Examples with Selection org.molgenis.api.model.Selection used on opensource projects

Example 6 with Selection

use of org.molgenis.api.model.Selection in project molgenis by molgenis.

the class DataServiceV3ImplTest method testFindAllUnknownRepositoryUnknownEntity.

@Test
void testFindAllUnknownRepositoryUnknownEntity() {
    String entityTypeId = "MyEntityType";
    Selection filter = Selection.FULL_SELECTION;
    Selection expand = Selection.EMPTY_SELECTION;
    when(metaDataService.getRepository(entityTypeId)).thenReturn(Optional.empty());
    assertThrows(UnknownRepositoryException.class, () -> dataServiceV3Impl.findAll(entityTypeId, null, filter, expand, Sort.EMPTY_SORT, 1, 1));
}

Example 7 with Selection

use of org.molgenis.api.model.Selection in project molgenis by molgenis.

the class EntityControllerTest method testGetEntities.

@Test
void testGetEntities() {
    String entityTypeId = "MyEntityTypeId";
    Selection filter = Selection.FULL_SELECTION;
    Selection expand = Selection.FULL_SELECTION;
    Query query = Query.builder().setOperator(Operator.MATCHES).setValue("value").build();
    Sort sort = Sort.create("field", Direction.ASC);
    ReadEntitiesRequest entityRequest = new ReadEntitiesRequest();
    entityRequest.setEntityTypeId(entityTypeId);
    entityRequest.setQ(query);
    entityRequest.setSort(sort);
    entityRequest.setFilter(filter);
    entityRequest.setExpand(expand);
    entityRequest.setSize(10);
    entityRequest.setPage(2);
    Entities entities = Entities.create(emptyList(), 30);
    when(dataServiceV3.findAll(entityTypeId, query, filter, expand, sort, 10, 2)).thenReturn(entities);
    EntityCollection entityCollection = EntityCollection.builder().setEntityTypeId(entityTypeId).setEntities(emptyList()).setPage(Page.builder().setOffset(20).setPageSize(10).setTotal(30).build()).build();
    EntitiesResponse entitiesResponse = mock(EntitiesResponse.class);
    when(entityMapper.map(entityCollection, filter, expand, 10, 2, 30)).thenReturn(entitiesResponse);
    assertEquals(entitiesResponse, entityController.getEntities(entityRequest));
}

Example 8 with Selection

use of org.molgenis.api.model.Selection in project molgenis by molgenis.

the class EntityMapperImplTest method testMapEntityExpandXref.

@Test
void testMapEntityExpandXref() throws URISyntaxException {
    Entity refRefEntity = createMockEntity(XREF, "RefRefEntityType", "refRefId0");
    Entity refEntity = createMockEntity(XREF, "RefEntityType", "refId0");
    Entity entity = createMockEntity(XREF);
    doReturn(refRefEntity).when(refEntity).getEntity("attr");
    doReturn(refEntity).when(entity).getEntity("attr");
    URI refRefSelf = new URI("http://localhost/api/data/RefRefEntityType/refRefId0");
    EntityResponse expectedRefRefEntityResponse = EntityResponse.builder().setLinks(LinksResponse.create(null, refRefSelf, null)).build();
    URI refSelf = new URI("http://localhost/api/data/RefEntityType/refId0");
    EntityResponse expectedRefEntityResponse = EntityResponse.builder().setLinks(LinksResponse.create(null, refSelf, null)).setData(singletonMap("attr", expectedRefRefEntityResponse)).build();
    URI self = new URI("http://localhost/api/data/EntityType/id0");
    EntityResponse expectedEntityResponse = EntityResponse.builder().setLinks(LinksResponse.create(null, self, null)).setData(singletonMap("attr", expectedRefEntityResponse)).build();
    assertEquals(expectedEntityResponse, entityMapper.map(entity, FULL_SELECTION, new Selection(singletonMap("attr", null))));
}

Example 9 with Selection

use of org.molgenis.api.model.Selection in project molgenis by molgenis.

the class FetchMapperTest method testToFetch.

@Test
void testToFetch() {
    EntityType entityType = mock(EntityType.class);
    Attribute attribute = mock(Attribute.class);
    when(attribute.getName()).thenReturn("test");
    Attribute attributeXref = mock(Attribute.class);
    when(attributeXref.getName()).thenReturn("xref");
    when(attributeXref.getDataType()).thenReturn(AttributeType.XREF);
    when(entityType.getAtomicAttributes()).thenReturn(Arrays.asList(attribute, attributeXref));
    Selection expand = new Selection(Collections.singletonMap("xref", Selection.FULL_SELECTION));
    Selection filter = Selection.FULL_SELECTION;
    Fetch expected = new Fetch().field("xref").field("test");
    assertEquals(expected, fetchMapper.toFetch(entityType, filter, expand));
}

Example 10 with Selection

use of org.molgenis.api.model.Selection in project molgenis by molgenis.

the class EntityController method getReferencedEntities.

@Transactional(readOnly = true)
@GetMapping("/{entityTypeId}/{entityId}/{fieldId}")
public EntitiesResponse getReferencedEntities(@Valid ReadSubresourceRequest entitiesRequest) {
    String entityTypeId = entitiesRequest.getEntityTypeId();
    String entityId = entitiesRequest.getEntityId();
    String fieldId = entitiesRequest.getFieldId();
    Selection filter = entitiesRequest.getFilter();
    Selection expand = entitiesRequest.getExpand();
    int size = entitiesRequest.getSize();
    int page = entitiesRequest.getPage();
    Sort sort = entitiesRequest.getSort();
    Entities entities = dataServiceV3.findSubresources(entityTypeId, entityId, fieldId, entitiesRequest.getQ().orElse(null), filter, expand, sort, size, page);
    EntityCollection entityCollection = EntityCollection.builder().setEntityTypeId(entityTypeId).setEntities(entities.getEntities()).setPage(Page.builder().setOffset(size * page).setPageSize(size).setTotal(entities.getTotal()).build()).build();
    return entityMapper.map(entityCollection, filter, expand, size, page, entities.getTotal());
}