Examples with Keyword org.orcid.jaxb.model.message.Keyword used on opensource projects

Example 11 with Keyword

use of org.orcid.jaxb.model.message.Keyword in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method testUpdateProfileDefaultVisibilityForItemsAndUpdate.

@Test
@Transactional
@Rollback(true)
public void testUpdateProfileDefaultVisibilityForItemsAndUpdate() {
    OrcidProfile profile = createBasicProfile();
    Keyword k = new Keyword("word", null);
    Keywords kk = new Keywords();
    kk.getKeyword().add(k);
    ResearcherUrl r = new ResearcherUrl(new Url("http://whatever.com"), null);
    ResearcherUrls rr = new ResearcherUrls();
    rr.getResearcherUrl().add(r);
    ExternalIdentifier i = new ExternalIdentifier(null);
    i.setExternalIdReference(new ExternalIdReference("ref"));
    i.setExternalIdCommonName(new ExternalIdCommonName("cn"));
    ExternalIdentifiers ii = new ExternalIdentifiers();
    ii.getExternalIdentifier().add(i);
    OtherNames oo = new OtherNames();
    oo.addOtherName("other", null);
    profile.getOrcidBio().setKeywords(kk);
    profile.getOrcidBio().setResearcherUrls(rr);
    profile.getOrcidBio().setExternalIdentifiers(ii);
    profile.getOrcidBio().getPersonalDetails().setOtherNames(oo);
    profile = orcidProfileManager.createOrcidProfile(profile, true, false);
    assertEquals("word", profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getContent());
    assertEquals(Visibility.PRIVATE, profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getVisibility());
    assertEquals(new Url("http://whatever.com"), profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getUrl());
    assertEquals(Visibility.PRIVATE, profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getVisibility());
    assertEquals("cn", profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getExternalIdCommonName().getContent());
    assertEquals(Visibility.PRIVATE, profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getVisibility());
    assertEquals("other", profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getContent());
    assertEquals(Visibility.PRIVATE, profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getVisibility());
    profile.getOrcidBio().getKeywords().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getKeywords().getKeyword().get(0).setContent("kk - updated");
    profile.getOrcidBio().getResearcherUrls().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getResearcherUrls().getResearcherUrl().get(0).getUrl().setValue("http://whatever.com/updated");
    profile.getOrcidBio().getExternalIdentifiers().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getPersonalDetails().getOtherNames().setVisibility(Visibility.PUBLIC);
    profile = orcidProfileManager.updateOrcidProfile(profile);
    assertEquals("kk - updated", profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getContent());
    assertEquals(Visibility.PUBLIC, profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getVisibility());
    assertEquals(new Url("http://whatever.com/updated"), profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getUrl());
    assertEquals(Visibility.PUBLIC, profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getVisibility());
    assertEquals("cn", profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getExternalIdCommonName().getContent());
    assertEquals(Visibility.PUBLIC, profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getVisibility());
    assertEquals("other", profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getContent());
    assertEquals(Visibility.PUBLIC, profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getVisibility());
    OrcidProfile resultProfile = orcidProfileManager.retrieveOrcidProfile(TEST_ORCID);
    assertEquals(new Url("http://whatever.com/updated"), resultProfile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getUrl());
    assertEquals(Visibility.PUBLIC, resultProfile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getVisibility());
    assertEquals("cn", resultProfile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getExternalIdCommonName().getContent());
    assertEquals(Visibility.PUBLIC, resultProfile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getVisibility());
    assertEquals("other", resultProfile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getContent());
    assertEquals(Visibility.PUBLIC, resultProfile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getVisibility());
    Keyword kw = resultProfile.getOrcidBio().getKeywords().getKeyword().iterator().next();
    assertEquals("kk - updated", kw.getContent());
    assertEquals(Visibility.PUBLIC, kw.getVisibility());
}

Example 12 with Keyword

use of org.orcid.jaxb.model.message.Keyword in project ORCID-Source by ORCID.

the class OrcidProfileManagerBaseTest method createFullOrcidProfile.

protected OrcidProfile createFullOrcidProfile() {
    OrcidProfile profile2 = new OrcidProfile();
    profile2.setPassword("password");
    profile2.setVerificationCode("1234");
    profile2.setOrcidIdentifier(TEST_ORCID);
    OrcidBio bio = new OrcidBio();
    ContactDetails contactDetails = new ContactDetails();
    contactDetails.addOrReplacePrimaryEmail(new Email("will@orcid.org"));
    bio.setContactDetails(contactDetails);
    profile2.setOrcidBio(bio);
    PersonalDetails personalDetails = new PersonalDetails();
    personalDetails.setGivenNames(new GivenNames("William"));
    personalDetails.setFamilyName(new FamilyName("Simpson"));
    personalDetails.setCreditName(new CreditName("W. J. R. Simpson"));
    bio.setPersonalDetails(personalDetails);
    ResearcherUrls researcherUrls = new ResearcherUrls();
    researcherUrls.getResearcherUrl().add(new ResearcherUrl(new Url("http://www.wjrs.co.uk"), null));
    bio.setResearcherUrls(researcherUrls);
    Keywords keywords = new Keywords();
    bio.setKeywords(keywords);
    keywords.getKeyword().add(new Keyword("Java", null));
    bio.setBiography(new Biography("Will is a software developer at Semantico"));
    return profile2;
}

Example 13 with Keyword

use of org.orcid.jaxb.model.message.Keyword in project ORCID-Source by ORCID.

the class OrcidProfileToSolrDocument method convert.

@Deprecated
public OrcidSolrDocument convert(OrcidProfile profile) {
    // Check if the profile is locked
    if (profile.isLocked()) {
        profile.downgradeToOrcidIdentifierOnly();
    }
    OrcidSolrDocument profileIndexDocument = new OrcidSolrDocument();
    profileIndexDocument.setOrcid(profile.getOrcidIdentifier().getPath());
    OrcidDeprecated orcidDeprecated = profile.getOrcidDeprecated();
    if (orcidDeprecated != null) {
        profileIndexDocument.setPrimaryRecord(orcidDeprecated.getPrimaryRecord() != null ? orcidDeprecated.getPrimaryRecord().getOrcidIdentifier().getPath() : null);
    }
    OrcidBio orcidBio = profile.getOrcidBio();
    if (orcidBio != null) {
        PersonalDetails personalDetails = orcidBio.getPersonalDetails();
        boolean persistPersonalDetails = personalDetails != null;
        if (persistPersonalDetails) {
            profileIndexDocument.setFamilyName(personalDetails.getFamilyName() != null ? personalDetails.getFamilyName().getContent() : null);
            profileIndexDocument.setGivenNames(personalDetails.getGivenNames() != null ? personalDetails.getGivenNames().getContent() : null);
            profileIndexDocument.setCreditName(personalDetails.getCreditName() != null ? personalDetails.getCreditName().getContent() : null);
            List<OtherName> otherNames = personalDetails.getOtherNames() != null ? personalDetails.getOtherNames().getOtherName() : null;
            if (otherNames != null && !otherNames.isEmpty()) {
                List<String> names = new ArrayList<String>();
                for (OtherName otherName : otherNames) {
                    names.add(otherName.getContent());
                }
                profileIndexDocument.setOtherNames(names);
            }
        }
        ContactDetails contactDetails = orcidBio.getContactDetails();
        if (contactDetails != null) {
            for (Email email : contactDetails.getEmail()) {
                profileIndexDocument.addEmailAddress(email.getValue());
            }
        }
        ExternalIdentifiers externalIdentifiers = orcidBio.getExternalIdentifiers();
        if (externalIdentifiers != null) {
            List<String> extIdOrcids = new ArrayList<String>();
            List<String> extIdRefs = new ArrayList<String>();
            List<String> extIdOrcidsAndRefs = new ArrayList<String>();
            for (ExternalIdentifier externalIdentifier : externalIdentifiers.getExternalIdentifier()) {
                Source source = externalIdentifier.getSource();
                String sourcePath = null;
                if (source != null) {
                    sourcePath = source.retrieveSourcePath();
                    if (sourcePath != null) {
                        extIdOrcids.add(sourcePath);
                    }
                }
                ExternalIdReference externalIdReference = externalIdentifier.getExternalIdReference();
                if (externalIdReference != null) {
                    extIdRefs.add(externalIdReference.getContent());
                }
                if (NullUtils.noneNull(sourcePath, externalIdReference)) {
                    extIdOrcidsAndRefs.add(sourcePath + "=" + externalIdReference.getContent());
                }
            }
            if (!extIdOrcids.isEmpty()) {
                profileIndexDocument.setExternalIdSources(extIdOrcids);
            }
            if (!extIdRefs.isEmpty()) {
                profileIndexDocument.setExternalIdReferences(extIdRefs);
            }
            if (!extIdOrcidsAndRefs.isEmpty()) {
                profileIndexDocument.setExternalIdSourcesAndReferences(extIdOrcidsAndRefs);
            }
        }
        OrcidActivities orcidActivities = profile.getOrcidActivities();
        if (orcidActivities != null) {
            if (orcidBio != null && orcidBio.getKeywords() != null) {
                List<Keyword> keyWords = orcidBio.getKeywords().getKeyword();
                if (keyWords != null && keyWords.size() > 0) {
                    List<String> keywordValues = new ArrayList<String>();
                    for (Keyword keyword : keyWords) {
                        keywordValues.add(keyword.getContent());
                    }
                    profileIndexDocument.setKeywords(keywordValues);
                }
            }
        }
        List<OrcidWork> orcidWorks = profile.retrieveOrcidWorks() != null ? profile.retrieveOrcidWorks().getOrcidWork() : null;
        if (orcidWorks != null) {
            List<String> workTitles = new ArrayList<String>();
            Map<WorkExternalIdentifierType, List<String>> allExternalIdentifiers = new HashMap<WorkExternalIdentifierType, List<String>>();
            for (OrcidWork orcidWork : orcidWorks) {
                if (orcidWork.getWorkExternalIdentifiers() != null) {
                    for (WorkExternalIdentifier workExternalIdentifier : orcidWork.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                        /**
                         * Creates a map that contains all different
                         * external identifiers for the current work
                         */
                        boolean nullSafeCheckForWorkExternalIdentifier = workExternalIdentifier.getWorkExternalIdentifierId() != null && !StringUtils.isBlank(workExternalIdentifier.getWorkExternalIdentifierId().getContent());
                        if (nullSafeCheckForWorkExternalIdentifier) {
                            WorkExternalIdentifierType type = workExternalIdentifier.getWorkExternalIdentifierType();
                            if (!allExternalIdentifiers.containsKey(type)) {
                                List<String> content = new ArrayList<String>();
                                content.add(workExternalIdentifier.getWorkExternalIdentifierId().getContent());
                                allExternalIdentifiers.put(type, content);
                            } else {
                                allExternalIdentifiers.get(type).add(workExternalIdentifier.getWorkExternalIdentifierId().getContent());
                            }
                        }
                    }
                }
                if (orcidWork.getWorkTitle() != null) {
                    Title workMainTitle = orcidWork.getWorkTitle().getTitle();
                    Subtitle worksubTitle = orcidWork.getWorkTitle().getSubtitle();
                    TranslatedTitle translatedTitle = orcidWork.getWorkTitle().getTranslatedTitle();
                    if (workMainTitle != null && !StringUtils.isBlank(workMainTitle.getContent())) {
                        workTitles.add(workMainTitle.getContent());
                    }
                    if (worksubTitle != null && !StringUtils.isBlank(worksubTitle.getContent())) {
                        workTitles.add(worksubTitle.getContent());
                    }
                    if (translatedTitle != null && !StringUtils.isBlank(translatedTitle.getContent())) {
                        workTitles.add(translatedTitle.getContent());
                    }
                }
            }
            profileIndexDocument.setWorkTitles(workTitles);
            // Set the list of external identifiers to the document list
            addExternalIdentifiersToIndexDocument(profileIndexDocument, allExternalIdentifiers);
        }
        List<Funding> orcidFundings = profile.retrieveFundings() != null ? profile.retrieveFundings().getFundings() : null;
        if (orcidFundings != null) {
            List<String> fundingTitle = new ArrayList<String>();
            for (Funding orcidFunding : orcidFundings) {
                FundingTitle title = orcidFunding.getTitle();
                if (title != null) {
                    if (title.getTitle() != null && !StringUtils.isBlank(title.getTitle().getContent())) {
                        fundingTitle.add(title.getTitle().getContent());
                    }
                    if (title.getTranslatedTitle() != null && StringUtils.isBlank(title.getTranslatedTitle().getContent())) {
                        fundingTitle.add(title.getTranslatedTitle().getContent());
                    }
                }
            }
            profileIndexDocument.setFundingTitles(fundingTitle);
        }
    }
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion(OrcidMessage.DEFAULT_VERSION);
    orcidMessage.setOrcidProfile(profile);
    OrcidHistory orcidHistory = profile.getOrcidHistory();
    if (orcidHistory != null) {
        LastModifiedDate lastModifiedDate = orcidHistory.getLastModifiedDate();
        if (lastModifiedDate != null) {
            profileIndexDocument.setProfileLastModifiedDate(lastModifiedDate.getValue().toGregorianCalendar().getTime());
        }
        SubmissionDate submissionDate = orcidHistory.getSubmissionDate();
        if (submissionDate != null) {
            profileIndexDocument.setProfileSubmissionDate(submissionDate.getValue().toGregorianCalendar().getTime());
        }
    }
    return profileIndexDocument;
}

Example 14 with Keyword

use of org.orcid.jaxb.model.message.Keyword in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testDefaultPrivacyOnBio.

@Test
public void testDefaultPrivacyOnBio() {
    SecurityContextTestUtils.setUpSecurityContext("4444-4444-4444-4499", ScopePathType.ORCID_BIO_UPDATE);
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidProfile.setOrcidIdentifier(new OrcidIdentifier("4444-4444-4444-4499"));
    orcidMessage.setOrcidProfile(orcidProfile);
    OrcidBio orcidBio = new OrcidBio();
    orcidProfile.setOrcidBio(orcidBio);
    PersonalDetails personalDetails = new PersonalDetails();
    orcidBio.setPersonalDetails(personalDetails);
    GivenNames givenNames = new GivenNames("Test given names");
    personalDetails.setGivenNames(givenNames);
    CreditName creditName = new CreditName("Credit Name");
    personalDetails.setCreditName(creditName);
    ExternalIdentifier id = new ExternalIdentifier();
    id.setExternalIdCommonName(new ExternalIdCommonName("cn1"));
    id.setExternalIdReference(new ExternalIdReference("value1"));
    orcidBio.setExternalIdentifiers(new ExternalIdentifiers());
    orcidBio.getExternalIdentifiers().getExternalIdentifier().add(id);
    personalDetails.setOtherNames(new OtherNames());
    personalDetails.getOtherNames().addOtherName("on1", null);
    orcidBio.setKeywords(new Keywords());
    orcidBio.getKeywords().getKeyword().add(new Keyword("kw1", null));
    orcidBio.setResearcherUrls(new ResearcherUrls());
    orcidBio.getResearcherUrls().getResearcherUrl().add(new ResearcherUrl(new Url("http://rurl2.com"), null));
    t2OrcidApiServiceDelegator.updateBioDetails(mockedUriInfo, "4444-4444-4444-4499", orcidMessage);
    OrcidProfile p = orcidProfileManager.retrieveOrcidProfile("4444-4444-4444-4499");
    assertEquals("cn1", p.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(0).getExternalIdCommonName().getContent());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getExternalIdentifiers().getVisibility());
    assertEquals("on1", p.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().get(0).getContent());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getPersonalDetails().getOtherNames().getVisibility());
    assertEquals("kw1", p.getOrcidBio().getKeywords().getKeyword().get(0).getContent());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getKeywords().getVisibility());
    assertEquals(new Url("http://rurl2.com"), p.getOrcidBio().getResearcherUrls().getResearcherUrl().get(0).getUrl());
    assertEquals(Visibility.PUBLIC, p.getOrcidBio().getResearcherUrls().getVisibility());
// now test what happens if we add a new one.
}