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Example 81 with InvalidSettingsException

use of org.knime.core.node.InvalidSettingsException in project knime-core by knime.

the class VariableToTableNodeModel method createOutSpec.

private DataTableSpec createOutSpec() throws InvalidSettingsException {
    List<Pair<String, FlowVariable.Type>> vars;
    if (m_settings.getIncludeAll()) {
        vars = getAllVariables();
    } else {
        vars = m_settings.getVariablesOfInterest();
    }
    if (vars.isEmpty()) {
        throw new InvalidSettingsException("No variables selected");
    }
    DataColumnSpec[] specs = new DataColumnSpec[vars.size()];
    for (int i = 0; i < vars.size(); i++) {
        Pair<String, FlowVariable.Type> c = vars.get(i);
        DataType type;
        switch(c.getSecond()) {
            case DOUBLE:
                type = DoubleCell.TYPE;
                break;
            case INTEGER:
                type = IntCell.TYPE;
                break;
            case STRING:
                type = StringCell.TYPE;
                break;
            default:
                throw new InvalidSettingsException("Unsupported variable type: " + c.getSecond());
        }
        specs[i] = new DataColumnSpecCreator(c.getFirst(), type).createSpec();
    }
    return new DataTableSpec(specs);
}
Also used : DataTableSpec(org.knime.core.data.DataTableSpec) DataColumnSpecCreator(org.knime.core.data.DataColumnSpecCreator) PortType(org.knime.core.node.port.PortType) DataType(org.knime.core.data.DataType) DataColumnSpec(org.knime.core.data.DataColumnSpec) InvalidSettingsException(org.knime.core.node.InvalidSettingsException) DataType(org.knime.core.data.DataType) Pair(org.knime.core.util.Pair) FlowVariable(org.knime.core.node.workflow.FlowVariable)

Example 82 with InvalidSettingsException

use of org.knime.core.node.InvalidSettingsException in project knime-core by knime.

the class ReadPNGFromURLConfig method loadInDialog.

/**
 * Load config in dialog.
 * @param settings To load from
 * @param in Current input spec
 * @throws NotConfigurableException If no configuration possible, e.g.
 */
void loadInDialog(final NodeSettingsRO settings, final DataTableSpec in) throws NotConfigurableException {
    m_urlColName = settings.getString("urlColumn", null);
    DataColumnSpec col = in.getColumnSpec(m_urlColName);
    if (col == null || !col.getType().isCompatible(StringValue.class)) {
        try {
            guessDefaults(in);
        } catch (InvalidSettingsException e) {
            throw new NotConfigurableException("No valid input column available");
        }
    }
    // guessDefaults inits default values, so we can use them as fallback
    m_failOnInvalid = settings.getBoolean("failIfInvalid", m_failOnInvalid);
    m_newColumnName = settings.getString("newColumnName", m_newColumnName);
}
Also used : NotConfigurableException(org.knime.core.node.NotConfigurableException) DataColumnSpec(org.knime.core.data.DataColumnSpec) InvalidSettingsException(org.knime.core.node.InvalidSettingsException)

Example 83 with InvalidSettingsException

use of org.knime.core.node.InvalidSettingsException in project knime-core by knime.

the class DBGroupByNodeDialog method loadSettingsFrom.

/**
 * {@inheritDoc}
 */
@Override
protected void loadSettingsFrom(final NodeSettingsRO settings, final PortObjectSpec[] specs) throws NotConfigurableException {
    if (specs == null || specs.length < 1 || specs[0] == null) {
        throw new NotConfigurableException("No input spec available");
    }
    final DatabasePortObjectSpec dbspec = (DatabasePortObjectSpec) specs[0];
    final DataTableSpec spec = dbspec.getDataTableSpec();
    try {
        m_columnNamePolicy.loadSettingsFrom(settings);
    } catch (final InvalidSettingsException e) {
        throw new NotConfigurableException(e.getMessage());
    }
    m_aggregationPanel.loadSettingsFrom(settings, dbspec, spec);
    m_groupCol.loadSettingsFrom(settings, new DataTableSpec[] { spec });
    columnsChanged();
}
Also used : NotConfigurableException(org.knime.core.node.NotConfigurableException) DataTableSpec(org.knime.core.data.DataTableSpec) InvalidSettingsException(org.knime.core.node.InvalidSettingsException) DatabasePortObjectSpec(org.knime.core.node.port.database.DatabasePortObjectSpec)

Example 84 with InvalidSettingsException

use of org.knime.core.node.InvalidSettingsException in project knime-core by knime.

the class DBGroupByNodeModel method createDbOutSpec.

/**
 * @param inSpec Spec of the input database object
 * @param checkRetrieveMetadata true if the retrieveMetadataInConfigure settings should be respected,
 *            <code>false</code> if the metadata should be retrieved in any case (for execute)
 * @return Spec of the output database object
 * @throws InvalidSettingsException If the current settings are invalid
 */
private DatabasePortObjectSpec createDbOutSpec(final DatabasePortObjectSpec inSpec, final boolean checkRetrieveMetadata) throws InvalidSettingsException {
    if (m_groupByCols.getIncludeList().isEmpty() && m_aggregatedColumns.length == 0) {
        throw new InvalidSettingsException("Please select at least one group or aggregation column");
    }
    DatabaseQueryConnectionSettings connection = inSpec.getConnectionSettings(getCredentialsProvider());
    String newQuery = createQuery(connection.getQuery(), connection.getUtility().getStatementManipulator());
    connection = createDBQueryConnection(inSpec, newQuery);
    if (checkRetrieveMetadata && !connection.getRetrieveMetadataInConfigure()) {
        return null;
    }
    DataTableSpec tableSpec = createOutSpec(inSpec.getDataTableSpec(), connection, newQuery, checkRetrieveMetadata);
    return new DatabasePortObjectSpec(tableSpec, connection.createConnectionModel());
}
Also used : DatabaseQueryConnectionSettings(org.knime.core.node.port.database.DatabaseQueryConnectionSettings) DataTableSpec(org.knime.core.data.DataTableSpec) InvalidSettingsException(org.knime.core.node.InvalidSettingsException) DatabasePortObjectSpec(org.knime.core.node.port.database.DatabasePortObjectSpec) SettingsModelFilterString(org.knime.core.node.defaultnodesettings.SettingsModelFilterString) SettingsModelString(org.knime.core.node.defaultnodesettings.SettingsModelString)

Example 85 with InvalidSettingsException

use of org.knime.core.node.InvalidSettingsException in project knime-core by knime.

the class DBGroupByNodeModel method createOutSpec.

/**
 * @param inSpec Spec of the input table
 * @param checkRetrieveMetadata
 * @return Spec of the output table
 * @throws InvalidSettingsException if settings do not match the input specification
 */
private DataTableSpec createOutSpec(final DataTableSpec inSpec, final DatabaseConnectionSettings settings, final String query, final boolean ignoreExceptions) throws InvalidSettingsException {
    // Try get spec from database
    try {
        DatabaseQueryConnectionSettings querySettings = new DatabaseQueryConnectionSettings(settings, query);
        DatabaseReaderConnection conn = new DatabaseReaderConnection(querySettings);
        return conn.getDataTableSpec(getCredentialsProvider());
    } catch (SQLException e) {
        NodeLogger.getLogger(getClass()).info("Could not determine table spec from database, trying to guess now", e);
        if (!ignoreExceptions) {
            throw new InvalidSettingsException("Error in automatically build sql statement: " + e.getMessage());
        }
    // Otherwise guess spec
    }
    List<DataColumnSpec> colSpecs = new ArrayList<>();
    // Add all group by columns
    for (String col : m_groupByCols.getIncludeList()) {
        colSpecs.add(inSpec.getColumnSpec(col));
    }
    // Add aggregated columns
    for (int i = 0; i < m_aggregatedColumns.length; i++) {
        String col = m_aggregatedColumns[i];
        String method = m_aggregationMethods[i];
        if (inSpec.getColumnSpec(col) == null) {
            throw new InvalidSettingsException("Column '" + col + "' in aggregation " + method + " does not exist");
        }
        final DatabaseUtility databaseUtility = settings.getUtility();
        final DBAggregationFunction function = databaseUtility.getAggregationFunction(method);
        // Get type of column after aggregation
        DataType type = function.getType(inSpec.getColumnSpec(col).getType());
        colSpecs.add(new DataColumnSpecCreator(generateColumnName(col, method), type).createSpec());
    }
    return new DataTableSpec(colSpecs.toArray(new DataColumnSpec[colSpecs.size()]));
}
Also used : DatabaseUtility(org.knime.core.node.port.database.DatabaseUtility) DataTableSpec(org.knime.core.data.DataTableSpec) DataColumnSpecCreator(org.knime.core.data.DataColumnSpecCreator) DatabaseReaderConnection(org.knime.core.node.port.database.DatabaseReaderConnection) SQLException(java.sql.SQLException) ArrayList(java.util.ArrayList) SettingsModelFilterString(org.knime.core.node.defaultnodesettings.SettingsModelFilterString) SettingsModelString(org.knime.core.node.defaultnodesettings.SettingsModelString) DatabaseQueryConnectionSettings(org.knime.core.node.port.database.DatabaseQueryConnectionSettings) DataColumnSpec(org.knime.core.data.DataColumnSpec) InvalidSettingsException(org.knime.core.node.InvalidSettingsException) DBAggregationFunction(org.knime.core.node.port.database.aggregation.DBAggregationFunction) DataType(org.knime.core.data.DataType)

Aggregations

InvalidSettingsException (org.knime.core.node.InvalidSettingsException)818 DataTableSpec (org.knime.core.data.DataTableSpec)278 DataColumnSpec (org.knime.core.data.DataColumnSpec)211 SettingsModelString (org.knime.core.node.defaultnodesettings.SettingsModelString)153 NodeSettingsRO (org.knime.core.node.NodeSettingsRO)121 ColumnRearranger (org.knime.core.data.container.ColumnRearranger)113 IOException (java.io.IOException)109 DataCell (org.knime.core.data.DataCell)99 ArrayList (java.util.ArrayList)96 DataType (org.knime.core.data.DataType)89 PortObjectSpec (org.knime.core.node.port.PortObjectSpec)82 File (java.io.File)72 DataColumnSpecCreator (org.knime.core.data.DataColumnSpecCreator)69 DataRow (org.knime.core.data.DataRow)66 DoubleValue (org.knime.core.data.DoubleValue)58 CanceledExecutionException (org.knime.core.node.CanceledExecutionException)48 SettingsModelFilterString (org.knime.core.node.defaultnodesettings.SettingsModelFilterString)47 FileInputStream (java.io.FileInputStream)43 LinkedHashMap (java.util.LinkedHashMap)42 NotConfigurableException (org.knime.core.node.NotConfigurableException)41