Examples with PersonalDetails org.orcid.jaxb.model.message.PersonalDetails used on opensource projects

Example 26 with PersonalDetails

use of org.orcid.jaxb.model.message.PersonalDetails in project ORCID-Source by ORCID.

the class OrcidJaxbCopyManagerTest method testUpdateCreditNamePreservingVisibility.

@Test
public void testUpdateCreditNamePreservingVisibility() throws Exception {
    OrcidBio existingOrcidBioProtected = protectedOrcidMessage.getOrcidProfile().getOrcidBio();
    OrcidBio updatedOrcidBioPublic = publicOrcidMessage.getOrcidProfile().getOrcidBio();
    PersonalDetails existingOrcidPersonalDetails = protectedOrcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails();
    PersonalDetails updatedOrcidPersonalDetails = publicOrcidMessage.getOrcidProfile().getOrcidBio().getPersonalDetails();
    // set default of credit to limited on existing and null on updated
    // -should remain as limited and not 'downgrade'
    assertEquals(existingOrcidPersonalDetails.getCreditName().getContent(), "J. S. Carberry");
    assertEquals(Visibility.LIMITED, existingOrcidPersonalDetails.getCreditName().getVisibility());
    updatedOrcidPersonalDetails.setCreditName(new CreditName("Don"));
    updatedOrcidPersonalDetails.getCreditName().setVisibility(Visibility.PRIVATE);
    orcidJaxbCopyManager.copyUpdatedBioToExistingWithVisibility(existingOrcidBioProtected, updatedOrcidBioPublic);
    assertEquals(existingOrcidPersonalDetails.getCreditName().getContent(), "Don");
    assertEquals(Visibility.PRIVATE, existingOrcidPersonalDetails.getCreditName().getVisibility());
    updatedOrcidPersonalDetails.setCreditName(new CreditName("Jimmy"));
    updatedOrcidPersonalDetails.getCreditName().setVisibility(null);
    orcidJaxbCopyManager.copyUpdatedBioToExistingWithVisibility(existingOrcidBioProtected, updatedOrcidBioPublic);
    assertEquals("Don", existingOrcidBioProtected.getPersonalDetails().getCreditName().getContent());
    assertEquals(Visibility.PRIVATE, existingOrcidPersonalDetails.getCreditName().getVisibility());
}

Example 27 with PersonalDetails

use of org.orcid.jaxb.model.message.PersonalDetails in project ORCID-Source by ORCID.

the class OrcidIndexManagerImpl method persistProfileInformationForIndexing.

@Override
@Deprecated
public void persistProfileInformationForIndexing(OrcidProfile orcidProfile) {
    // Check if the profile is locked
    if (orcidProfile.isLocked()) {
        orcidProfile.downgradeToOrcidIdentifierOnly();
    }
    OrcidMessage messageToFilter = new OrcidMessage();
    messageToFilter.setOrcidProfile(orcidProfile);
    OrcidMessage filteredMessage = visibilityFilter.filter(messageToFilter, Visibility.PUBLIC);
    OrcidProfile filteredProfile = filteredMessage.getOrcidProfile();
    OrcidSolrDocument profileIndexDocument = new OrcidSolrDocument();
    profileIndexDocument.setOrcid(filteredProfile.getOrcidIdentifier().getPath());
    OrcidDeprecated orcidDeprecated = filteredProfile.getOrcidDeprecated();
    if (orcidDeprecated != null) {
        profileIndexDocument.setPrimaryRecord(orcidDeprecated.getPrimaryRecord() != null ? orcidDeprecated.getPrimaryRecord().getOrcidIdentifier().getPath() : null);
    }
    OrcidBio orcidBio = filteredProfile.getOrcidBio();
    if (orcidBio != null) {
        PersonalDetails personalDetails = orcidBio.getPersonalDetails();
        boolean persistPersonalDetails = personalDetails != null;
        if (persistPersonalDetails) {
            profileIndexDocument.setFamilyName(personalDetails.getFamilyName() != null ? personalDetails.getFamilyName().getContent() : null);
            profileIndexDocument.setGivenNames(personalDetails.getGivenNames() != null ? personalDetails.getGivenNames().getContent() : null);
            profileIndexDocument.setCreditName(personalDetails.getCreditName() != null ? personalDetails.getCreditName().getContent() : null);
            List<OtherName> otherNames = personalDetails.getOtherNames() != null ? personalDetails.getOtherNames().getOtherName() : null;
            if (otherNames != null && !otherNames.isEmpty()) {
                List<String> names = new ArrayList<String>();
                for (OtherName otherName : otherNames) {
                    names.add(otherName.getContent());
                }
                profileIndexDocument.setOtherNames(names);
            }
        }
        ContactDetails contactDetails = orcidBio.getContactDetails();
        if (contactDetails != null) {
            for (Email email : contactDetails.getEmail()) {
                profileIndexDocument.addEmailAddress(email.getValue());
            }
        }
        ExternalIdentifiers externalIdentifiers = orcidBio.getExternalIdentifiers();
        if (externalIdentifiers != null) {
            List<String> extIdOrcids = new ArrayList<String>();
            List<String> extIdRefs = new ArrayList<String>();
            List<String> extIdOrcidsAndRefs = new ArrayList<String>();
            for (ExternalIdentifier externalIdentifier : externalIdentifiers.getExternalIdentifier()) {
                Source source = externalIdentifier.getSource();
                String sourcePath = null;
                if (source != null) {
                    sourcePath = source.retrieveSourcePath();
                    if (sourcePath != null) {
                        extIdOrcids.add(sourcePath);
                    }
                }
                ExternalIdReference externalIdReference = externalIdentifier.getExternalIdReference();
                if (externalIdReference != null) {
                    extIdRefs.add(externalIdReference.getContent());
                }
                if (NullUtils.noneNull(sourcePath, externalIdReference)) {
                    extIdOrcidsAndRefs.add(sourcePath + "=" + externalIdReference.getContent());
                }
            }
            if (!extIdOrcids.isEmpty()) {
                profileIndexDocument.setExternalIdSources(extIdOrcids);
            }
            if (!extIdRefs.isEmpty()) {
                profileIndexDocument.setExternalIdReferences(extIdRefs);
            }
            if (!extIdOrcidsAndRefs.isEmpty()) {
                profileIndexDocument.setExternalIdSourcesAndReferences(extIdOrcidsAndRefs);
            }
        }
        OrcidActivities orcidActivities = filteredProfile.getOrcidActivities();
        if (orcidActivities != null) {
            // Affiliations affiliations =
            // orcidActivities.getAffiliations();
            // if (affiliations != null) {
            // List<Affiliation> pastInsts = affiliations
            // .getAffiliationsByType(AffiliationType.PAST_INSTITUTION);
            // if (pastInsts != null && !pastInsts.isEmpty()) {
            // List<String> pastInstNames = new ArrayList<String>();
            // for (Affiliation pastAffiliation : pastInsts) {
            // pastInstNames.add(pastAffiliation
            // .getAffiliationName());
            // }
            //
            // profileIndexDocument
            // .setAffiliatePastInstitutionNames(pastInstNames);
            // }
            //
            // List<Affiliation> primaryInsts = affiliations
            // .getAffiliationsByType(AffiliationType.CURRENT_PRIMARY_INSTITUTION);
            // if (primaryInsts != null && !primaryInsts.isEmpty()) {
            // List<String> primaryInstNames = new ArrayList<String>();
            // for (Affiliation primaryAffiliation : primaryInsts) {
            // primaryInstNames.add(primaryAffiliation
            // .getAffiliationName());
            // }
            //
            // profileIndexDocument
            // .setAffiliatePrimaryInstitutionNames(primaryInstNames);
            // }
            //
            // List<Affiliation> currentNonPrimaryInsts = affiliations
            // .getAffiliationsByType(AffiliationType.CURRENT_INSTITUTION);
            // if (currentNonPrimaryInsts != null
            // && !currentNonPrimaryInsts.isEmpty()) {
            // List<String> affiliateInstNames = new ArrayList<String>();
            // for (Affiliation currentAffiliation : currentNonPrimaryInsts)
            // {
            // affiliateInstNames.add(currentAffiliation
            // .getAffiliationName());
            // }
            //
            // profileIndexDocument
            // .setAffiliateInstitutionNames(affiliateInstNames);
            // }
            // }
            List<String> keywords = extractKeywordsAsStringFromBio(orcidBio);
            if (keywords != null) {
                profileIndexDocument.setKeywords(keywords);
            }
        }
        List<OrcidWork> orcidWorks = filteredProfile.retrieveOrcidWorks() != null ? filteredProfile.retrieveOrcidWorks().getOrcidWork() : null;
        if (orcidWorks != null) {
            List<String> workTitles = new ArrayList<String>();
            Map<WorkExternalIdentifierType, List<String>> allExternalIdentifiers = new HashMap<WorkExternalIdentifierType, List<String>>();
            for (OrcidWork orcidWork : orcidWorks) {
                if (orcidWork.getWorkExternalIdentifiers() != null) {
                    for (WorkExternalIdentifier workExternalIdentifier : orcidWork.getWorkExternalIdentifiers().getWorkExternalIdentifier()) {
                        /**
                             * Creates a map that contains all different
                             * external identifiers for the current work
                             * */
                        if (nullSafeCheckForWorkExternalIdentifier(workExternalIdentifier)) {
                            WorkExternalIdentifierType type = workExternalIdentifier.getWorkExternalIdentifierType();
                            if (!allExternalIdentifiers.containsKey(type)) {
                                List<String> content = new ArrayList<String>();
                                content.add(workExternalIdentifier.getWorkExternalIdentifierId().getContent());
                                allExternalIdentifiers.put(type, content);
                            } else {
                                allExternalIdentifiers.get(type).add(workExternalIdentifier.getWorkExternalIdentifierId().getContent());
                            }
                        }
                    }
                }
                if (orcidWork.getWorkTitle() != null) {
                    Title workMainTitle = orcidWork.getWorkTitle().getTitle();
                    Subtitle worksubTitle = orcidWork.getWorkTitle().getSubtitle();
                    TranslatedTitle translatedTitle = orcidWork.getWorkTitle().getTranslatedTitle();
                    if (workMainTitle != null && !StringUtils.isBlank(workMainTitle.getContent())) {
                        workTitles.add(workMainTitle.getContent());
                    }
                    if (worksubTitle != null && !StringUtils.isBlank(worksubTitle.getContent())) {
                        workTitles.add(worksubTitle.getContent());
                    }
                    if (translatedTitle != null && !StringUtils.isBlank(translatedTitle.getContent())) {
                        workTitles.add(translatedTitle.getContent());
                    }
                }
            }
            profileIndexDocument.setWorkTitles(workTitles);
            // Set the list of external identifiers to the document list
            addExternalIdentifiersToIndexDocument(profileIndexDocument, allExternalIdentifiers);
        }
        List<Funding> orcidFundings = filteredProfile.retrieveFundings() != null ? filteredProfile.retrieveFundings().getFundings() : null;
        if (orcidFundings != null) {
            List<String> fundingTitle = new ArrayList<String>();
            for (Funding orcidFunding : orcidFundings) {
                FundingTitle title = orcidFunding.getTitle();
                if (title != null) {
                    if (title.getTitle() != null && !StringUtils.isBlank(title.getTitle().getContent())) {
                        fundingTitle.add(title.getTitle().getContent());
                    }
                    if (title.getTranslatedTitle() != null && StringUtils.isBlank(title.getTranslatedTitle().getContent())) {
                        fundingTitle.add(title.getTranslatedTitle().getContent());
                    }
                }
            }
            profileIndexDocument.setFundingTitles(fundingTitle);
        }
    }
    OrcidMessage orcidMessage = new OrcidMessage();
    orcidMessage.setMessageVersion(OrcidMessage.DEFAULT_VERSION);
    orcidMessage.setOrcidProfile(filteredProfile);
    OrcidHistory orcidHistory = filteredProfile.getOrcidHistory();
    if (orcidHistory != null) {
        LastModifiedDate lastModifiedDate = orcidHistory.getLastModifiedDate();
        if (lastModifiedDate != null) {
            profileIndexDocument.setProfileLastModifiedDate(lastModifiedDate.getValue().toGregorianCalendar().getTime());
        }
        SubmissionDate submissionDate = orcidHistory.getSubmissionDate();
        if (submissionDate != null) {
            profileIndexDocument.setProfileSubmissionDate(submissionDate.getValue().toGregorianCalendar().getTime());
        }
    }
    if (indexPublicProfile) {
        profileIndexDocument.setPublicProfileMessage(orcidMessage.toXmlString());
    }
    solrDao.persist(profileIndexDocument);
}

Example 28 with PersonalDetails

use of org.orcid.jaxb.model.message.PersonalDetails in project ORCID-Source by ORCID.

the class NotificationManagerImpl method deriveEmailFriendlyName.

@Override
public String deriveEmailFriendlyName(OrcidProfile orcidProfile) {
    if (orcidProfile.getOrcidBio() != null && orcidProfile.getOrcidBio().getPersonalDetails() != null) {
        PersonalDetails personalDetails = orcidProfile.getOrcidBio().getPersonalDetails();
        // all...
        if (personalDetails.getCreditName() != null)
            if (!PojoUtil.isEmpty(personalDetails.getCreditName().getContent()))
                return personalDetails.getCreditName().getContent();
        if (personalDetails.getGivenNames() != null) {
            String givenName = personalDetails.getGivenNames().getContent();
            String familyName = personalDetails.getFamilyName() != null && !StringUtils.isBlank(personalDetails.getFamilyName().getContent()) ? " " + personalDetails.getFamilyName().getContent() : "";
            return givenName + familyName;
        }
    }
    return LAST_RESORT_ORCID_USER_EMAIL_NAME;
}

Example 29 with PersonalDetails

use of org.orcid.jaxb.model.message.PersonalDetails in project ORCID-Source by ORCID.

the class OrcidClientGroupManagerImpl method createGroupProfile.

private OrcidProfile createGroupProfile(OrcidClientGroup orcidClientGroup) {
    OrcidProfile orcidProfile = new OrcidProfile();
    orcidProfile.setType(OrcidType.GROUP);
    orcidProfile.setGroupType(orcidClientGroup.getType());
    OrcidHistory orcidHistory = new OrcidHistory();
    orcidProfile.setOrcidHistory(orcidHistory);
    orcidHistory.setClaimed(new Claimed(true));
    orcidHistory.setSubmissionDate(new SubmissionDate(DateUtils.convertToXMLGregorianCalendar(new Date())));
    OrcidBio orcidBio = new OrcidBio();
    orcidProfile.setOrcidBio(orcidBio);
    PersonalDetails personalDetails = new PersonalDetails();
    orcidBio.setPersonalDetails(personalDetails);
    personalDetails.setCreditName(new CreditName(orcidClientGroup.getGroupName()));
    ContactDetails contactDetails = new ContactDetails();
    orcidBio.setContactDetails(contactDetails);
    Email primaryEmail = new Email(orcidClientGroup.getEmail());
    primaryEmail.setVisibility(Visibility.PRIVATE);
    primaryEmail.setVerified(true);
    contactDetails.addOrReplacePrimaryEmail(primaryEmail);
    if (!PojoUtil.isEmpty(orcidClientGroup.getSalesforceId())) {
        OrcidInternal orcidInternal = new OrcidInternal();
        orcidInternal.setSalesforceId(new SalesforceId(orcidClientGroup.getSalesforceId()));
        orcidProfile.setOrcidInternal(orcidInternal);
    }
    return orcidProfile;
}

Example 30 with PersonalDetails

use of org.orcid.jaxb.model.message.PersonalDetails in project ORCID-Source by ORCID.

the class OrcidJaxbCopyManagerImpl method copyUpdatedPersonalDetailsToExistingPreservingVisibility.

@Override
public void copyUpdatedPersonalDetailsToExistingPreservingVisibility(OrcidBio existing, OrcidBio updated) {
    PersonalDetails existingPersonalDetails = existing.getPersonalDetails();
    PersonalDetails updatedPersonalDetails = updated.getPersonalDetails();
    // if no update, nothing to do
    if (updatedPersonalDetails == null) {
        return;
    }
    // compare to
    if (existingPersonalDetails == null) {
        existing.setPersonalDetails(updatedPersonalDetails);
        return;
    }
    // otherwise preserve visibility of other names && credit names
    copyOtherNamesPreservingVisibility(existingPersonalDetails, updatedPersonalDetails);
    copyCreditNamePreservingVisibility(existingPersonalDetails, updatedPersonalDetails);
    if (updatedPersonalDetails.getFamilyName() != null && !PojoUtil.isEmpty(updatedPersonalDetails.getFamilyName().getContent())) {
        existingPersonalDetails.setFamilyName(updatedPersonalDetails.getFamilyName());
    }
    if (updatedPersonalDetails.getGivenNames() != null && !PojoUtil.isEmpty(updatedPersonalDetails.getGivenNames().getContent())) {
        existingPersonalDetails.setGivenNames(updatedPersonalDetails.getGivenNames());
    }
}