Examples with APIException org.openmrs.api.APIException used on opensource projects

Example 51 with APIException

use of org.openmrs.api.APIException in project openmrs-core by openmrs.

the class PatientServiceImpl method saveCauseOfDeathObs.

/**
 * @see org.openmrs.api.PatientService#saveCauseOfDeathObs(org.openmrs.Patient, java.util.Date,
 *      org.openmrs.Concept, java.lang.String)
 */
@Override
public void saveCauseOfDeathObs(Patient patient, Date deathDate, Concept cause, String otherReason) throws APIException {
    if (patient == null) {
        throw new APIException("Patient.null", (Object[]) null);
    }
    if (deathDate == null) {
        throw new APIException("Patient.death.date.null", (Object[]) null);
    }
    if (cause == null) {
        throw new APIException("Patient.cause.null", (Object[]) null);
    }
    if (!patient.getDead()) {
        patient.setDead(true);
        patient.setDeathDate(deathDate);
        patient.setCauseOfDeath(cause);
    }
    log.debug("Patient is dead, so let's make sure there's an Obs for it");
    // need to make sure there is an Obs that represents the patient's
    // cause of death, if applicable
    String codProp = Context.getAdministrationService().getGlobalProperty("concept.causeOfDeath");
    Concept causeOfDeath = Context.getConceptService().getConcept(codProp);
    if (causeOfDeath != null) {
        List<Obs> obssDeath = Context.getObsService().getObservationsByPersonAndConcept(patient, causeOfDeath);
        if (obssDeath != null) {
            if (obssDeath.size() > 1) {
                log.error("Multiple causes of death (" + obssDeath.size() + ")?  Shouldn't be...");
            } else {
                Obs obsDeath;
                if (obssDeath.size() == 1) {
                    // already has a cause of death - let's edit it.
                    log.debug("Already has a cause of death, so changing it");
                    obsDeath = obssDeath.iterator().next();
                } else {
                    // no cause of death obs yet, so let's make one
                    log.debug("No cause of death yet, let's create one.");
                    obsDeath = new Obs();
                    obsDeath.setPerson(patient);
                    obsDeath.setConcept(causeOfDeath);
                    Location location = Context.getLocationService().getDefaultLocation();
                    if (location != null) {
                        obsDeath.setLocation(location);
                    } else {
                        log.error("Could not find a suitable location for which to create this new Obs");
                    }
                }
                // put the right concept and (maybe) text in this obs
                Concept currCause = patient.getCauseOfDeath();
                if (currCause == null) {
                    // set to NONE
                    log.debug("Current cause is null, attempting to set to NONE");
                    String noneConcept = Context.getAdministrationService().getGlobalProperty("concept.none");
                    currCause = Context.getConceptService().getConcept(noneConcept);
                }
                if (currCause != null) {
                    log.debug("Current cause is not null, setting to value_coded");
                    obsDeath.setValueCoded(currCause);
                    // ABKTODO: presume current locale?
                    obsDeath.setValueCodedName(currCause.getName());
                    Date dateDeath = patient.getDeathDate();
                    if (dateDeath == null) {
                        dateDeath = new Date();
                    }
                    obsDeath.setObsDatetime(dateDeath);
                    // check if this is an "other" concept - if so, then
                    // we need to add value_text
                    String otherConcept = Context.getAdministrationService().getGlobalProperty("concept.otherNonCoded");
                    Concept conceptOther = Context.getConceptService().getConcept(otherConcept);
                    if (conceptOther != null) {
                        if (conceptOther.equals(currCause)) {
                            // seems like this is an other concept -
                            // let's try to get the "other" field info
                            log.debug("Setting value_text as " + otherReason);
                            obsDeath.setValueText(otherReason);
                        } else {
                            log.debug("New concept is NOT the OTHER concept, so setting to blank");
                            obsDeath.setValueText("");
                        }
                    } else {
                        log.debug("Don't seem to know about an OTHER concept, so deleting value_text");
                        obsDeath.setValueText("");
                    }
                    Context.getObsService().saveObs(obsDeath, "updated by PatientService.saveCauseOfDeathObs");
                } else {
                    log.debug("Current cause is still null - aborting mission");
                }
            }
        }
    } else {
        log.debug("Cause of death is null - should not have gotten here without throwing an error on the form.");
    }
}

Example 52 with APIException

use of org.openmrs.api.APIException in project openmrs-core by openmrs.

the class PersonServiceImpl method retireRelationshipType.

/**
 * @see org.openmrs.api.PersonService#retireRelationshipType(org.openmrs.RelationshipType,
 *      java.lang.String)
 */
@Override
public RelationshipType retireRelationshipType(RelationshipType type, String retiredReason) throws APIException {
    if (retiredReason == null || retiredReason.length() < 1) {
        throw new APIException("Relationship.retiring.reason.required", (Object[]) null);
    }
    type.setRetired(true);
    type.setRetiredBy(Context.getAuthenticatedUser());
    type.setDateRetired(new Date());
    type.setRetireReason(retiredReason);
    return Context.getPersonService().saveRelationshipType(type);
}

Example 53 with APIException

use of org.openmrs.api.APIException in project openmrs-core by openmrs.

the class HL7ServiceImpl method writeHL7InArchiveToFileSystem.

/**
 * writes a given hl7 archive to the file system
 *
 * @param hl7InArchive the hl7 archive to write to the file system
 */
private URI writeHL7InArchiveToFileSystem(HL7InArchive hl7InArchive) throws APIException {
    PrintWriter writer = null;
    File destinationDir = HL7Util.getHl7ArchivesDirectory();
    try {
        // number formatter used to format month and day with zero padding
        DecimalFormat df = new DecimalFormat("00");
        // write the archive to a separate file while grouping them according to
        // the year, month and date of month when they were stored in the archives table
        Calendar calendar = Calendar.getInstance(Context.getLocale());
        calendar.setTime(hl7InArchive.getDateCreated());
        // resolve the year folder from the date of creation of the archive
        File yearDir = new File(destinationDir, Integer.toString(calendar.get(Calendar.YEAR)));
        if (!yearDir.isDirectory()) {
            yearDir.mkdirs();
        }
        // resolve the appropriate month folder
        File monthDir = new File(yearDir, df.format(calendar.get(Calendar.MONTH) + 1));
        if (!monthDir.isDirectory()) {
            monthDir.mkdirs();
        }
        // resolve the appropriate day of month folder
        File dayDir = new File(monthDir, df.format(calendar.get(Calendar.DAY_OF_MONTH)));
        if (!dayDir.isDirectory()) {
            dayDir.mkdirs();
        }
        // use the uuid, source id and source key(if present) to generate the file name
        File fileToWriteTo = new File(dayDir, hl7InArchive.getUuid() + (StringUtils.isBlank(hl7InArchive.getHL7SourceKey()) ? "" : "_" + hl7InArchive.getHL7SourceKey()) + ".txt");
        // write the hl7 data to the file
        writer = new PrintWriter(new OutputStreamWriter(new FileOutputStream(fileToWriteTo), StandardCharsets.UTF_8));
        writer.write(hl7InArchive.getHL7Data());
        // check if there was an error while writing to the current file
        if (writer.checkError()) {
            log.warn("An Error occured while writing hl7 archive with id '" + hl7InArchive.getHL7InArchiveId() + "' to the file system");
            throw new APIException("Hl7Service.write.no.error", (Object[]) null);
        }
        // hand back the URI for the file
        return fileToWriteTo.toURI();
    } catch (FileNotFoundException e) {
        log.warn("Failed to write hl7 archive with id '" + hl7InArchive.getHL7InArchiveId() + "' to the file system ", e);
        throw new APIException("Hl7Service.write.error", null, e);
    } finally {
        if (writer != null) {
            writer.close();
        }
    }
}

Example 54 with APIException

use of org.openmrs.api.APIException in project openmrs-core by openmrs.

the class NameTemplate method format.

public String format(PersonName personName) {
    List<String> personNameLines = new ArrayList<>();
    List<List<Map<String, String>>> lines = getLines();
    String layoutToken = getLayoutToken();
    try {
        for (List<Map<String, String>> line : lines) {
            StringBuilder nameLine = new StringBuilder();
            Boolean hasToken = false;
            for (Map<String, String> lineToken : line) {
                if (lineToken.get("isToken").equals(layoutToken)) {
                    String tokenValue = BeanUtils.getProperty(personName, lineToken.get("codeName"));
                    if (StringUtils.isNotBlank(tokenValue)) {
                        hasToken = true;
                        nameLine.append(tokenValue);
                    }
                } else {
                    nameLine.append(lineToken.get("displayText"));
                }
            }
            // only display a line if there's at least one token within it we've been able to resolve
            String nameLineString = nameLine.toString();
            if (StringUtils.isNotBlank(nameLineString) && hasToken) {
                personNameLines.add(nameLineString);
            }
        }
        // bit of hack, but we ignore the "line-by-line" format and just delimit a "line" with blank space
        return StringUtils.join(personNameLines, " ");
    } catch (Exception e) {
        throw new APIException("Unable to format personName " + personName.getId() + " using name template", e);
    }
}

Example 55 with APIException

use of org.openmrs.api.APIException in project openmrs-core by openmrs.

the class ConceptServiceImpl method convertBooleanConceptToCoded.

/**
 * @see org.openmrs.api.ConceptService#convertBooleanConceptToCoded(org.openmrs.Concept)
 */
@Override
public void convertBooleanConceptToCoded(Concept conceptToChange) throws APIException {
    if (conceptToChange != null) {
        if (!conceptToChange.getDatatype().isBoolean()) {
            throw new APIException("Concept.datatype.invalid", (Object[]) null);
        }
        conceptToChange.setDatatype(getConceptDatatypeByName("Coded"));
        conceptToChange.addAnswer(new ConceptAnswer(getTrueConcept()));
        conceptToChange.addAnswer(new ConceptAnswer(getFalseConcept()));
        Context.getConceptService().saveConcept(conceptToChange);
    }
}