Examples with Taxonomy org.obiba.opal.core.domain.taxonomy.Taxonomy used on opensource projects

Example 6 with Taxonomy

use of org.obiba.opal.core.domain.taxonomy.Taxonomy in project mica2 by obiba.

the class TaxonomyConfigServiceTest method merge_taxonomy_with_one_missing_vocabulary.

@Test
public void merge_taxonomy_with_one_missing_vocabulary() {
    Taxonomy tax001 = new Taxonomy("tax001");
    tax001.addVocabulary(createVocabulary("voc001", null, null));
    Taxonomy tax002 = new Taxonomy("tax002");
    new TaxonomyConfigService().mergeVocabulariesTerms(tax001, tax002);
    assert tax001.hasVocabulary("voc001");
}

Example 7 with Taxonomy

use of org.obiba.opal.core.domain.taxonomy.Taxonomy in project mica2 by obiba.

the class TaxonomyConfigServiceTest method merge_taxonomy_with_one_having_extra_vocabulary.

@Test
public void merge_taxonomy_with_one_having_extra_vocabulary() {
    Taxonomy tax001 = new Taxonomy("tax001");
    Taxonomy tax002 = new Taxonomy("tax002");
    tax002.addVocabulary(createVocabulary("voc002", null, null));
    new TaxonomyConfigService().mergeVocabulariesTerms(tax001, tax002);
    assert tax001.hasVocabulary("voc002");
}

Example 8 with Taxonomy

use of org.obiba.opal.core.domain.taxonomy.Taxonomy in project mica2 by obiba.

the class TaxonomyConfigServiceTest method validateTaxonomyDuplicateAlias.

@Test(expected = VocabularyDuplicateAliasException.class)
public void validateTaxonomyDuplicateAlias() {
    Taxonomy taxonomy = new Taxonomy("tax001");
    taxonomy.addVocabulary(createVocabulary("voc001", null, AttributeBuilder.newBuilder().field("tax.voc").alias("tax-voc").build()));
    taxonomy.addVocabulary(createVocabulary("voc002", null, AttributeBuilder.newBuilder().field("tax.voc").alias("tax-voc").build()));
    new TaxonomyConfigService().validateTaxonomy(taxonomy);
}

Example 9 with Taxonomy

use of org.obiba.opal.core.domain.taxonomy.Taxonomy in project mica2 by obiba.

the class TaxonomyConfigServiceTest method validateRangeTaxonomyWithoutTermsAndRange.

@Test
public void validateRangeTaxonomyWithoutTermsAndRange() {
    Taxonomy taxonomy = new Taxonomy("tax001");
    taxonomy.addVocabulary(createVocabulary("voc001", null, AttributeBuilder.newBuilder().field("tax.voc").alias("tax-voc-range").type("integer").build()));
    new TaxonomyConfigService().validateTaxonomy(taxonomy);
}

Example 10 with Taxonomy

use of org.obiba.opal.core.domain.taxonomy.Taxonomy in project mica2 by obiba.

the class TaxonomyConfigServiceTest method validateRangeTaxonomyWithTerms.

@Test
public void validateRangeTaxonomyWithTerms() {
    Taxonomy taxonomy = new Taxonomy("tax001");
    taxonomy.addVocabulary(createVocabulary("voc001", createTerms("term001", "term002"), AttributeBuilder.newBuilder().field("tax.voc").alias("tax-voc-range").range("true").build()));
    new TaxonomyConfigService().validateTaxonomy(taxonomy);
}