Examples with Network org.obiba.mica.network.domain.Network used on opensource projects

Example 1 with Network

use of org.obiba.mica.network.domain.Network in project mica2 by obiba.

the class StudyPackageImportServiceImpl method importNetwork.

private void importNetwork(Network network, boolean publish, StudyPackage studyPackage) throws IOException {
    Network updated;
    try {
        Network existing = networkService.findById(network.getId());
        network.getStudyIds().stream().filter(sid -> !existing.getStudyIds().contains(sid)).forEach(sid -> existing.getStudyIds().add(sid));
        updated = existing;
    } catch (NoSuchNetworkException e) {
        updated = network;
    }
    for (Map.Entry<String, ByteSource> e : studyPackage.attachments.entrySet()) {
        Attachment attachment = network.getLogo();
        if (attachment != null && attachment.getId().equals(e.getKey())) {
            saveTempFile(attachment, e.getValue());
            updated.setLogo(attachment);
        }
    }
    networkService.save(updated);
    if (publish)
        networkService.publish(updated.getId(), true, PublishCascadingScope.ALL);
}

Example 2 with Network

use of org.obiba.mica.network.domain.Network in project mica2 by obiba.

the class IndividualStudyServiceTest method test_delete_study_conflict.

@Test
public void test_delete_study_conflict() {
    Study study = new Study();
    study.setName(en("name en").forFr("name fr"));
    individualStudyService.save(study);
    Network network = new Network();
    network.setId("test");
    network.setStudyIds(new ArrayList() {

        {
            add(study.getId());
        }
    });
    networkRepository.save(network);
    assertThat(studyStateRepository.findAll()).hasSize(1);
    exception.expect(ConstraintException.class);
    individualStudyService.delete(study.getId());
}

Example 3 with Network

use of org.obiba.mica.network.domain.Network in project mica2 by obiba.

the class PublishedNetworkResource method study.

@Path("/file/{fileId}")
public FileResource study(@PathParam("id") String id, @PathParam("fileId") String fileId) {
    checkAccess(id);
    FileResource fileResource = applicationContext.getBean(FileResource.class);
    Network network = getNetwork(id);
    if (network.getLogo() == null)
        throw NoSuchEntityException.withId(Attachment.class, fileId);
    fileResource.setAttachment(network.getLogo());
    return fileResource;
}

Example 4 with Network

use of org.obiba.mica.network.domain.Network in project mica2 by obiba.

the class NetworkService method saveInternal.

@SuppressWarnings("OverlyLongMethod")
private void saveInternal(@NotNull Network network, String comment, boolean cascade) {
    Network saved = network;
    if (network.isNew()) {
        generateId(saved);
    } else {
        saved = networkRepository.findOne(network.getId());
        if (saved != null) {
            BeanUtils.copyProperties(network, saved, "id", "version", "createdBy", "createdDate", "lastModifiedBy", "lastModifiedDate");
        } else {
            saved = network;
        }
    }
    if (saved.getLogo() != null && saved.getLogo().isJustUploaded()) {
        fileStoreService.save(saved.getLogo().getId());
        saved.getLogo().setJustUploaded(false);
    }
    ImmutableSet<String> invalidRoles = ImmutableSet.copyOf(Sets.difference(saved.membershipRoles(), Sets.newHashSet(micaConfigService.getConfig().getRoles())));
    for (String r : invalidRoles) {
        saved.removeRole(r);
    }
    NetworkState networkState = findEntityState(network, () -> {
        NetworkState defaultState = new NetworkState();
        defaultState.setName(network.getName());
        return defaultState;
    });
    if (!network.isNew())
        ensureGitRepository(networkState);
    networkState.incrementRevisionsAhead();
    networkStateRepository.save(networkState);
    saved.setLastModifiedDate(DateTime.now());
    if (cascade)
        networkRepository.saveWithReferences(saved);
    else
        networkRepository.save(saved);
    eventBus.post(new NetworkUpdatedEvent(saved));
    gitService.save(saved, comment);
}

Example 5 with Network

use of org.obiba.mica.network.domain.Network in project mica2 by obiba.

the class NetworkService method index.

/**
 * Index a specific {@link Network} without updating it.
 *
 * @param id
 * @throws NoSuchNetworkException
 */
public void index(@NotNull String id) throws NoSuchNetworkException {
    NetworkState networkState = getEntityState(id);
    Network network = findById(id);
    eventBus.post(new NetworkUpdatedEvent(network));
    processNetworkForPublishedNumberOfStudies(network);
    if (networkState.isPublished())
        eventBus.post(new NetworkPublishedEvent(network, getCurrentUsername()));
    else
        eventBus.post(new NetworkUnpublishedEvent(network));
}