use of org.orcid.jaxb.model.v3.dev1.record.Email in project ORCID-Source by ORCID.
the class PublicV3ApiServiceDelegatorTest method validatePerson.
private void validatePerson(Person person) {
assertNotNull(person);
assertNotNull(person.getLastModifiedDate());
assertNotNull(person.getLastModifiedDate().getValue());
assertNotNull(person.getAddresses());
assertEquals("/0000-0000-0000-0003/address", person.getAddresses().getPath());
assertNotNull(person.getAddresses().getLastModifiedDate());
assertNotNull(person.getAddresses().getLastModifiedDate().getValue());
assertEquals(1, person.getAddresses().getAddress().size());
Address address = person.getAddresses().getAddress().get(0);
assertEquals(Iso3166Country.US, address.getCountry().getValue());
assertEquals(Visibility.PUBLIC.value(), address.getVisibility().value());
assertEquals(Long.valueOf(9), address.getPutCode());
assertEquals("/0000-0000-0000-0003/address/9", address.getPath());
assertEquals("APP-5555555555555555", address.getSource().retrieveSourcePath());
assertNotNull(person.getBiography());
assertEquals(Visibility.PUBLIC.value(), person.getBiography().getVisibility().value());
assertEquals("Biography for 0000-0000-0000-0003", person.getBiography().getContent());
assertNotNull(person.getBiography().getLastModifiedDate());
assertNotNull(person.getBiography().getLastModifiedDate().getValue());
assertEquals("/0000-0000-0000-0003/biography", person.getBiography().getPath());
assertNotNull(person.getEmails());
assertNotNull(person.getEmails().getLastModifiedDate());
assertNotNull(person.getEmails().getLastModifiedDate().getValue());
assertEquals(1, person.getEmails().getEmails().size());
Email email = person.getEmails().getEmails().get(0);
assertEquals("public_0000-0000-0000-0003@test.orcid.org", email.getEmail());
assertNotNull(email.getLastModifiedDate());
assertNotNull(email.getLastModifiedDate().getValue());
assertEquals("APP-5555555555555555", email.getSource().retrieveSourcePath());
assertEquals(Visibility.PUBLIC.value(), email.getVisibility().value());
assertNotNull(person.getExternalIdentifiers());
assertNotNull(person.getExternalIdentifiers().getLastModifiedDate());
assertNotNull(person.getExternalIdentifiers().getLastModifiedDate().getValue());
assertEquals("/0000-0000-0000-0003/external-identifiers", person.getExternalIdentifiers().getPath());
assertEquals(1, person.getExternalIdentifiers().getExternalIdentifiers().size());
PersonExternalIdentifier extId = person.getExternalIdentifiers().getExternalIdentifiers().get(0);
assertNotNull(extId);
assertNotNull(extId.getLastModifiedDate());
assertNotNull(extId.getLastModifiedDate().getValue());
assertEquals(Long.valueOf(13), extId.getPutCode());
assertEquals("public_type", extId.getType());
assertNotNull(extId.getUrl());
assertEquals("http://ext-id/public_ref", extId.getUrl().getValue());
assertEquals(Visibility.PUBLIC.value(), extId.getVisibility().value());
assertEquals("/0000-0000-0000-0003/external-identifiers/13", extId.getPath());
assertEquals("APP-5555555555555555", extId.getSource().retrieveSourcePath());
assertNotNull(person.getKeywords());
assertNotNull(person.getKeywords().getLastModifiedDate());
assertNotNull(person.getKeywords().getLastModifiedDate().getValue());
assertEquals(1, person.getKeywords().getKeywords().size());
assertNotNull(person.getKeywords().getLastModifiedDate());
assertEquals("/0000-0000-0000-0003/keywords", person.getKeywords().getPath());
Keyword keyword = person.getKeywords().getKeywords().get(0);
assertNotNull(keyword);
assertNotNull(keyword.getLastModifiedDate());
assertNotNull(keyword.getLastModifiedDate().getValue());
assertEquals(Long.valueOf(9), keyword.getPutCode());
assertEquals("PUBLIC", keyword.getContent());
assertEquals(Visibility.PUBLIC.value(), keyword.getVisibility().value());
assertEquals("/0000-0000-0000-0003/keywords/9", keyword.getPath());
assertEquals("APP-5555555555555555", keyword.getSource().retrieveSourcePath());
assertNotNull(person.getName());
assertNotNull(person.getName().getLastModifiedDate());
assertNotNull(person.getName().getLastModifiedDate().getValue());
assertEquals("Credit Name", person.getName().getCreditName().getContent());
assertEquals("Family Name", person.getName().getFamilyName().getContent());
assertEquals("Given Names", person.getName().getGivenNames().getContent());
assertEquals(Visibility.PUBLIC.value(), person.getName().getVisibility().value());
assertNotNull(person.getOtherNames());
assertEquals("/0000-0000-0000-0003/other-names", person.getOtherNames().getPath());
assertNotNull(person.getOtherNames().getLastModifiedDate());
assertNotNull(person.getOtherNames().getLastModifiedDate().getValue());
assertEquals(1, person.getOtherNames().getOtherNames().size());
OtherName otherName = person.getOtherNames().getOtherNames().get(0);
assertEquals("Other Name PUBLIC", otherName.getContent());
assertNotNull(otherName.getLastModifiedDate());
assertNotNull(otherName.getLastModifiedDate().getValue());
assertEquals("/0000-0000-0000-0003/other-names/13", otherName.getPath());
assertEquals(Long.valueOf(13), otherName.getPutCode());
assertEquals("APP-5555555555555555", otherName.getSource().retrieveSourcePath());
assertEquals(Visibility.PUBLIC.value(), otherName.getVisibility().value());
assertNotNull(person.getResearcherUrls());
assertEquals(1, person.getResearcherUrls().getResearcherUrls().size());
assertNotNull(person.getResearcherUrls().getLastModifiedDate());
assertNotNull(person.getResearcherUrls().getLastModifiedDate().getValue());
assertEquals("/0000-0000-0000-0003/researcher-urls", person.getResearcherUrls().getPath());
ResearcherUrl rUrl = person.getResearcherUrls().getResearcherUrls().get(0);
assertNotNull(rUrl);
assertNotNull(rUrl.getLastModifiedDate());
assertNotNull(rUrl.getLastModifiedDate().getValue());
assertNotNull(rUrl.getUrl());
assertEquals("http://www.researcherurl.com?id=13", rUrl.getUrl().getValue());
assertEquals("public_rurl", rUrl.getUrlName());
assertEquals(Visibility.PUBLIC.value(), rUrl.getVisibility().value());
assertEquals("/0000-0000-0000-0003/researcher-urls/13", rUrl.getPath());
assertEquals("APP-5555555555555555", rUrl.getSource().retrieveSourcePath());
assertEquals("/0000-0000-0000-0003/person", person.getPath());
}
use of org.orcid.jaxb.model.v3.dev1.record.Email in project ORCID-Source by ORCID.
the class PublicV3ApiServiceDelegatorTest method testViewEmails.
@Test
public void testViewEmails() {
Response response = serviceDelegator.viewEmails(ORCID);
assertNotNull(response);
Emails emails = (Emails) response.getEntity();
assertNotNull(emails);
assertNotNull(emails.getLastModifiedDate());
assertNotNull(emails.getLastModifiedDate().getValue());
assertNotNull(emails.getEmails());
assertEquals(1, emails.getEmails().size());
Email email = emails.getEmails().get(0);
assertNotNull(email.getLastModifiedDate());
assertNotNull(email.getLastModifiedDate().getValue());
assertEquals("public_0000-0000-0000-0003@test.orcid.org", email.getEmail());
assertTrue(email.isCurrent());
assertTrue(email.isPrimary());
assertTrue(email.isVerified());
assertEquals(Visibility.PUBLIC.value(), email.getVisibility().value());
assertEquals("/0000-0000-0000-0003/email", emails.getPath());
assertEquals("APP-5555555555555555", email.getSource().retrieveSourcePath());
}
use of org.orcid.jaxb.model.v3.dev1.record.Email in project ORCID-Source by ORCID.
the class PublicAPISecurityManagerV3Test method getEmailsElement.
private Emails getEmailsElement(Visibility... vs) {
Emails elements = new Emails();
for (Visibility v : vs) {
Email element = new Email();
element.setVisibility(v);
if (elements.getEmails() == null) {
elements.setEmails(new ArrayList<Email>());
}
elements.getEmails().add(element);
}
return elements;
}
use of org.orcid.jaxb.model.v3.dev1.record.Email in project ORCID-Source by ORCID.
the class AdminController method lookupIdOrEmails.
@RequestMapping(value = "/lookup-id-or-emails.json", method = RequestMethod.POST)
@ResponseBody
public String lookupIdOrEmails(@RequestBody String csvIdOrEmails) {
List<String> idEmailList = new ArrayList<String>();
StringBuilder builder = new StringBuilder();
if (StringUtils.isNotBlank(csvIdOrEmails)) {
StringTokenizer tokenizer = new StringTokenizer(csvIdOrEmails, INP_STRING_SEPARATOR);
while (tokenizer.hasMoreTokens()) {
idEmailList.add(tokenizer.nextToken());
}
for (String idEmail : idEmailList) {
idEmail = idEmail.trim();
boolean isOrcid = matchesOrcidPattern(idEmail);
String orcid = idEmail;
if (!isOrcid) {
Map<String, String> email = findIdByEmailHelper(idEmail);
orcid = email.get(idEmail);
}
try {
if (profileEntityManager.orcidExists(orcid)) {
Email email = emailManager.findPrimaryEmail(orcid);
if (email != null) {
builder.append(email.getEmail());
} else {
builder.append(OUT_NOT_AVAILABLE);
}
builder.append(OUT_STRING_SEPARATOR).append(orcid);
} else {
if (isOrcid) {
builder.append(OUT_NOT_AVAILABLE).append(OUT_STRING_SEPARATOR).append(idEmail);
} else {
builder.append(idEmail).append(OUT_STRING_SEPARATOR).append(OUT_NOT_AVAILABLE);
}
}
} catch (Exception e) {
// Invalid orcid in the params, so, we can just ignore it
LOGGER.warn("Unable to get info for " + idEmail, e);
}
builder.append(OUT_NEW_LINE);
}
}
return builder.toString();
}
use of org.orcid.jaxb.model.v3.dev1.record.Email in project ORCID-Source by ORCID.
the class ActivityValidator method validateWork.
public void validateWork(Work work, SourceEntity sourceEntity, boolean createFlag, boolean isApiRequest, Visibility originalVisibility) {
WorkTitle title = work.getWorkTitle();
if (title == null || title.getTitle() == null || PojoUtil.isEmpty(title.getTitle().getContent())) {
throw new ActivityTitleValidationException();
}
if (work.getCountry() != null) {
if (work.getCountry().getValue() == null) {
Map<String, String> params = new HashMap<String, String>();
String values = Arrays.stream(Iso3166Country.values()).map(element -> element.value()).collect(Collectors.joining(", "));
params.put("type", "country");
params.put("values", values);
throw new ActivityTypeValidationException(params);
}
}
// translated title language code
if (title != null && title.getTranslatedTitle() != null) {
String translatedTitle = title.getTranslatedTitle().getContent();
String languageCode = title.getTranslatedTitle().getLanguageCode();
if (PojoUtil.isEmpty(translatedTitle) && !PojoUtil.isEmpty(languageCode)) {
throw new OrcidValidationException("Please specify a translated title or remove the language code");
}
// If translated title language code is null or invalid
if (!PojoUtil.isEmpty(translatedTitle) && (PojoUtil.isEmpty(title.getTranslatedTitle().getLanguageCode()) || !Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).anyMatch(title.getTranslatedTitle().getLanguageCode()::equals))) {
Map<String, String> params = new HashMap<String, String>();
String values = Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).collect(Collectors.joining(", "));
params.put("type", "translated title -> language code");
params.put("values", values);
throw new ActivityTypeValidationException(params);
}
}
if (work.getWorkType() == null) {
Map<String, String> params = new HashMap<String, String>();
String values = Arrays.stream(WorkType.values()).map(element -> element.value()).collect(Collectors.joining(", "));
params.put("type", "work type");
params.put("values", values);
throw new ActivityTypeValidationException(params);
}
if (!PojoUtil.isEmpty(work.getLanguageCode())) {
if (!Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).anyMatch(work.getLanguageCode()::equals)) {
Map<String, String> params = new HashMap<String, String>();
String values = Arrays.stream(SiteConstants.AVAILABLE_ISO_LANGUAGES).collect(Collectors.joining(", "));
params.put("type", "language code");
params.put("values", values);
throw new ActivityTypeValidationException(params);
}
}
// publication date
if (work.getPublicationDate() != null) {
PublicationDate pd = work.getPublicationDate();
Year year = pd.getYear();
Month month = pd.getMonth();
Day day = pd.getDay();
if (year != null) {
try {
Integer.valueOf(year.getValue());
} catch (NumberFormatException n) {
Map<String, String> params = new HashMap<String, String>();
params.put("type", "publication date -> year");
params.put("values", "integers");
throw new ActivityTypeValidationException(params);
}
if (year.getValue().length() != 4) {
throw new OrcidValidationException("Invalid year " + year.getValue() + " please specify a four digits value");
}
}
if (month != null) {
try {
Integer.valueOf(month.getValue());
} catch (NumberFormatException n) {
Map<String, String> params = new HashMap<String, String>();
params.put("type", "publication date -> month");
params.put("values", "integers");
throw new ActivityTypeValidationException(params);
}
if (month.getValue().length() != 2) {
throw new OrcidValidationException("Invalid month " + month.getValue() + " please specify a two digits value");
}
}
if (day != null) {
try {
Integer.valueOf(day.getValue());
} catch (NumberFormatException n) {
Map<String, String> params = new HashMap<String, String>();
params.put("type", "publication date -> day");
params.put("values", "integers");
throw new ActivityTypeValidationException(params);
}
if (day.getValue().length() != 2) {
throw new OrcidValidationException("Invalid day " + day.getValue() + " please specify a two digits value");
}
}
// Check the date is valid
boolean isYearEmpty = (year == null || year.getValue() == null) ? true : false;
boolean isMonthEmpty = (month == null || month.getValue() == null) ? true : false;
boolean isDayEmpty = (day == null || day.getValue() == null) ? true : false;
if (isYearEmpty && (!isMonthEmpty || !isDayEmpty)) {
throw new OrcidValidationException("Invalid date, please specify a year element");
} else if (!isYearEmpty && isMonthEmpty && !isDayEmpty) {
throw new OrcidValidationException("Invalid date, please specify a month element");
} else if (isYearEmpty && isMonthEmpty && !isDayEmpty) {
throw new OrcidValidationException("Invalid date, please specify a year and month elements");
}
}
// citation
if (work.getWorkCitation() != null) {
String citation = work.getWorkCitation().getCitation();
CitationType type = work.getWorkCitation().getWorkCitationType();
if (type == null) {
Map<String, String> params = new HashMap<String, String>();
String values = Arrays.stream(CitationType.values()).map(element -> element.value()).collect(Collectors.joining(", "));
params.put("type", "citation type");
params.put("values", values);
throw new ActivityTypeValidationException(params);
}
if (PojoUtil.isEmpty(citation)) {
throw new OrcidValidationException("Please specify a citation or remove the parent tag");
}
}
if (work.getWorkExternalIdentifiers() == null || work.getWorkExternalIdentifiers().getExternalIdentifier() == null || work.getExternalIdentifiers().getExternalIdentifier().isEmpty()) {
throw new ActivityIdentifierValidationException();
}
if (work.getWorkContributors() != null) {
WorkContributors contributors = work.getWorkContributors();
if (!contributors.getContributor().isEmpty()) {
for (Contributor contributor : contributors.getContributor()) {
if (contributor.getContributorOrcid() != null) {
ContributorOrcid contributorOrcid = contributor.getContributorOrcid();
if (!PojoUtil.isEmpty(contributorOrcid.getUri())) {
if (!OrcidStringUtils.isValidOrcid2_1Uri(contributorOrcid.getUri())) {
throw new OrcidValidationException("Invalid contributor URI");
}
}
if (!PojoUtil.isEmpty(contributorOrcid.getPath())) {
if (!OrcidStringUtils.isValidOrcid(contributorOrcid.getPath())) {
throw new OrcidValidationException("Invalid contributor ORCID");
}
}
}
if (contributor.getCreditName() != null) {
if (PojoUtil.isEmpty(contributor.getCreditName().getContent())) {
throw new OrcidValidationException("Please specify a contributor credit name or remove the empty tag");
}
}
if (contributor.getContributorEmail() != null) {
if (PojoUtil.isEmpty(contributor.getContributorEmail().getValue())) {
throw new OrcidValidationException("Please specify a contributor email or remove the empty tag");
}
}
}
}
}
if (work.getPutCode() != null && createFlag) {
Map<String, String> params = new HashMap<String, String>();
if (sourceEntity != null) {
params.put("clientName", sourceEntity.getSourceName());
}
throw new InvalidPutCodeException(params);
}
// Check that we are not changing the visibility
if (isApiRequest && !createFlag) {
Visibility updatedVisibility = work.getVisibility();
validateVisibilityDoesntChange(updatedVisibility, originalVisibility);
}
externalIDValidator.validateWorkOrPeerReview(work.getExternalIdentifiers());
}
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