Examples with CitationType org.orcid.jaxb.model.v3.dev1.record.CitationType used on opensource projects

Example 1 with CitationType

use of org.orcid.jaxb.model.v3.dev1.record.CitationType in project ORCID-Source by ORCID.

the class MapperFacadeFactory method getWorkMapperFacade.

public MapperFacade getWorkMapperFacade() {
    MapperFactory mapperFactory = new DefaultMapperFactory.Builder().build();
    ConverterFactory converterFactory = mapperFactory.getConverterFactory();
    converterFactory.registerConverter("workExternalIdentifiersConverterId", new JSONWorkExternalIdentifiersConverterV3(norm, localeManager));
    converterFactory.registerConverter("workContributorsConverterId", new JsonOrikaConverter<WorkContributors>());
    ClassMapBuilder<Work, WorkEntity> workClassMap = mapperFactory.classMap(Work.class, WorkEntity.class);
    workClassMap.byDefault();
    workClassMap.field("putCode", "id");
    addV3DateFields(workClassMap);
    registerSourceConverters(mapperFactory, workClassMap);
    workClassMap.field("journalTitle.content", "journalTitle");
    workClassMap.field("workTitle.title.content", "title");
    workClassMap.field("workTitle.translatedTitle.content", "translatedTitle");
    workClassMap.field("workTitle.translatedTitle.languageCode", "translatedTitleLanguageCode");
    workClassMap.field("workTitle.subtitle.content", "subtitle");
    workClassMap.field("shortDescription", "description");
    workClassMap.field("workCitation.workCitationType", "citationType");
    workClassMap.field("workCitation.citation", "citation");
    workClassMap.field("workType", "workType");
    workClassMap.field("publicationDate", "publicationDate");
    workClassMap.fieldMap("workExternalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    workClassMap.field("url.value", "workUrl");
    workClassMap.fieldMap("workContributors", "contributorsJson").converter("workContributorsConverterId").add();
    workClassMap.field("languageCode", "languageCode");
    workClassMap.field("country.value", "iso2Country");
    workClassMap.register();
    ClassMapBuilder<WorkSummary, WorkEntity> workSummaryClassMap = mapperFactory.classMap(WorkSummary.class, WorkEntity.class);
    registerSourceConverters(mapperFactory, workSummaryClassMap);
    workSummaryClassMap.field("putCode", "id");
    workSummaryClassMap.field("title.title.content", "title");
    workSummaryClassMap.field("title.translatedTitle.content", "translatedTitle");
    workSummaryClassMap.field("title.translatedTitle.languageCode", "translatedTitleLanguageCode");
    workSummaryClassMap.field("journalTitle.content", "journalTitle");
    workSummaryClassMap.field("type", "workType");
    workSummaryClassMap.field("publicationDate", "publicationDate");
    workSummaryClassMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    workSummaryClassMap.byDefault();
    workSummaryClassMap.register();
    ClassMapBuilder<WorkSummary, MinimizedWorkEntity> workSummaryMinimizedClassMap = mapperFactory.classMap(WorkSummary.class, MinimizedWorkEntity.class);
    addV3CommonFields(workSummaryMinimizedClassMap);
    registerSourceConverters(mapperFactory, workSummaryMinimizedClassMap);
    workSummaryMinimizedClassMap.field("title.title.content", "title");
    workSummaryMinimizedClassMap.field("title.translatedTitle.content", "translatedTitle");
    workSummaryMinimizedClassMap.field("title.translatedTitle.languageCode", "translatedTitleLanguageCode");
    workSummaryMinimizedClassMap.field("type", "workType");
    workSummaryMinimizedClassMap.field("publicationDate.year.value", "publicationYear");
    workSummaryMinimizedClassMap.field("publicationDate.month.value", "publicationMonth");
    workSummaryMinimizedClassMap.field("publicationDate.day.value", "publicationDay");
    workSummaryMinimizedClassMap.fieldMap("externalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    workSummaryMinimizedClassMap.byDefault();
    workSummaryMinimizedClassMap.register();
    ClassMapBuilder<Work, MinimizedWorkEntity> minimizedWorkClassMap = mapperFactory.classMap(Work.class, MinimizedWorkEntity.class);
    minimizedWorkClassMap.byDefault();
    registerSourceConverters(mapperFactory, minimizedWorkClassMap);
    minimizedWorkClassMap.field("putCode", "id");
    minimizedWorkClassMap.field("journalTitle.content", "journalTitle");
    minimizedWorkClassMap.field("workTitle.title.content", "title");
    minimizedWorkClassMap.field("workTitle.translatedTitle.content", "translatedTitle");
    minimizedWorkClassMap.field("workTitle.translatedTitle.languageCode", "translatedTitleLanguageCode");
    minimizedWorkClassMap.field("workTitle.subtitle.content", "subtitle");
    minimizedWorkClassMap.field("shortDescription", "description");
    minimizedWorkClassMap.field("workType", "workType");
    minimizedWorkClassMap.field("publicationDate.year.value", "publicationYear");
    minimizedWorkClassMap.field("publicationDate.month.value", "publicationMonth");
    minimizedWorkClassMap.field("publicationDate.day.value", "publicationDay");
    minimizedWorkClassMap.fieldMap("workExternalIdentifiers", "externalIdentifiersJson").converter("workExternalIdentifiersConverterId").add();
    minimizedWorkClassMap.field("url.value", "workUrl");
    minimizedWorkClassMap.register();
    mapperFactory.classMap(PublicationDate.class, PublicationDateEntity.class).field("year.value", "year").field("month.value", "month").field("day.value", "day").register();
    return mapperFactory.getMapperFacade();
}

Example 2 with CitationType

use of org.orcid.jaxb.model.v3.dev1.record.CitationType in project ORCID-Source by ORCID.

the class ActivityValidator method validateWork.

public void validateWork(Work work, SourceEntity sourceEntity, boolean createFlag, boolean isApiRequest, Visibility originalVisibility) {
    WorkTitle title = work.getWorkTitle();
    if (title == null || title.getTitle() == null || PojoUtil.isEmpty(title.getTitle().getContent())) {
        throw new ActivityTitleValidationException();
    }
    if (work.getCountry() != null) {
        if (work.getCountry().getValue() == null) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(Iso3166Country.values()).map(element -> element.value()).collect(Collectors.joining(", "));
            params.put("type", "country");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
    }
    // translated title language code
    if (title != null && title.getTranslatedTitle() != null) {
        String translatedTitle = title.getTranslatedTitle().getContent();
        String languageCode = title.getTranslatedTitle().getLanguageCode();
        if (PojoUtil.isEmpty(translatedTitle) && !PojoUtil.isEmpty(languageCode)) {
            throw new OrcidValidationException("Please specify a translated title or remove the language code");
        }
        // If translated title language code is null or invalid
        if (!PojoUtil.isEmpty(translatedTitle) && (PojoUtil.isEmpty(title.getTranslatedTitle().getLanguageCode()) || !Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).anyMatch(title.getTranslatedTitle().getLanguageCode()::equals))) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).collect(Collectors.joining(", "));
            params.put("type", "translated title -> language code");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
    }
    if (work.getWorkType() == null) {
        Map<String, String> params = new HashMap<String, String>();
        String values = Arrays.stream(WorkType.values()).map(element -> element.value()).collect(Collectors.joining(", "));
        params.put("type", "work type");
        params.put("values", values);
        throw new ActivityTypeValidationException(params);
    }
    if (!PojoUtil.isEmpty(work.getLanguageCode())) {
        if (!Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).anyMatch(work.getLanguageCode()::equals)) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).collect(Collectors.joining(", "));
            params.put("type", "language code");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
    }
    // publication date
    if (work.getPublicationDate() != null) {
        PublicationDate pd = work.getPublicationDate();
        Year year = pd.getYear();
        Month month = pd.getMonth();
        Day day = pd.getDay();
        if (year != null) {
            try {
                Integer.valueOf(year.getValue());
            } catch (NumberFormatException n) {
                Map<String, String> params = new HashMap<String, String>();
                params.put("type", "publication date -> year");
                params.put("values", "integers");
                throw new ActivityTypeValidationException(params);
            }
            if (year.getValue().length() != 4) {
                throw new OrcidValidationException("Invalid year " + year.getValue() + " please specify a four digits value");
            }
        }
        if (month != null) {
            try {
                Integer.valueOf(month.getValue());
            } catch (NumberFormatException n) {
                Map<String, String> params = new HashMap<String, String>();
                params.put("type", "publication date -> month");
                params.put("values", "integers");
                throw new ActivityTypeValidationException(params);
            }
            if (month.getValue().length() != 2) {
                throw new OrcidValidationException("Invalid month " + month.getValue() + " please specify a two digits value");
            }
        }
        if (day != null) {
            try {
                Integer.valueOf(day.getValue());
            } catch (NumberFormatException n) {
                Map<String, String> params = new HashMap<String, String>();
                params.put("type", "publication date -> day");
                params.put("values", "integers");
                throw new ActivityTypeValidationException(params);
            }
            if (day.getValue().length() != 2) {
                throw new OrcidValidationException("Invalid day " + day.getValue() + " please specify a two digits value");
            }
        }
        // Check the date is valid
        boolean isYearEmpty = (year == null || year.getValue() == null) ? true : false;
        boolean isMonthEmpty = (month == null || month.getValue() == null) ? true : false;
        boolean isDayEmpty = (day == null || day.getValue() == null) ? true : false;
        if (isYearEmpty && (!isMonthEmpty || !isDayEmpty)) {
            throw new OrcidValidationException("Invalid date, please specify a year element");
        } else if (!isYearEmpty && isMonthEmpty && !isDayEmpty) {
            throw new OrcidValidationException("Invalid date, please specify a month element");
        } else if (isYearEmpty && isMonthEmpty && !isDayEmpty) {
            throw new OrcidValidationException("Invalid date, please specify a year and month elements");
        }
    }
    // citation
    if (work.getWorkCitation() != null) {
        String citation = work.getWorkCitation().getCitation();
        CitationType type = work.getWorkCitation().getWorkCitationType();
        if (type == null) {
            Map<String, String> params = new HashMap<String, String>();
            String values = Arrays.stream(CitationType.values()).map(element -> element.value()).collect(Collectors.joining(", "));
            params.put("type", "citation type");
            params.put("values", values);
            throw new ActivityTypeValidationException(params);
        }
        if (PojoUtil.isEmpty(citation)) {
            throw new OrcidValidationException("Please specify a citation or remove the parent tag");
        }
    }
    if (work.getWorkExternalIdentifiers() == null || work.getWorkExternalIdentifiers().getExternalIdentifier() == null || work.getExternalIdentifiers().getExternalIdentifier().isEmpty()) {
        throw new ActivityIdentifierValidationException();
    }
    if (work.getWorkContributors() != null) {
        WorkContributors contributors = work.getWorkContributors();
        if (!contributors.getContributor().isEmpty()) {
            for (Contributor contributor : contributors.getContributor()) {
                if (contributor.getContributorOrcid() != null) {
                    ContributorOrcid contributorOrcid = contributor.getContributorOrcid();
                    if (!PojoUtil.isEmpty(contributorOrcid.getUri())) {
                        if (!OrcidStringUtils.isValidOrcid2_1Uri(contributorOrcid.getUri())) {
                            throw new OrcidValidationException("Invalid contributor URI");
                        }
                    }
                    if (!PojoUtil.isEmpty(contributorOrcid.getPath())) {
                        if (!OrcidStringUtils.isValidOrcid(contributorOrcid.getPath())) {
                            throw new OrcidValidationException("Invalid contributor ORCID");
                        }
                    }
                }
                if (contributor.getCreditName() != null) {
                    if (PojoUtil.isEmpty(contributor.getCreditName().getContent())) {
                        throw new OrcidValidationException("Please specify a contributor credit name or remove the empty tag");
                    }
                }
                if (contributor.getContributorEmail() != null) {
                    if (PojoUtil.isEmpty(contributor.getContributorEmail().getValue())) {
                        throw new OrcidValidationException("Please specify a contributor email or remove the empty tag");
                    }
                }
            }
        }
    }
    if (work.getPutCode() != null && createFlag) {
        Map<String, String> params = new HashMap<String, String>();
        if (sourceEntity != null) {
            params.put("clientName", sourceEntity.getSourceName());
        }
        throw new InvalidPutCodeException(params);
    }
    // Check that we are not changing the visibility
    if (isApiRequest && !createFlag) {
        Visibility updatedVisibility = work.getVisibility();
        validateVisibilityDoesntChange(updatedVisibility, originalVisibility);
    }
    externalIDValidator.validateWorkOrPeerReview(work.getExternalIdentifiers());
}