Examples with AlgorithmState org.molgenis.semanticmapper.mapping.model.AttributeMapping.AlgorithmState used on opensource projects

Example 1 with AlgorithmState

use of org.molgenis.semanticmapper.mapping.model.AttributeMapping.AlgorithmState in project molgenis by molgenis.

the class MappingServiceController method getFirstAttributeMappingInfo.

/**
 * Find the firstattributeMapping skip the the algorithmStates that are given in the {@link AttributeMapping} to an
 * {@link EntityMapping}.
 *
 * @param mappingProjectId    ID of the mapping project
 * @param target              name of the target entity
 * @param skipAlgorithmStates the mapping algorithm states that should skip
 */
@PostMapping("/firstattributemapping")
@ResponseBody
public FirstAttributeMappingInfo getFirstAttributeMappingInfo(@RequestParam() String mappingProjectId, @RequestParam() String target, @RequestParam(value = "skipAlgorithmStates[]") List<AlgorithmState> skipAlgorithmStates, Model model) {
    MappingProject mappingProject = mappingService.getMappingProject(mappingProjectId);
    if (hasWritePermission(mappingProject)) {
        MappingTarget mappingTarget = mappingProject.getMappingTarget(target);
        List<String> sourceNames = mappingTarget.getEntityMappings().stream().map(i -> i.getSourceEntityType().getId()).collect(Collectors.toList());
        EntityType targetEntityMeta = mappingTarget.getTarget();
        for (Attribute attribute : targetEntityMeta.getAtomicAttributes()) {
            if (attribute.equals(targetEntityMeta.getIdAttribute())) {
                continue;
            }
            for (String source : sourceNames) {
                EntityMapping entityMapping = mappingTarget.getMappingForSource(source);
                AttributeMapping attributeMapping = entityMapping.getAttributeMapping(attribute.getName());
                if (null != attributeMapping) {
                    AlgorithmState algorithmState = attributeMapping.getAlgorithmState();
                    if (null != skipAlgorithmStates) {
                        if (skipAlgorithmStates.contains(algorithmState)) {
                            continue;
                        }
                    }
                }
                return FirstAttributeMappingInfo.create(mappingProjectId, target, source, attribute.getName());
            }
        }
    }
    return null;
}

Example 2 with AlgorithmState

use of org.molgenis.semanticmapper.mapping.model.AttributeMapping.AlgorithmState in project molgenis by molgenis.

the class AlgorithmGeneratorServiceImpl method generate.

@Override
public GeneratedAlgorithm generate(Attribute targetAttribute, Map<Attribute, ExplainedAttribute> sourceAttributes, EntityType targetEntityType, EntityType sourceEntityType) {
    String algorithm = StringUtils.EMPTY;
    AlgorithmState algorithmState = null;
    Set<Attribute> mappedSourceAttributes = null;
    if (sourceAttributes.size() > 0) {
        AlgorithmTemplate algorithmTemplate = algorithmTemplateService.find(sourceAttributes).findFirst().orElse(null);
        if (algorithmTemplate != null) {
            algorithm = algorithmTemplate.render();
            mappedSourceAttributes = AlgorithmGeneratorHelper.extractSourceAttributesFromAlgorithm(algorithm, sourceEntityType);
            algorithm = convertUnitForTemplateAlgorithm(algorithm, targetAttribute, targetEntityType, mappedSourceAttributes, sourceEntityType);
            algorithmState = GENERATED_HIGH;
        } else {
            Entry<Attribute, ExplainedAttribute> firstEntry = sourceAttributes.entrySet().stream().findFirst().get();
            Attribute sourceAttribute = firstEntry.getKey();
            algorithm = generate(targetAttribute, Arrays.asList(sourceAttribute), targetEntityType, sourceEntityType);
            mappedSourceAttributes = AlgorithmGeneratorHelper.extractSourceAttributesFromAlgorithm(algorithm, sourceEntityType);
            algorithmState = firstEntry.getValue().isHighQuality() ? GENERATED_HIGH : GENERATED_LOW;
        }
    }
    return GeneratedAlgorithm.create(algorithm, mappedSourceAttributes, algorithmState);
}