Examples with ObsGroupMatcher org.openmrs.module.emrapi.matcher.ObsGroupMatcher used on opensource projects

Example 1 with ObsGroupMatcher

use of org.openmrs.module.emrapi.matcher.ObsGroupMatcher in project openmrs-module-coreapps by openmrs.

the class EncounterDiagnosesTagHandlerComponentTest method testHandleSubmissionHandlesValidSubmissionEditingForm.

@Test
public void testHandleSubmissionHandlesValidSubmissionEditingForm() throws Exception {
    final DiagnosisMetadata dmd = emrApiProperties.getDiagnosisMetadata();
    final Date date = new Date();
    // first, create an encounter
    final Concept malaria = conceptService.getConcept(11);
    final Patient patient = patientService.getPatient(8);
    final Encounter existingEncounter = new Encounter();
    existingEncounter.setEncounterType(new EncounterType(1));
    existingEncounter.setPatient(patient);
    existingEncounter.setEncounterDatetime(date);
    existingEncounter.setLocation(locationService.getLocation(2));
    Obs primaryDiagnosis = dmd.buildDiagnosisObsGroup(new Diagnosis(new CodedOrFreeTextAnswer(malaria), Diagnosis.Order.PRIMARY));
    Obs secondaryDiagnosis = dmd.buildDiagnosisObsGroup(new Diagnosis(new CodedOrFreeTextAnswer("Unknown disease"), Diagnosis.Order.SECONDARY));
    existingEncounter.addObs(primaryDiagnosis);
    existingEncounter.addObs(secondaryDiagnosis);
    encounterService.saveEncounter(existingEncounter);
    ObjectMapper jackson = new ObjectMapper();
    ArrayNode json = jackson.createArrayNode();
    {
        // change the existing primary diagnosis from PRESUMED to CONFIRMED
        ObjectNode diagnosisNode = json.addObject();
        diagnosisNode.put("certainty", "CONFIRMED");
        diagnosisNode.put("order", "PRIMARY");
        diagnosisNode.put("diagnosis", CodedOrFreeTextAnswer.CONCEPT_PREFIX + "11");
        diagnosisNode.put("existingObs", primaryDiagnosis.getObsId());
    }
    {
        // this is a new diagnosis
        ObjectNode diagnosisNode = json.addObject();
        diagnosisNode.put("certainty", "PRESUMED");
        diagnosisNode.put("order", "SECONDARY");
        diagnosisNode.put("diagnosis", CodedOrFreeTextAnswer.NON_CODED_PREFIX + "I had spelled it wrong before");
    }
    final String jsonToSubmit = jackson.writeValueAsString(json);
    new RegressionTestHelper() {

        @Override
        public String getXmlDatasetPath() {
            return "";
        }

        @Override
        public String getFormName() {
            return "encounterDiagnosesSimpleForm";
        }

        @Override
        public Map<String, Object> getFormEntrySessionAttributes() {
            Map<String, Object> attributes = new HashMap<String, Object>();
            attributes.put("uiUtils", new TestUiUtils() {

                @Override
                public String includeFragment(String providerName, String fragmentId, Map<String, Object> config) throws PageAction {
                    return "[[ included fragment " + providerName + "." + fragmentId + " here ]]";
                }
            });
            return attributes;
        }

        @Override
        public Patient getPatientToView() throws Exception {
            return patient;
        }

        @Override
        public Encounter getEncounterToEdit() {
            return existingEncounter;
        }

        @Override
        public String[] widgetLabelsForEdit() {
            return new String[] { "Date:", "Location:", "Provider:", "Encounter Type:" };
        }

        @Override
        public void setupEditRequest(MockHttpServletRequest request, Map<String, String> widgets) {
            request.setParameter(widgets.get("Date:"), dateAsString(date));
            request.setParameter(widgets.get("Location:"), "2");
            request.setParameter(widgets.get("Provider:"), "1");
            request.setParameter(widgets.get("Encounter Type:"), "1");
            request.setParameter("encounterDiagnoses", jsonToSubmit);
        }

        @Override
        public void testEditFormHtml(String html) {
            System.out.println(html);
        }

        @Override
        public void testEditedResults(SubmissionResults results) {
            results.assertNoErrors();
            results.assertEncounterEdited();
            List<Obs> diagnoses = new ArrayList<Obs>();
            for (Obs obs : results.getEncounterCreated().getObsAtTopLevel(true)) {
                if (dmd.isDiagnosis(obs)) {
                    diagnoses.add(obs);
                }
            }
            Matcher<Obs> newPrimary = new ObsGroupMatcher().withGroupingConcept(dmd.getDiagnosisSetConcept()).withNonVoidedObs(dmd.getDiagnosisCertaintyConcept(), dmd.getConceptFor(Diagnosis.Certainty.CONFIRMED)).withVoidedObs(dmd.getDiagnosisCertaintyConcept(), dmd.getConceptFor(Diagnosis.Certainty.PRESUMED)).withNonVoidedObs(dmd.getDiagnosisOrderConcept(), dmd.getConceptFor(Diagnosis.Order.PRIMARY)).withNonVoidedObs(dmd.getCodedDiagnosisConcept(), malaria);
            Matcher<Obs> newSecondary = new ObsGroupMatcher().withGroupingConcept(dmd.getDiagnosisSetConcept()).withNonVoidedObs(dmd.getDiagnosisCertaintyConcept(), dmd.getConceptFor(Diagnosis.Certainty.PRESUMED)).withNonVoidedObs(dmd.getDiagnosisOrderConcept(), dmd.getConceptFor(Diagnosis.Order.SECONDARY)).withNonVoidedObs(dmd.getNonCodedDiagnosisConcept(), "I had spelled it wrong before");
            Matcher<Obs> oldSecondary = new ObsGroupMatcher().withGroupingConcept(dmd.getDiagnosisSetConcept()).withVoidedObs(dmd.getDiagnosisCertaintyConcept(), dmd.getConceptFor(Diagnosis.Certainty.PRESUMED)).withVoidedObs(dmd.getDiagnosisOrderConcept(), dmd.getConceptFor(Diagnosis.Order.SECONDARY)).withVoidedObs(dmd.getNonCodedDiagnosisConcept(), "Unknown disease").thatIsVoided();
            assertThat(diagnoses.size(), is(3));
            assertThat(diagnoses, containsInAnyOrder(newPrimary, newSecondary, oldSecondary));
        }
    }.run();
}