySet()) {
            byte[] b = folder.content.get(s);
            indexer.seeFile(s, b);
            if (!s.equals(".index.json") && !s.equals("package.json")) {
                TextFile.bytesToFile(b, Utilities.path(dir.getAbsolutePath(), n, s));
            }
        }
        byte[] cnt = indexer.build().getBytes(StandardCharsets.UTF_8);
        TextFile.bytesToFile(cnt, Utilities.path(dir.getAbsolutePath(), n, ".index.json"));
    }
    byte[] cnt = TextFile.stringToBytes(new GsonBuilder().setPrettyPrinting().create().toJson(npm), false);
    TextFile.bytesToFile(cnt, Utilities.path(dir.getAbsolutePath(), "package", "package.json"));
}

Example 83 with Package

use of org.hl7.fhir.utilities.graphql.Package in project org.hl7.fhir.core by hapifhir.

the class NpmPackage method fromZip.

public static NpmPackage fromZip(InputStream stream, boolean dropRootFolder, String desc) throws IOException {
    NpmPackage res = new NpmPackage();
    ZipInputStream zip = new ZipInputStream(stream);
    ZipEntry ze;
    while ((ze = zip.getNextEntry()) != null) {
        int size;
        byte[] buffer = new byte[2048];
        ByteArrayOutputStream bytes = new ByteArrayOutputStream();
        BufferedOutputStream bos = new BufferedOutputStream(bytes, buffer.length);
        while ((size = zip.read(buffer, 0, buffer.length)) != -1) {
            bos.write(buffer, 0, size);
        }
        bos.flush();
        bos.close();
        if (bytes.size() > 0) {
            if (dropRootFolder) {
                res.loadFile(ze.getName().substring(ze.getName().indexOf("/") + 1), bytes.toByteArray());
            } else {
                res.loadFile(ze.getName(), bytes.toByteArray());
            }
        }
        zip.closeEntry();
    }
    zip.close();
    try {
        res.npm = JsonTrackingParser.parseJson(res.folders.get("package").fetchFile("package.json"));
    } catch (Exception e) {
        throw new IOException("Error parsing " + (desc == null ? "" : desc + "#") + "package/package.json: " + e.getMessage(), e);
    }
    res.checkIndexed(desc);
    return res;
}

Example 84 with Package

use of org.hl7.fhir.utilities.graphql.Package in project org.hl7.fhir.core by hapifhir.

the class PackageHacker method edit.

private void edit(String name) throws FileNotFoundException, IOException {
    File f = new File(name);
    if (!f.exists())
        throw new Error("Unable to find " + f.getAbsolutePath());
    NpmPackage pck = NpmPackage.fromPackage(new FileInputStream(f));
    System.out.println("Altering Package " + f.getAbsolutePath());
    System.out.println(nice(pck.getNpm()));
    change(pck.getNpm(), pck.getFolders().get("package").getContent());
    System.out.println("Revised Package");
    System.out.println("=======================");
    System.out.println(nice(pck.getNpm()));
    System.out.println("=======================");
    System.out.print("save? y/n: ");
    int r = System.in.read();
    if (r == 'y') {
        f.renameTo(new File(Utilities.changeFileExt(name, ".tgz.bak")));
        pck.save(new FileOutputStream(f));
    }
}

Example 85 with Package

use of org.hl7.fhir.utilities.graphql.Package in project org.hl7.fhir.core by hapifhir.

the class BaseTestingUtilities method loadTestResource.

public static String loadTestResource(String... paths) throws IOException {
    /**
     * This 'if' condition checks to see if the fhir-test-cases project (https://github.com/FHIR/fhir-test-cases) is
     * installed locally at the same directory level as the core library project is. If so, the test case data is read
     * directly from that project, instead of the imported maven dependency jar. It is important, that if you want to
     * test against the dependency imported from sonatype nexus, instead of your local copy, you need to either change
     * the name of the project directory to something other than 'fhir-test-cases', or move it to another location, not
     * at the same directory level as the core project.
     */
    String dir = System.getenv("FHIR-TEST-CASES");
    if (dir == null && ToolGlobalSettings.hasTestsPath()) {
        dir = ToolGlobalSettings.getTestsPath();
    }
    if (dir != null && new CSFile(dir).exists()) {
        String n = Utilities.path(dir, Utilities.path(paths));
        // ok, we'll resolve this locally
        return TextFile.fileToString(new CSFile(n));
    } else {
        // resolve from the package
        String contents;
        String classpath = ("/org/hl7/fhir/testcases/" + Utilities.pathURL(paths));
        try (InputStream inputStream = BaseTestingUtilities.class.getResourceAsStream(classpath)) {
            if (inputStream == null) {
                throw new IOException("Can't find file on classpath: " + classpath);
            }
            contents = IOUtils.toString(inputStream, java.nio.charset.StandardCharsets.UTF_8);
        }
        return contents;
    }
}