Examples with Section org.hl7.fhir.utilities.turtle.Turtle.Section used on opensource projects

Example 76 with Section

use of org.hl7.fhir.utilities.turtle.Turtle.Section in project org.hl7.fhir.core by hapifhir.

the class BundleRenderer method renderDocument.

private boolean renderDocument(XhtmlNode x, Bundle b) throws UnsupportedEncodingException, FHIRException, IOException, EOperationOutcome {
    // from the spec:
    // 
    // When the document is presented for human consumption, applications SHOULD present the collated narrative portions in order:
    // * The subject resource Narrative
    // * The Composition resource Narrative
    // * The section.text Narratives
    Composition comp = (Composition) b.getEntry().get(0).getResource();
    Resource subject = resolveReference(b, comp.getSubject());
    if (subject != null) {
        XhtmlNode nx = (subject instanceof DomainResource) ? ((DomainResource) subject).getText().getDiv() : null;
        if (nx != null) {
            x.addChildren(nx);
        } else {
            RendererFactory.factory(subject, context).render(x, subject);
        }
    }
    x.hr();
    if (comp.getText().hasDiv()) {
        x.addChildren(comp.getText().getDiv());
        x.hr();
    }
    for (SectionComponent section : comp.getSection()) {
        addSection(x, section, 2, false);
    }
    return false;
}

Example 77 with Section

use of org.hl7.fhir.utilities.turtle.Turtle.Section in project org.hl7.fhir.core by hapifhir.

the class Turtle method section.

public Section section(String sn) {
    if (hasSection(sn))
        throw new Error("Duplicate section name " + sn);
    Section s = new Section();
    s.name = sn;
    sections.add(s);
    return s;
}

Example 78 with Section

use of org.hl7.fhir.utilities.turtle.Turtle.Section in project org.hl7.fhir.core by hapifhir.

the class TurtleParser method compose.

public void compose(Element e, Turtle ttl, String base) throws FHIRException {
    ttl.prefix("fhir", FHIR_URI_BASE);
    ttl.prefix("rdfs", "http://www.w3.org/2000/01/rdf-schema#");
    ttl.prefix("owl", "http://www.w3.org/2002/07/owl#");
    ttl.prefix("xsd", "http://www.w3.org/2001/XMLSchema#");
    Section section = ttl.section("resource");
    String subjId = genSubjectId(e);
    String ontologyId = subjId.replace(">", ".ttl>");
    Section ontology = ttl.section("ontology header");
    ontology.triple(ontologyId, "a", "owl:Ontology");
    ontology.triple(ontologyId, "owl:imports", "fhir:fhir.ttl");
    if (ontologyId.startsWith("<" + FHIR_URI_BASE))
        ontology.triple(ontologyId, "owl:versionIRI", ontologyId.replace(FHIR_URI_BASE, FHIR_VERSION_BASE));
    Subject subject = section.triple(subjId, "a", "fhir:" + e.getType());
    subject.linkedPredicate("fhir:nodeRole", "fhir:treeRoot", linkResolver == null ? null : linkResolver.resolvePage("rdf.html#tree-root"));
    for (Element child : e.getChildren()) {
        composeElement(section, subject, child, null);
    }
}

Example 79 with Section

use of org.hl7.fhir.utilities.turtle.Turtle.Section in project org.hl7.fhir.core by hapifhir.

the class TurtleParser method composeElement.

private void composeElement(Section section, Complex ctxt, Element element, Element parent) throws FHIRException {
    // "Extension".equals(element.getType())?
    // (element.getProperty().getDefinition().getIsModifier()? "modifierExtension" : "extension") ;
    String en = getFormalName(element);
    Complex t;
    if (element.getSpecial() == SpecialElement.BUNDLE_ENTRY && parent != null && parent.getNamedChildValue("fullUrl") != null) {
        String url = "<" + parent.getNamedChildValue("fullUrl") + ">";
        ctxt.linkedPredicate("fhir:" + en, url, linkResolver == null ? null : linkResolver.resolveProperty(element.getProperty()));
        t = section.subject(url);
    } else {
        t = ctxt.linkedPredicate("fhir:" + en, linkResolver == null ? null : linkResolver.resolveProperty(element.getProperty()));
    }
    if (element.getSpecial() != null)
        t.linkedPredicate("a", "fhir:" + element.fhirType(), linkResolver == null ? null : linkResolver.resolveType(element.fhirType()));
    if (element.hasValue())
        t.linkedPredicate("fhir:value", ttlLiteral(element.getValue(), element.getType()), linkResolver == null ? null : linkResolver.resolveType(element.getType()));
    if (element.getProperty().isList() && (!element.isResource() || element.getSpecial() == SpecialElement.CONTAINED))
        t.linkedPredicate("fhir:index", Integer.toString(element.getIndex()), linkResolver == null ? null : linkResolver.resolvePage("rdf.html#index"));
    if ("Coding".equals(element.getType()))
        decorateCoding(t, element, section);
    if (Utilities.existsInList(element.getType(), "Reference"))
        decorateReference(t, element);
    else if (Utilities.existsInList(element.getType(), "canonical"))
        decorateCanonical(t, element);
    if ("canonical".equals(element.getType())) {
        String refURI = element.primitiveValue();
        if (refURI != null) {
            String uriType = getURIType(refURI);
            if (uriType != null && !section.hasSubject(refURI))
                section.triple(refURI, "a", "fhir:" + uriType);
        }
    }
    if ("Reference".equals(element.getType())) {
        String refURI = getReferenceURI(element.getChildValue("reference"));
        if (refURI != null) {
            String uriType = getURIType(refURI);
            if (uriType != null && !section.hasSubject(refURI))
                section.triple(refURI, "a", "fhir:" + uriType);
        }
    }
    for (Element child : element.getChildren()) {
        if ("xhtml".equals(child.getType())) {
            String childfn = getFormalName(child);
            t.predicate("fhir:" + childfn, ttlLiteral(child.getValue(), child.getType()));
        } else
            composeElement(section, t, child, element);
    }
}

Example 80 with Section

use of org.hl7.fhir.utilities.turtle.Turtle.Section in project org.hl7.fhir.core by hapifhir.

the class Turtle method section.

public Section section(String sn) {
    if (hasSection(sn))
        throw new Error("Duplicate section name " + sn);
    Section s = new Section();
    s.name = sn;
    sections.add(s);
    return s;
}