Examples with Taxonomy org.obiba.opal.core.domain.taxonomy.Taxonomy used on opensource projects

Example 21 with Taxonomy

use of org.obiba.opal.core.domain.taxonomy.Taxonomy in project mica2 by obiba.

the class TaxonomySearchResource method filterVocabulary.

@GET
@Path("/vocabulary/{vocabulary}/_filter")
@Timed
public Opal.VocabularyDto filterVocabulary(@PathParam("name") String name, @PathParam("vocabulary") String vocabularyName, @QueryParam("target") @DefaultValue("variable") String target, @QueryParam("query") String query, @QueryParam("locale") String locale) {
    TaxonomyTarget taxonomyTarget = getTaxonomyTarget(target);
    if (taxonomyTarget.equals(TaxonomyTarget.TAXONOMY))
        return Dtos.asDto(getTaxonomy(taxonomyTarget, name).getVocabulary(vocabularyName));
    List<String> foundVocabularies = filterVocabularies(taxonomyTarget, String.format("name:%s", vocabularyName), locale);
    if (foundVocabularies.isEmpty()) {
        throw new NoSuchVocabularyException(name, vocabularyName);
    }
    Taxonomy taxonomy = getTaxonomy(taxonomyTarget, name);
    Vocabulary vocabulary = taxonomy.getVocabulary(vocabularyName);
    Opal.VocabularyDto.Builder tBuilder = Dtos.asDto(vocabulary, false).toBuilder();
    String filteredQuery = String.format(Strings.isNullOrEmpty(query) ? "taxonomyName:%s AND vocabularyName:%s" : "taxonomyName:%s AND vocabularyName:%s AND (%s)", name, vocabularyName, query);
    Map<String, Map<String, List<String>>> taxoNamesMap = asMap(filterTerms(taxonomyTarget, filteredQuery, locale, null));
    if (taxoNamesMap.isEmpty() || !taxoNamesMap.containsKey(name) || taxoNamesMap.get(name).isEmpty() || taxoNamesMap.get(name).get(vocabularyName).isEmpty())
        return tBuilder.build();
    taxoNamesMap.get(name).get(vocabularyName).forEach(term -> tBuilder.addTerms(Dtos.asDto(vocabulary.getTerm(term))));
    return tBuilder.build();
}

Example 22 with Taxonomy

use of org.obiba.opal.core.domain.taxonomy.Taxonomy in project mica2 by obiba.

the class TaxonomySearchResource method filterTaxonomy.

@GET
@Path("/_filter")
@Timed
public Opal.TaxonomyDto filterTaxonomy(@PathParam("name") String name, @QueryParam("target") @DefaultValue("variable") String target, @QueryParam("query") String query, @QueryParam("locale") String locale) {
    TaxonomyTarget taxonomyTarget = getTaxonomyTarget(target);
    if (taxonomyTarget.equals(TaxonomyTarget.TAXONOMY))
        return Dtos.asDto(getTaxonomy(taxonomyTarget, name));
    List<String> filteredVocabularies = filterVocabularies(taxonomyTarget, query, locale);
    Map<String, Map<String, List<String>>> taxoNamesMap = asMap(filteredVocabularies, filterTerms(taxonomyTarget, query, locale, filteredVocabularies));
    Taxonomy taxonomy = getTaxonomy(taxonomyTarget, name);
    Opal.TaxonomyDto.Builder tBuilder = Dtos.asDto(taxonomy, false).toBuilder();
    if (taxoNamesMap.isEmpty() || !taxoNamesMap.containsKey(name) || taxoNamesMap.get(name).isEmpty())
        return tBuilder.build();
    populate(tBuilder, taxonomy, taxoNamesMap);
    return tBuilder.build();
}