Examples with ExternalIdentifiers org.orcid.jaxb.model.message.ExternalIdentifiers used on opensource projects

Example 1 with ExternalIdentifiers

use of org.orcid.jaxb.model.message.ExternalIdentifiers in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testAddExternalIdentifiersToDeprecatedAccount.

@Test(expected = OrcidDeprecatedException.class)
public void testAddExternalIdentifiersToDeprecatedAccount() {
    SecurityContextTestUtils.setUpSecurityContext();
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    orcidMessage.setOrcidProfile(new OrcidProfile());
    orcidMessage.getOrcidProfile().setOrcidBio(new OrcidBio());
    ExternalIdentifiers extIds = new ExternalIdentifiers();
    ExternalIdentifier extId1 = new ExternalIdentifier();
    String commonName = "common-name-1-" + System.currentTimeMillis();
    extId1.setExternalIdCommonName(new ExternalIdCommonName(commonName));
    extId1.setExternalIdReference(new ExternalIdReference("ext-id-reference-1"));
    extId1.setExternalIdUrl(new ExternalIdUrl("http://test.orcid.org/" + System.currentTimeMillis()));
    extIds.getExternalIdentifier().add(extId1);
    orcidMessage.getOrcidProfile().getOrcidBio().setExternalIdentifiers(extIds);
    t2OrcidApiServiceDelegator.addExternalIdentifiers(mockedUriInfo, "4444-4444-4444-444X", orcidMessage);
}

Example 2 with ExternalIdentifiers

use of org.orcid.jaxb.model.message.ExternalIdentifiers in project ORCID-Source by ORCID.

the class OrcidJaxbCopyManagerImpl method copyUpdatedExternalIdentifiersToExistingPreservingVisibility.

@Override
public void copyUpdatedExternalIdentifiersToExistingPreservingVisibility(OrcidBio existing, OrcidBio updated) {
    if (updated.getExternalIdentifiers() == null) {
        return;
    }
    ExternalIdentifiers existingExternalIdentifiers = existing.getExternalIdentifiers();
    ExternalIdentifiers updatedExternalIdentifiers = updated.getExternalIdentifiers();
    Visibility existingExternalIdentifiersVisibility = existingExternalIdentifiers != null ? existingExternalIdentifiers.getVisibility() : null;
    Visibility updatedExternalIdentifiersVisibility = updatedExternalIdentifiers.getVisibility();
    if (updatedExternalIdentifiersVisibility == null && existingExternalIdentifiersVisibility == null) {
        updatedExternalIdentifiers.setVisibility(OrcidVisibilityDefaults.EXTERNAL_IDENTIFIER_DEFAULT.getVisibility());
    } else if (updatedExternalIdentifiersVisibility == null && existingExternalIdentifiersVisibility != null) {
        updatedExternalIdentifiers.setVisibility(existingExternalIdentifiersVisibility);
    }
    existing.setExternalIdentifiers(updatedExternalIdentifiers);
}

Example 3 with ExternalIdentifiers

use of org.orcid.jaxb.model.message.ExternalIdentifiers in project ORCID-Source by ORCID.

the class OrcidMessageVersionConverterImplV1_1ToV1_2_rc1 method downgradeProfile.

private void downgradeProfile(OrcidProfile orcidProfile) {
    if (orcidProfile != null) {
        orcidProfile.setAffiliations(null);
        OrcidBio orcidBio = orcidProfile.getOrcidBio();
        if (orcidBio != null) {
            ContactDetails contactDetails = orcidBio.getContactDetails();
            if (contactDetails != null) {
                for (Email email : contactDetails.getEmail()) {
                    email.setSourceClientId(null);
                }
            }
            ExternalIdentifiers extIds = orcidBio.getExternalIdentifiers();
            if (extIds != null) {
                for (ExternalIdentifier extId : extIds.getExternalIdentifier()) {
                    extId.setSource(null);
                }
            }
        }
        if (orcidProfile.getOrcidActivities() != null) {
            if (orcidProfile.getOrcidActivities().getOrcidWorks() != null) {
                for (OrcidWork act : orcidProfile.getOrcidActivities().getOrcidWorks().getOrcidWork()) downGradeActivity(act);
            }
        }
    }
}

Example 4 with ExternalIdentifiers

use of org.orcid.jaxb.model.message.ExternalIdentifiers in project ORCID-Source by ORCID.

the class OrcidIndexManagerImplTest method getStandardOrcid.

private OrcidProfile getStandardOrcid() {
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidProfile.setOrcidIdentifier("1234");
    OrcidBio orcidBio = new OrcidBio();
    ContactDetails contactDetails = new ContactDetails();
    Email email = new Email("email");
    email.setVisibility(Visibility.PUBLIC);
    contactDetails.addOrReplacePrimaryEmail(email);
    orcidBio.setContactDetails(contactDetails);
    Keywords bioKeywords = new Keywords();
    bioKeywords.getKeyword().add(new Keyword("Pavement Studies", Visibility.PUBLIC));
    bioKeywords.getKeyword().add(new Keyword("Advanced Tea Making", Visibility.PUBLIC));
    bioKeywords.setVisibility(Visibility.PUBLIC);
    orcidBio.setKeywords(bioKeywords);
    PersonalDetails personalDetails = new PersonalDetails();
    CreditName creditName = new CreditName("credit name");
    creditName.setVisibility(Visibility.PUBLIC);
    personalDetails.setCreditName(creditName);
    FamilyName familyName = new FamilyName("familyName");
    familyName.setVisibility(Visibility.PUBLIC);
    personalDetails.setFamilyName(familyName);
    OtherNames otherNames = new OtherNames();
    otherNames.setVisibility(Visibility.PUBLIC);
    otherNames.getOtherName().add(new OtherName("Other 1", Visibility.PUBLIC));
    otherNames.getOtherName().add(new OtherName("Other 2", Visibility.PUBLIC));
    personalDetails.setOtherNames(otherNames);
    GivenNames givenNames = new GivenNames("givenNames");
    givenNames.setVisibility(Visibility.PUBLIC);
    personalDetails.setGivenNames(givenNames);
    orcidBio.setPersonalDetails(personalDetails);
    ExternalIdentifiers externalIdentifiers = new ExternalIdentifiers();
    externalIdentifiers.setVisibility(Visibility.PUBLIC);
    orcidBio.setExternalIdentifiers(externalIdentifiers);
    ExternalIdentifier externalIdentifier1 = createExternalIdentifier("45678", "defghi");
    externalIdentifiers.getExternalIdentifier().add(externalIdentifier1);
    ExternalIdentifier externalIdentifier2 = createExternalIdentifier("54321", "abc123");
    externalIdentifiers.getExternalIdentifier().add(externalIdentifier2);
    OrcidActivities orcidActivities = new OrcidActivities();
    orcidProfile.setOrcidActivities(orcidActivities);
    Affiliations affiliations = new Affiliations();
    orcidActivities.setAffiliations(affiliations);
    FundingList fundings = new FundingList();
    orcidActivities.setFundings(fundings);
    OrcidWorks orcidWorks = new OrcidWorks();
    OrcidWork orcidWork1 = new OrcidWork();
    orcidWork1.setVisibility(Visibility.PUBLIC);
    OrcidWork orcidWork2 = new OrcidWork();
    orcidWork2.setVisibility(Visibility.PUBLIC);
    OrcidWork orcidWork3 = new OrcidWork();
    orcidWork3.setVisibility(Visibility.LIMITED);
    WorkTitle workTitle1 = new WorkTitle();
    Title title1 = new Title("Work title 1");
    workTitle1.setTitle(title1);
    workTitle1.setSubtitle(null);
    orcidWork1.setWorkTitle(workTitle1);
    WorkExternalIdentifier wei = new WorkExternalIdentifier();
    wei.setWorkExternalIdentifierId(new WorkExternalIdentifierId("work1-pmid"));
    wei.setWorkExternalIdentifierType(WorkExternalIdentifierType.PMID);
    orcidWork1.setWorkExternalIdentifiers(new WorkExternalIdentifiers(Arrays.asList(wei)));
    WorkTitle workTitle2 = new WorkTitle();
    Title title2 = new Title("Work title 2");
    workTitle2.setSubtitle(null);
    workTitle2.setTitle(title2);
    orcidWork2.setWorkTitle(workTitle2);
    WorkTitle workTitle3 = new WorkTitle();
    Title title3 = new Title("Work Title 3");
    workTitle3.setSubtitle(null);
    workTitle3.setTitle(title3);
    orcidWork3.setWorkTitle(workTitle3);
    orcidWorks.setOrcidWork(new ArrayList<OrcidWork>(Arrays.asList(new OrcidWork[] { orcidWork1, orcidWork2, orcidWork3 })));
    orcidProfile.setOrcidWorks(orcidWorks);
    orcidProfile.setOrcidBio(orcidBio);
    return orcidProfile;
}

Example 5 with ExternalIdentifiers

use of org.orcid.jaxb.model.message.ExternalIdentifiers in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method setBio.

private void setBio(OrcidProfile profile, Visibility defaultVisibility) {
    OrcidBio bio = new OrcidBio();
    Biography biography = new Biography("This is my biography");
    if (defaultVisibility != null) {
        biography.setVisibility(defaultVisibility);
    }
    bio.setBiography(biography);
    ContactDetails contactDetails = new ContactDetails();
    Address address = new Address();
    address.setCountry(new Country(Iso3166Country.US));
    if (defaultVisibility != null) {
        address.getCountry().setVisibility(defaultVisibility);
    }
    contactDetails.setAddress(address);
    List<Email> emails = new ArrayList<Email>();
    Email email = new Email();
    email.setPrimary(true);
    email.setValue(System.currentTimeMillis() + "@test.orcid.org");
    emails.add(email);
    contactDetails.setEmail(emails);
    bio.setContactDetails(contactDetails);
    ExternalIdentifiers extIds = new ExternalIdentifiers();
    ExternalIdentifier extId = new ExternalIdentifier();
    extId.setExternalIdCommonName(new ExternalIdCommonName("common-name"));
    extId.setExternalIdReference(new ExternalIdReference("ext-id-reference"));
    extId.setExternalIdUrl(new ExternalIdUrl("http://orcid.org/ext-id"));
    extIds.getExternalIdentifier().add(extId);
    if (defaultVisibility != null) {
        extIds.setVisibility(defaultVisibility);
    }
    bio.setExternalIdentifiers(extIds);
    Keywords keywords = new Keywords();
    Keyword keyword = new Keyword();
    keyword.setContent("k1");
    keywords.getKeyword().add(keyword);
    if (defaultVisibility != null) {
        keywords.setVisibility(defaultVisibility);
    }
    bio.setKeywords(keywords);
    PersonalDetails personalDetails = new PersonalDetails();
    personalDetails.setCreditName(new CreditName("credit-name"));
    personalDetails.setGivenNames(new GivenNames("given-names"));
    personalDetails.setFamilyName(new FamilyName("family-name"));
    OtherNames otherNames = new OtherNames();
    OtherName otherName = new OtherName();
    otherName.setContent("o1");
    otherNames.getOtherName().add(otherName);
    if (defaultVisibility != null) {
        otherNames.setVisibility(defaultVisibility);
    }
    personalDetails.setOtherNames(otherNames);
    bio.setPersonalDetails(personalDetails);
    ResearcherUrls researcherUrls = new ResearcherUrls();
    ResearcherUrl researcherUrl = new ResearcherUrl();
    researcherUrl.setUrl(new Url("http://orcid.org/researcher-url-1"));
    researcherUrl.setUrlName(new UrlName("url-name-1"));
    researcherUrls.getResearcherUrl().add(researcherUrl);
    if (defaultVisibility != null) {
        researcherUrls.setVisibility(defaultVisibility);
    }
    bio.setResearcherUrls(researcherUrls);
    profile.setOrcidBio(bio);
}