Examples with ExternalIdReference org.orcid.jaxb.model.message.ExternalIdReference used on opensource projects

Example 1 with ExternalIdReference

use of org.orcid.jaxb.model.message.ExternalIdReference in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testAddDuplicatedExtIdsWhenThereIsNonPublicCountry.

@Test
public void testAddDuplicatedExtIdsWhenThereIsNonPublicCountry() {
    String userOrcid = "0000-0000-0000-0003";
    OrcidMessage message = new OrcidMessage();
    message.setMessageVersion("1.2_rc6");
    message.setOrcidProfile(new OrcidProfile());
    message.getOrcidProfile().setOrcidBio(new OrcidBio());
    ExternalIdentifiers extIds = new ExternalIdentifiers();
    ExternalIdentifier extId1 = new ExternalIdentifier();
    String commonName = "common-name-1-" + System.currentTimeMillis();
    extId1.setExternalIdCommonName(new ExternalIdCommonName(commonName));
    extId1.setExternalIdReference(new ExternalIdReference("ext-id-reference-1"));
    extId1.setExternalIdUrl(new ExternalIdUrl("http://test.orcid.org/" + System.currentTimeMillis()));
    extIds.getExternalIdentifier().add(extId1);
    message.getOrcidProfile().getOrcidBio().setExternalIdentifiers(extIds);
    //Add for client 1
    SecurityContextTestUtils.setUpSecurityContext(userOrcid, "APP-5555555555555555", ScopePathType.PERSON_UPDATE, ScopePathType.PERSON_READ_LIMITED);
    Response r = t2OrcidApiServiceDelegator.addExternalIdentifiers(null, userOrcid, message);
    assertNotNull(r);
    OrcidMessage newMessage1 = (OrcidMessage) r.getEntity();
    assertNotNull(newMessage1);
    assertNotNull(newMessage1.getOrcidProfile());
    assertNotNull(newMessage1.getOrcidProfile().getOrcidBio());
    assertNotNull(newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers());
    assertNotNull(newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier());
    assertEquals(4, newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().size());
    assertEquals(commonName, newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(3).getExternalIdCommonName().getContent());
    assertEquals("APP-5555555555555555", newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(3).getSource().retrieveSourcePath());
}

Example 2 with ExternalIdReference

use of org.orcid.jaxb.model.message.ExternalIdReference in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testAddExternalIdentifiersToDeprecatedAccount.

@Test(expected = OrcidDeprecatedException.class)
public void testAddExternalIdentifiersToDeprecatedAccount() {
    SecurityContextTestUtils.setUpSecurityContext();
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion("1.2_rc6");
    orcidMessage.setOrcidProfile(new OrcidProfile());
    orcidMessage.getOrcidProfile().setOrcidBio(new OrcidBio());
    ExternalIdentifiers extIds = new ExternalIdentifiers();
    ExternalIdentifier extId1 = new ExternalIdentifier();
    String commonName = "common-name-1-" + System.currentTimeMillis();
    extId1.setExternalIdCommonName(new ExternalIdCommonName(commonName));
    extId1.setExternalIdReference(new ExternalIdReference("ext-id-reference-1"));
    extId1.setExternalIdUrl(new ExternalIdUrl("http://test.orcid.org/" + System.currentTimeMillis()));
    extIds.getExternalIdentifier().add(extId1);
    orcidMessage.getOrcidProfile().getOrcidBio().setExternalIdentifiers(extIds);
    t2OrcidApiServiceDelegator.addExternalIdentifiers(mockedUriInfo, "4444-4444-4444-444X", orcidMessage);
}

Example 3 with ExternalIdReference

use of org.orcid.jaxb.model.message.ExternalIdReference in project ORCID-Source by ORCID.

the class T2OrcidApiServiceDelegatorTest method testAddDuplicatedExtIdsWithDifferentClientWorks.

@Test
public void testAddDuplicatedExtIdsWithDifferentClientWorks() {
    String orcid = "0000-0000-0000-0002";
    OrcidMessage message = new OrcidMessage();
    message.setMessageVersion("1.2_rc6");
    message.setOrcidProfile(new OrcidProfile());
    message.getOrcidProfile().setOrcidBio(new OrcidBio());
    ExternalIdentifiers extIds = new ExternalIdentifiers();
    ExternalIdentifier extId1 = new ExternalIdentifier();
    String commonName = "common-name-1-" + System.currentTimeMillis();
    extId1.setExternalIdCommonName(new ExternalIdCommonName(commonName));
    extId1.setExternalIdReference(new ExternalIdReference("ext-id-reference-1"));
    extId1.setExternalIdUrl(new ExternalIdUrl("http://test.orcid.org/" + System.currentTimeMillis()));
    extIds.getExternalIdentifier().add(extId1);
    message.getOrcidProfile().getOrcidBio().setExternalIdentifiers(extIds);
    //Add for client 1
    SecurityContextTestUtils.setUpSecurityContext("0000-0000-0000-0002", "APP-5555555555555555", ScopePathType.PERSON_UPDATE, ScopePathType.PERSON_READ_LIMITED);
    Response r = t2OrcidApiServiceDelegator.addExternalIdentifiers(null, orcid, message);
    assertNotNull(r);
    OrcidMessage newMessage1 = (OrcidMessage) r.getEntity();
    assertNotNull(newMessage1);
    assertNotNull(newMessage1.getOrcidProfile());
    assertNotNull(newMessage1.getOrcidProfile().getOrcidBio());
    assertNotNull(newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers());
    assertNotNull(newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier());
    assertEquals(1, newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().size());
    assertEquals(commonName, newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(0).getExternalIdCommonName().getContent());
    assertEquals("APP-5555555555555555", newMessage1.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(0).getSource().retrieveSourcePath());
    //Reset message for source # 2
    message = new OrcidMessage();
    message.setMessageVersion("1.2_rc6");
    message.setOrcidProfile(new OrcidProfile());
    message.getOrcidProfile().setOrcidBio(new OrcidBio());
    extId1.setSource(null);
    message.getOrcidProfile().getOrcidBio().setExternalIdentifiers(extIds);
    SecurityContextTestUtils.setUpSecurityContext("0000-0000-0000-0002", "APP-5555555555555556", ScopePathType.PERSON_UPDATE, ScopePathType.PERSON_READ_LIMITED);
    r = t2OrcidApiServiceDelegator.addExternalIdentifiers(null, orcid, message);
    OrcidMessage newMessage2 = (OrcidMessage) r.getEntity();
    assertNotNull(newMessage2);
    assertNotNull(newMessage2.getOrcidProfile());
    assertNotNull(newMessage2.getOrcidProfile().getOrcidBio());
    assertNotNull(newMessage2.getOrcidProfile().getOrcidBio().getExternalIdentifiers());
    assertNotNull(newMessage2.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier());
    assertEquals(2, newMessage2.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().size());
    assertEquals(commonName, newMessage2.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(0).getExternalIdCommonName().getContent());
    assertEquals("APP-5555555555555555", newMessage2.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(0).getSource().retrieveSourcePath());
    assertEquals(commonName, newMessage2.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(1).getExternalIdCommonName().getContent());
    assertEquals("APP-5555555555555556", newMessage2.getOrcidProfile().getOrcidBio().getExternalIdentifiers().getExternalIdentifier().get(1).getSource().retrieveSourcePath());
}

Example 4 with ExternalIdReference

use of org.orcid.jaxb.model.message.ExternalIdReference in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method testDefaultVisibilityForItemsAppliedOnUpdate.

@Test
@Transactional
@Rollback(true)
public void testDefaultVisibilityForItemsAppliedOnUpdate() {
    OrcidProfile profile = createBasicProfile();
    OrcidHistory orcidHistory = new OrcidHistory();
    orcidHistory.setClaimed(new Claimed(true));
    orcidHistory.setCreationMethod(CreationMethod.DIRECT);
    orcidHistory.setSubmissionDate(new SubmissionDate(DateUtils.convertToXMLGregorianCalendar(new Date())));
    profile.setOrcidHistory(orcidHistory);
    Keyword k = new Keyword("word", null);
    Keywords kk = new Keywords();
    kk.getKeyword().add(k);
    kk.setVisibility(Visibility.LIMITED);
    ResearcherUrl r = new ResearcherUrl(new Url("http://whatever.com"), null);
    ResearcherUrls rr = new ResearcherUrls();
    rr.getResearcherUrl().add(r);
    rr.setVisibility(Visibility.LIMITED);
    ExternalIdentifier i = new ExternalIdentifier(null);
    i.setExternalIdReference(new ExternalIdReference("ref"));
    i.setExternalIdCommonName(new ExternalIdCommonName("cn"));
    ExternalIdentifiers ii = new ExternalIdentifiers();
    ii.getExternalIdentifier().add(i);
    ii.setVisibility(Visibility.LIMITED);
    OtherNames oo = new OtherNames();
    oo.addOtherName("other", null);
    oo.setVisibility(Visibility.LIMITED);
    profile.getOrcidBio().setKeywords(kk);
    profile.getOrcidBio().setResearcherUrls(rr);
    profile.getOrcidBio().setExternalIdentifiers(ii);
    profile.getOrcidBio().getPersonalDetails().setOtherNames(oo);
    //Create the profile
    profile = orcidProfileManager.createOrcidProfile(profile, true, false);
    Preferences preferences = new Preferences();
    preferences.setSendChangeNotifications(new SendChangeNotifications(true));
    preferences.setSendOrcidNews(new SendOrcidNews(true));
    //Default visibility for user will be LIMITED
    preferences.setActivitiesVisibilityDefault(new ActivitiesVisibilityDefault(Visibility.LIMITED));
    preferences.setNotificationsEnabled(DefaultPreferences.NOTIFICATIONS_ENABLED);
    preferences.setSendEmailFrequencyDays(DefaultPreferences.SEND_EMAIL_FREQUENCY_DAYS);
    preferences.setSendMemberUpdateRequests(DefaultPreferences.SEND_MEMBER_UPDATE_REQUESTS);
    OrcidInternal internal = new OrcidInternal();
    internal.setPreferences(preferences);
    profile.setOrcidInternal(internal);
    profile.getOrcidInternal().getPreferences().setActivitiesVisibilityDefault(new ActivitiesVisibilityDefault(Visibility.LIMITED));
    //Claim the profile
    profile = orcidProfileManager.updateOrcidProfile(profile);
    //now attempt to alter privacy.  It should fail as record has been claimed.
    profile.getOrcidBio().getKeywords().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getResearcherUrls().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getExternalIdentifiers().setVisibility(Visibility.PUBLIC);
    profile.getOrcidBio().getPersonalDetails().getOtherNames().setVisibility(Visibility.PUBLIC);
    profile = orcidProfileManager.updateOrcidProfile(profile);
    assertEquals("word", profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getContent());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getKeywords().getKeyword().iterator().next().getVisibility());
    assertEquals(new Url("http://whatever.com"), profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getUrl());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getResearcherUrls().getResearcherUrl().iterator().next().getVisibility());
    assertEquals("cn", profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getExternalIdCommonName().getContent());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getExternalIdentifiers().getExternalIdentifier().iterator().next().getVisibility());
    assertEquals("other", profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getContent());
    assertEquals(Visibility.LIMITED, profile.getOrcidBio().getPersonalDetails().getOtherNames().getOtherName().iterator().next().getVisibility());
}

Example 5 with ExternalIdReference

use of org.orcid.jaxb.model.message.ExternalIdReference in project ORCID-Source by ORCID.

the class OrcidProfileManagerImplTest method testUpdateOrcidBioKeepTheUserVisibility.

@Test
@Transactional
public void testUpdateOrcidBioKeepTheUserVisibility() {
    OrcidProfile profile = createBasicProfile();
    String orcidIdentifier = null;
    profile.setOrcidIdentifier(orcidIdentifier);
    setBio(profile, Visibility.LIMITED);
    OrcidHistory orcidHistory = new OrcidHistory();
    orcidHistory.setClaimed(new Claimed(true));
    orcidHistory.setCreationMethod(CreationMethod.DIRECT);
    orcidHistory.setSubmissionDate(new SubmissionDate(DateUtils.convertToXMLGregorianCalendar(new Date())));
    profile.setOrcidHistory(orcidHistory);
    Preferences preferences = new Preferences();
    preferences.setSendChangeNotifications(new SendChangeNotifications(true));
    preferences.setSendOrcidNews(new SendOrcidNews(true));
    //Default visibility for user will be LIMITED
    preferences.setActivitiesVisibilityDefault(new ActivitiesVisibilityDefault(Visibility.LIMITED));
    preferences.setNotificationsEnabled(DefaultPreferences.NOTIFICATIONS_ENABLED);
    preferences.setSendEmailFrequencyDays(DefaultPreferences.SEND_EMAIL_FREQUENCY_DAYS);
    preferences.setSendMemberUpdateRequests(DefaultPreferences.SEND_MEMBER_UPDATE_REQUESTS);
    OrcidInternal internal = new OrcidInternal();
    internal.setPreferences(preferences);
    profile.setOrcidInternal(internal);
    profile = orcidProfileManager.createOrcidProfile(profile, true, false);
    //Update it setting it to PUBLIC and check
    profile = orcidProfileManager.retrieveOrcidProfile(profile.getOrcidIdentifier().getPath());
    assertNotNull(profile);
    assertNotNull(profile.getOrcidBio());
    OrcidBio bioToUpdate = profile.getOrcidBio();
    assertEquals(Visibility.LIMITED, bioToUpdate.getBiography().getVisibility());
    assertEquals("This is my biography", bioToUpdate.getBiography().getContent());
    assertEquals(Visibility.LIMITED, bioToUpdate.getContactDetails().getAddress().getCountry().getVisibility());
    assertEquals(Iso3166Country.US, bioToUpdate.getContactDetails().getAddress().getCountry().getValue());
    assertEquals(Visibility.LIMITED, bioToUpdate.getExternalIdentifiers().getVisibility());
    assertEquals(1, bioToUpdate.getExternalIdentifiers().getExternalIdentifier().size());
    assertEquals(Visibility.LIMITED, bioToUpdate.getKeywords().getVisibility());
    assertEquals(1, bioToUpdate.getKeywords().getKeyword().size());
    assertEquals(Visibility.LIMITED, bioToUpdate.getPersonalDetails().getOtherNames().getVisibility());
    assertEquals(1, bioToUpdate.getPersonalDetails().getOtherNames().getOtherName().size());
    assertEquals(Visibility.LIMITED, bioToUpdate.getResearcherUrls().getVisibility());
    assertEquals(1, bioToUpdate.getResearcherUrls().getResearcherUrl().size());
    //Update bio
    bioToUpdate.getBiography().setContent("Updated biography");
    bioToUpdate.getBiography().setVisibility(Visibility.PRIVATE);
    //Update address
    bioToUpdate.getContactDetails().getAddress().getCountry().setValue(Iso3166Country.CR);
    bioToUpdate.getContactDetails().getAddress().getCountry().setVisibility(Visibility.PRIVATE);
    //Update external identifiers
    ExternalIdentifier extId = new ExternalIdentifier();
    extId.setExternalIdCommonName(new ExternalIdCommonName("common-name-2"));
    extId.setExternalIdReference(new ExternalIdReference("ext-id-reference-2"));
    extId.setExternalIdUrl(new ExternalIdUrl("http://orcid.org/ext-id/2"));
    extId.setVisibility(Visibility.PRIVATE);
    bioToUpdate.getExternalIdentifiers().setVisibility(Visibility.PRIVATE);
    bioToUpdate.getExternalIdentifiers().getExternalIdentifier().add(extId);
    //Update keywords
    Keyword k = new Keyword();
    k.setContent("keyword-2");
    k.setVisibility(Visibility.PRIVATE);
    bioToUpdate.getKeywords().getKeyword().add(k);
    bioToUpdate.getKeywords().setVisibility(Visibility.PRIVATE);
    //Update researcher urls
    ResearcherUrl rUrl = new ResearcherUrl();
    rUrl.setUrl(new Url("http://orcid.org/researcher-url-2"));
    rUrl.setUrlName(new UrlName("url-name-2"));
    rUrl.setVisibility(Visibility.PRIVATE);
    bioToUpdate.getResearcherUrls().getResearcherUrl().add(rUrl);
    bioToUpdate.getResearcherUrls().setVisibility(Visibility.PRIVATE);
    //Update other names
    OtherName o = new OtherName();
    o.setContent("other-name-2");
    o.setVisibility(Visibility.PRIVATE);
    bioToUpdate.getPersonalDetails().getOtherNames().getOtherName().add(o);
    bioToUpdate.getPersonalDetails().getOtherNames().setVisibility(Visibility.PRIVATE);
    //Update the biography
    orcidProfileManager.updateOrcidBio(profile);
    //Get the record again and check that visibilities where not updated 
    OrcidProfile updatedProfile = orcidProfileManager.retrieveOrcidProfile(profile.getOrcidIdentifier().getPath());
    assertNotNull(updatedProfile);
    assertNotNull(updatedProfile.getOrcidBio());
    OrcidBio updatedBio = updatedProfile.getOrcidBio();
    assertEquals(Visibility.LIMITED, updatedBio.getBiography().getVisibility());
    assertEquals("Updated biography", updatedBio.getBiography().getContent());
    assertEquals(Visibility.LIMITED, updatedBio.getContactDetails().getAddress().getCountry().getVisibility());
    assertEquals(Iso3166Country.US, updatedBio.getContactDetails().getAddress().getCountry().getValue());
    assertEquals(Visibility.LIMITED, updatedBio.getExternalIdentifiers().getVisibility());
    assertEquals(2, updatedBio.getExternalIdentifiers().getExternalIdentifier().size());
    assertEquals(Visibility.LIMITED, updatedBio.getKeywords().getVisibility());
    assertEquals(2, updatedBio.getKeywords().getKeyword().size());
    assertEquals(Visibility.LIMITED, updatedBio.getPersonalDetails().getOtherNames().getVisibility());
    assertEquals(2, updatedBio.getPersonalDetails().getOtherNames().getOtherName().size());
    assertEquals(Visibility.LIMITED, updatedBio.getResearcherUrls().getVisibility());
    assertEquals(2, updatedBio.getResearcherUrls().getResearcherUrl().size());
}