use of org.knime.core.node.workflow.FlowVariable in project knime-core by knime.
the class JavaSnippetCellFactory method getCells.
/**
* {@inheritDoc}
*/
@SuppressWarnings("unchecked")
@Override
public DataCell[] getCells(final DataRow row) {
try {
if (null == m_jsnippet) {
m_jsnippet = m_snippet.createSnippetInstance();
// populate the fields in the m_jsnippet that are constant
// across the rows.
Field[] fs = m_jsnippet.getClass().getSuperclass().getDeclaredFields();
for (Field field : fs) {
if (field.getName().equals("m_flowVars")) {
field.setAccessible(true);
field.set(m_jsnippet, m_flowVars);
}
if (field.getName().equals(JavaSnippet.ROWCOUNT)) {
field.setAccessible(true);
field.set(m_jsnippet, m_rowCount);
}
}
}
// populate data structure with the input cells
Map<String, Cell> cellsMap = createCellsMap(row);
if (null == m_columns) {
m_columns = new ArrayList<>();
m_columns.addAll(cellsMap.keySet());
}
Field[] fs = m_jsnippet.getClass().getSuperclass().getDeclaredFields();
for (Field field : fs) {
if (field.getName().equals("m_cellsMap")) {
field.setAccessible(true);
field.set(m_jsnippet, cellsMap);
}
if (field.getName().equals("m_cells")) {
field.setAccessible(true);
List<Cell> cells = new ArrayList<>();
cells.addAll(cellsMap.values());
field.set(m_jsnippet, cells);
}
if (field.getName().equals("m_columns")) {
field.setAccessible(true);
field.set(m_jsnippet, m_columns);
}
if (field.getName().equals("m_inSpec")) {
field.setAccessible(true);
field.set(m_jsnippet, m_spec);
}
if (field.getName().equals(JavaSnippet.ROWID)) {
field.setAccessible(true);
field.set(m_jsnippet, row.getKey().getString());
}
if (field.getName().equals(JavaSnippet.ROWINDEX)) {
field.setAccessible(true);
field.set(m_jsnippet, m_rowIndex);
}
}
// populate the system input column fields with data
for (InCol inCol : m_snippet.getSystemFields().getInColFields()) {
Field field = m_jsnippet.getClass().getField(inCol.getJavaName());
final DataCell cell = row.getCell(m_spec.findColumnIndex(inCol.getKnimeName()));
if (cell.isMissing()) {
field.set(m_jsnippet, null);
continue;
}
// Get the converter factory for this column
final Optional<DataCellToJavaConverterFactory<?, ?>> factory = ConverterUtil.getDataCellToJavaConverterFactory(inCol.getConverterFactoryId());
if (!factory.isPresent()) {
throw new RuntimeException("Missing converter factory with ID: " + inCol.getConverterFactoryId());
}
final Object converted = factory.get().create().convertUnsafe(cell);
field.set(m_jsnippet, converted);
}
// reset the system output fields to null (see also bug 3781)
for (OutCol outCol : m_snippet.getSystemFields().getOutColFields()) {
Field field = m_jsnippet.getClass().getField(outCol.getJavaName());
field.set(m_jsnippet, null);
}
// populate the system input flow variable fields with data
for (InVar inCol : m_snippet.getSystemFields().getInVarFields()) {
Field field = m_jsnippet.getClass().getField(inCol.getJavaName());
Object v = m_flowVars.getValueOfType(inCol.getKnimeName(), inCol.getJavaType());
field.set(m_jsnippet, v);
}
} catch (Exception e) {
// re-throw exception
throw new RuntimeException(e);
}
try {
// evaluate user script
m_jsnippet.snippet();
} catch (Throwable thr) {
if (thr instanceof Abort) {
StringBuilder builder = new StringBuilder("Calculation aborted: ");
String message = thr.getMessage();
builder.append(message == null ? "<no details>" : message);
throw new RuntimeException(builder.toString(), thr);
} else {
Integer lineNumber = null;
for (StackTraceElement ste : thr.getStackTrace()) {
if (ste.getClassName().equals("JSnippet")) {
lineNumber = ste.getLineNumber();
}
}
StringBuilder msg = new StringBuilder();
msg.append("Evaluation of java snippet failed for row \"");
msg.append(row.getKey());
msg.append("\". ");
if (lineNumber != null) {
msg.append("The exception is caused by line ");
msg.append(lineNumber);
msg.append(" of the snippet. ");
}
if (thr.getMessage() != null) {
msg.append("Exception message:");
msg.append(thr.getMessage());
}
LOGGER.warn(msg.toString(), thr);
OutVarList outVars = m_snippet.getSystemFields().getOutVarFields();
if (outVars.size() > 0) {
// Abort if flow variables are defined
throw new RuntimeException("An error occured in an " + "expression with output flow variables.", thr);
}
OutColList outFields = m_snippet.getSystemFields().getOutColFields();
DataCell[] out = new DataCell[outFields.size()];
for (int i = 0; i < out.length; i++) {
// Return missing values for output fields
out[i] = DataType.getMissingCell();
}
m_rowIndex++;
return out;
}
}
try {
// update m_flowVars with output flow variable fields.
for (OutVar var : m_snippet.getSystemFields().getOutVarFields()) {
Field field = m_jsnippet.getClass().getField(var.getJavaName());
Object value = field.get(m_jsnippet);
if (null != value) {
Type type = var.getFlowVarType();
FlowVariable flowVar = null;
if (type.equals(Type.INTEGER)) {
flowVar = new FlowVariable(var.getKnimeName(), (Integer) value);
} else if (type.equals(Type.DOUBLE)) {
flowVar = new FlowVariable(var.getKnimeName(), (Double) value);
} else {
// case type.equals(Type.String)
flowVar = new FlowVariable(var.getKnimeName(), (String) value);
}
m_flowVars.put(flowVar);
} else {
throw new RuntimeException("Flow variable \"" + var.getKnimeName() + "\" has no value.");
}
}
// get output column fields
OutColList outFields = m_snippet.getSystemFields().getOutColFields();
DataCell[] out = new DataCell[outFields.size()];
for (int i = 0; i < out.length; i++) {
OutCol outField = outFields.get(i);
Field field = m_jsnippet.getClass().getField(outField.getJavaName());
Object value = field.get(m_jsnippet);
if (null == value) {
out[i] = DataType.getMissingCell();
} else {
final String id = outField.getConverterFactoryId();
Optional<JavaToDataCellConverterFactory<?>> factory = ConverterUtil.getJavaToDataCellConverterFactory(id);
if (!factory.isPresent()) {
throw new RuntimeException("Missing converter factory with ID: " + id);
}
out[i] = ((JavaToDataCellConverterFactory<Object>) factory.get()).create(m_context).convert(value);
}
}
// Cleanup Closeable inputs
for (final OutCol outCol : m_snippet.getSystemFields().getOutColFields()) {
final Field field = m_jsnippet.getClass().getField(outCol.getJavaName());
final Object value = field.get(m_jsnippet);
if (value instanceof Closeable) {
((Closeable) value).close();
}
if (value instanceof AutoCloseable) {
// From the doc: Calling close more than once *can* have visible side effects!
((AutoCloseable) value).close();
}
}
m_rowIndex++;
return out;
} catch (Exception e) {
// but in case re-throw exception
throw new RuntimeException(e);
}
}
use of org.knime.core.node.workflow.FlowVariable in project knime-core by knime.
the class JavaEditVarNodeModel method performExecute.
/**
*/
private void performExecute(final ExecutionContext exec) {
FlowVariableRepository flowVarRepo = new FlowVariableRepository(getAvailableInputFlowVariables());
m_snippet.execute(flowVarRepo, exec);
for (FlowVariable var : flowVarRepo.getModified()) {
Type type = var.getType();
if (type.equals(Type.INTEGER)) {
pushFlowVariableInt(var.getName(), var.getIntValue());
} else if (type.equals(Type.DOUBLE)) {
pushFlowVariableDouble(var.getName(), var.getDoubleValue());
} else {
// case: type.equals(Type.STRING)
pushFlowVariableString(var.getName(), var.getStringValue());
}
}
}
use of org.knime.core.node.workflow.FlowVariable in project knime-core by knime.
the class AddOutFieldDialog method initKnimeNameComboBox.
/**
* Initialize the selection list for the knime name.
*/
private void initKnimeNameComboBox() {
m_replacedKnimeName.removeAllItems();
if (m_fieldType.getSelectedItem().equals(FieldType.Column)) {
for (DataColumnSpec colSpec : m_spec) {
m_replacedKnimeName.addItem(colSpec);
}
m_replacedKnimeName.setRenderer(new DataColumnSpecListCellRenderer());
} else {
for (FlowVariable flowVar : m_flowVars.values()) {
// created.
if (OutFieldsTableModel.verifyNameOfFlowVariable(flowVar.getName())) {
m_replacedKnimeName.addItem(flowVar);
}
}
m_replacedKnimeName.setRenderer(new FlowVariableListCellRenderer());
}
if (m_replacedKnimeName.getItemCount() <= 0) {
m_replacedKnimeName.setEnabled(false);
m_knimeName.setEnabled(true);
m_replace.setEnabled(false);
m_replace.setSelected(false);
m_append.setSelected(true);
} else {
m_replacedKnimeName.setEnabled(true);
m_replace.setEnabled(true);
}
}
use of org.knime.core.node.workflow.FlowVariable in project knime-core by knime.
the class OutFieldsTable method getTargetFieldName.
/**
* Returns a name under which the output column or flow variable can be accessed or defined in the target script
*
* @param row the row to check
* @return the target name
*/
public String getTargetFieldName(final int row) {
// TODO make abstract, implement in concrete class in JS view
boolean isVariable = -1 == m_model.getIndex(Column.FIELD_TYPE) || m_model.getValueAt(row, Column.FIELD_TYPE).equals(FieldType.FlowVariable);
Object v = m_model.getValueAt(row, Column.COLUMN);
String knimeName;
if (v instanceof FlowVariable) {
knimeName = ((FlowVariable) v).getName();
} else if (v instanceof String) {
knimeName = (String) v;
} else {
return null;
}
if (isVariable) {
return "FLOW_VARIABLES[\"" + knimeName + "\"]";
} else {
return "OUT_COLUMNS[\"" + knimeName + "\"]";
}
}
use of org.knime.core.node.workflow.FlowVariable in project knime-core by knime.
the class VariableToTable2NodeModel method getVariablesOfInterest.
private List<Pair<String, FlowVariable.Type>> getVariablesOfInterest() {
List<Pair<String, FlowVariable.Type>> result = new ArrayList<Pair<String, FlowVariable.Type>>();
if (m_filter != null) {
String[] names = m_filter.applyTo(getAvailableFlowVariables()).getIncludes();
Map<String, FlowVariable> vars = getAvailableFlowVariables();
for (String name : names) {
result.add(new Pair<String, FlowVariable.Type>(name, vars.get(name).getType()));
}
}
return result;
}
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